ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 349 5e-93
2gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome... 349 5e-93
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 349 5e-93
4gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome... 349 5e-93
5dbj|AK122024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 1e-90
6gb|AY129086.1| Lettuce mosaic virus polyprotein mRNA, partial cds 46 0.10
7gb|AF369020.1|AF369020 Lettuce mosaic virus LMV-Tn23.1 polyprote... 46 0.10
8gb|AF368982.1|AF368982 Lettuce mosaic virus LMV-TnOL2 polyprotei... 46 0.10
9dbj|D21877.1|SUHNAPH Hemicentrotus pulcherrimus mRNA for Nucleos... 46 0.10
10ref|XM_513683.1| PREDICTED: Pan troglodytes similar to TTF2 prot... 44 0.40
11ref|XM_456896.1| Debaryomyces hansenii CBS767 hypothetical prote... 44 0.40
12gb|BC015341.1| Homo sapiens transcription termination factor, RN... 44 0.40
13gb|BC030058.1| Homo sapiens transcription termination factor, RN... 44 0.40
14ref|NM_003594.3| Homo sapiens transcription termination factor, ... 44 0.40
15emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on ch... 44 0.40
16emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS... 44 0.40
17gb|AF080255.1|AF080255 Homo sapiens lodestar protein mRNA, compl... 44 0.40
18gb|AF073771.1|AF073771 Homo sapiens RNA polymerase II terminatio... 44 0.40
19ref|NM_111099.3| Arabidopsis thaliana RNA binding / S-adenosylme... 42 1.6
20gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosom... 42 1.6
21gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC... 42 1.6
22gb|AC164314.5| Mus musculus BAC clone RP23-17J18 from chromosome... 42 1.6
23gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 1.6
24gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BAC F11... 42 1.6
25dbj|AK175448.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 1.6
26dbj|AK175413.1| Arabidopsis thaliana mRNA for hypothetical prote... 42 1.6
27emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chro... 42 1.6
28ref|NM_115490.3| Arabidopsis thaliana nucleic acid binding / nuc... 40 6.3
29ref|NM_101190.2| Arabidopsis thaliana protein binding / ubiquiti... 40 6.3
30gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome 40 6.3
31ref|XM_416513.1| PREDICTED: Gallus gallus similar to Ubiquitin c... 40 6.3
32gb|AE006553.1| Streptococcus pyogenes M1 GAS, section 82 of 167 ... 40 6.3
33gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome 40 6.3
34gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome 40 6.3
35gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome 40 6.3
36gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete s... 40 6.3
37gb|BC041737.1| Xenopus laevis eukaryotic initiation factor 5 (eI... 40 6.3
38gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete seq... 40 6.3
39gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome 40 6.3
40gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete s... 40 6.3
41ref|XM_779500.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
42ref|XM_782577.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.3
43gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
44emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, B... 40 6.3
45gb|BT008327.1| Arabidopsis thaliana At3g56320 gene, complete cds 40 6.3
46emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chr... 40 6.3
47ref|NM_136611.2| Drosophila melanogaster Mystery 45A CG8070-RA (... 40 6.3
48gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
49gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete s... 40 6.3
50gb|AY070560.1| Drosophila melanogaster LD33051 full length cDNA 40 6.3
51gb|AF173549.1|AF173549 Drosophila melanogaster mystery 45A mRNA,... 40 6.3
52gb|AF325922.1|AF325922 Takifugu rubripes omega class glutathione... 40 6.3
53gb|BT024484.1| Arabidopsis thaliana At1g13195 mRNA, complete cds 40 6.3
54gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45... 40 6.3
55ref|NM_068573.3| Caenorhabditis elegans Suppressor with Morpholo... 40 6.3
56gb|AF368958.1|AF368958 Lettuce mosaic virus LMV-Br6 polyprotein ... 40 6.3
57gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, r... 40 6.3
58gb|AY087531.1| Arabidopsis thaliana clone 36399 mRNA, complete s... 40 6.3
59gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Can... 40 6.3
60gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 ... 40 6.3
61gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 40 6.3
62gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 6.3
63gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, r... 40 6.3
64dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.3
65emb|AL929158.8| Mouse DNA sequence from clone RP23-92O15 on chro... 40 6.3
66emb|X76639.1|ML16SLR2 M.lieberkuehni (mx19) gene for 16S-like ri... 40 6.3
67emb|X76638.1|ML16SLR1 M.lieberkuehni (mx18) gene for 16S-like ri... 40 6.3 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  349 bits (176), Expect = 5e-93
 Identities = 371/435 (85%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                           
Query: 33      cttgtggacgaggaggaagatgatgttgccacggatgagccggttgttcgacaaccggtt 92
               |||||||||||||||||||| |||||||  | |||||||  ||||||||| || ||  ||
Sbjct: 3841963 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 3842022

                                                                           
Query: 93      gctggagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 152
               || | || ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3842023 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 3842082

                                                                           
Query: 153     gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 212
               |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 3842083 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 3842142

                                                                           
Query: 213     gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 272
               || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 3842143 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 3842202

                                                                           
Query: 273     gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 332
               || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 3842203 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 3842262

                                                                           
Query: 333     tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgncaggaaa 392
               |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 3842263 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 3842322

                                                                           
Query: 393     gaaccacatgcactgctggaat-caatgtaaaatctacagagcttggtccatcttctcat 451
               |||||||| || |||||||||| || |||||| ||| |||| | ||| ||||||||||||
Sbjct: 3842323 gaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcat 3842382

                              
Query: 452     ggtattctcatgtct 466
               |||||||| ||||||
Sbjct: 3842383 ggtattcttatgtct 3842397



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 145     cgttgcctgctcatcttgggcttg 168
               |||||||||||||| |||||||||
Sbjct: 5028687 cgttgcctgctcattttgggcttg 5028664
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>gb|AC144491.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0091P11,
              complete sequence
          Length = 132151

 Score =  349 bits (176), Expect = 5e-93
 Identities = 371/435 (85%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                          
Query: 33     cttgtggacgaggaggaagatgatgttgccacggatgagccggttgttcgacaaccggtt 92
              |||||||||||||||||||| |||||||  | |||||||  ||||||||| || ||  ||
Sbjct: 120587 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 120646

                                                                          
Query: 93     gctggagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 152
              || | || ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 120647 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 120706

                                                                          
Query: 153    gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 212
              |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 120707 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 120766

                                                                          
Query: 213    gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 272
              || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 120767 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 120826

                                                                          
Query: 273    gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 332
              || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 120827 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 120886

                                                                          
Query: 333    tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgncaggaaa 392
              |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 120887 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 120946

                                                                          
Query: 393    gaaccacatgcactgctggaat-caatgtaaaatctacagagcttggtccatcttctcat 451
              |||||||| || |||||||||| || |||||| ||| |||| | ||| ||||||||||||
Sbjct: 120947 gaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcat 121006

                             
Query: 452    ggtattctcatgtct 466
              |||||||| ||||||
Sbjct: 121007 ggtattcttatgtct 121021
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  349 bits (176), Expect = 5e-93
 Identities = 371/435 (85%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                           
Query: 33      cttgtggacgaggaggaagatgatgttgccacggatgagccggttgttcgacaaccggtt 92
               |||||||||||||||||||| |||||||  | |||||||  ||||||||| || ||  ||
Sbjct: 3842074 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 3842133

                                                                           
Query: 93      gctggagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 152
               || | || ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 3842134 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 3842193

                                                                           
Query: 153     gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 212
               |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 3842194 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 3842253

                                                                           
Query: 213     gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 272
               || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 3842254 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 3842313

                                                                           
Query: 273     gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 332
               || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 3842314 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 3842373

                                                                           
Query: 333     tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgncaggaaa 392
               |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 3842374 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 3842433

                                                                           
Query: 393     gaaccacatgcactgctggaat-caatgtaaaatctacagagcttggtccatcttctcat 451
               |||||||| || |||||||||| || |||||| ||| |||| | ||| ||||||||||||
Sbjct: 3842434 gaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcat 3842493

                              
Query: 452     ggtattctcatgtct 466
               |||||||| ||||||
Sbjct: 3842494 ggtattcttatgtct 3842508



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 145     cgttgcctgctcatcttgggcttg 168
               |||||||||||||| |||||||||
Sbjct: 5027902 cgttgcctgctcattttgggcttg 5027879
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>gb|AC126221.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0015N19, complete sequence
          Length = 168430

 Score =  349 bits (176), Expect = 5e-93
 Identities = 371/435 (85%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                         
Query: 33    cttgtggacgaggaggaagatgatgttgccacggatgagccggttgttcgacaaccggtt 92
             |||||||||||||||||||| |||||||  | |||||||  ||||||||| || ||  ||
Sbjct: 48436 cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctatt 48495

                                                                         
Query: 93    gctggagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 152
             || | || ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 48496 gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 48555

                                                                         
Query: 153   gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 212
             |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 48556 gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 48615

                                                                         
Query: 213   gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 272
             || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 48616 gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 48675

                                                                         
Query: 273   gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 332
             || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 48676 gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 48735

                                                                         
Query: 333   tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgncaggaaa 392
             |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 48736 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 48795

                                                                         
Query: 393   gaaccacatgcactgctggaat-caatgtaaaatctacagagcttggtccatcttctcat 451
             |||||||| || |||||||||| || |||||| ||| |||| | ||| ||||||||||||
Sbjct: 48796 gaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcat 48855

                            
Query: 452   ggtattctcatgtct 466
             |||||||| ||||||
Sbjct: 48856 ggtattcttatgtct 48870
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>dbj|AK122024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111P14, full
            insert sequence
          Length = 3941

 Score =  341 bits (172), Expect = 1e-90
 Identities = 370/435 (85%), Gaps = 1/435 (0%)
 Strand = Plus / Plus

                                                                        
Query: 33   cttgtggacgaggaggaagatgatgttgccacggatgagccggttgttcgacaaccggtt 92
            |||||||||||||||||||| |||||||  | |||||||  ||||||||  || ||  ||
Sbjct: 713  cttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcagcagcctatt 772

                                                                        
Query: 93   gctggagcaagagacccacctccaaatgggcatgagctggagctttcgcattcgttgcct 152
            || | || ||||||||||||| ||||||| ||||||||||||||||| | ||||||||||
Sbjct: 773  gcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcct 832

                                                                        
Query: 153  gctcatcttgggcttgaccctgcaaagatgcaggaaatgcggatggcattgtttcccaat 212
            |||||||||||||||||||||||||||||||| |||||||||||| |  ||||  |||||
Sbjct: 833  gctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaat 892

                                                                        
Query: 213  gatgaagaagacgaagatatggaggatggctttccatctgatcacagacacctcagcaga 272
            || ||||  || ||||||||||||||||| || ||||||||||| ||| || ||||||| 
Sbjct: 893  gaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagt 952

                                                                        
Query: 273  gaaaggatgaatgtggattcacccaacacaagtggtaaaggtcagaggatgaggtctctg 332
            || | |||||||||||||||||| ||| |||||| |||||||  |||| | |||||||| 
Sbjct: 953  gagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctc 1012

                                                                        
Query: 333  tctcctttgcatggttcttctcagaaatttggaaggagatctggtgtgcttgncaggaaa 392
            |||||||||||||||||||||| |||| |  | |||||| |||||||  |||  |||| |
Sbjct: 1013 tctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggaga 1072

                                                                        
Query: 393  gaaccacatgcactgctggaat-caatgtaaaatctacagagcttggtccatcttctcat 451
            |||||||| || |||||||||| || |||||| ||| |||| | ||| ||||||||||||
Sbjct: 1073 gaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcat 1132

                           
Query: 452  ggtattctcatgtct 466
            |||||||| ||||||
Sbjct: 1133 ggtattcttatgtct 1147
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>gb|AY129086.1| Lettuce mosaic virus polyprotein mRNA, partial cds
          Length = 278

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 caatgatgaagaagacgaagatatgga 235
           |||||||||||||||||| ||||||||
Sbjct: 99  caatgatgaagaagacgacgatatgga 125
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>gb|AF369020.1|AF369020 Lettuce mosaic virus LMV-Tn23.1 polyprotein gene, partial cds
          Length = 216

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 caatgatgaagaagacgaagatatgga 235
           |||||||||||||||||| ||||||||
Sbjct: 57  caatgatgaagaagacgacgatatgga 83
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>gb|AF368982.1|AF368982 Lettuce mosaic virus LMV-TnOL2 polyprotein gene, partial cds
          Length = 216

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 209 caatgatgaagaagacgaagatatgga 235
           |||||||||||||||||| ||||||||
Sbjct: 57  caatgatgaagaagacgacgatatgga 83
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>dbj|D21877.1|SUHNAPH Hemicentrotus pulcherrimus mRNA for Nucleosome assembly protein
           homologue, complete cds
          Length = 3412

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 216 gaagaagacgaagatatggagga 238
           |||||||||||||||||||||||
Sbjct: 546 gaagaagacgaagatatggagga 568
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>ref|XM_513683.1| PREDICTED: Pan troglodytes similar to TTF2 protein (LOC457157), mRNA
          Length = 3307

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1183 gacgaggaggaagatgatgttg 1204
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>ref|XM_456896.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0A13475g)
            partial mRNA
          Length = 2283

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 213  gatgaagaagacgaagatatggagga 238
            |||||||||||||||||| |||||||
Sbjct: 1768 gatgaagaagacgaagatctggagga 1793
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>gb|BC015341.1| Homo sapiens transcription termination factor, RNA polymerase II,
            mRNA (cDNA clone IMAGE:4431381), containing frame-shift
            errors
          Length = 1873

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1064 gacgaggaggaagatgatgttg 1085
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>gb|BC030058.1| Homo sapiens transcription termination factor, RNA polymerase II,
            mRNA (cDNA clone MGC:39244 IMAGE:5457833), complete cds
          Length = 2628

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1061 gacgaggaggaagatgatgttg 1082
to top
>ref|NM_003594.3| Homo sapiens transcription termination factor, RNA polymerase II
            (TTF2), mRNA
          Length = 4860

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1077 gacgaggaggaagatgatgttg 1098
to top
>emb|AL391476.20| Human DNA sequence from clone RP11-229A19 on chromosome 1 Contains the
             3' end of the TTF2 gene for RNA polymerase II
             transcription termination factor, the TRIM45 gene for
             tripartite motif-containing 45, a ribosomal protein S15a
             (RPS15A) pseudogene, the gene for immune costimulatory
             protein B7-H4 and a CpG island, complete sequence
          Length = 171595

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    gacgaggaggaagatgatgttg 60
             ||||||||||||||||||||||
Sbjct: 12703 gacgaggaggaagatgatgttg 12724
to top
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces
               hansenii
          Length = 1249565

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 213     gatgaagaagacgaagatatggagga 238
               |||||||||||||||||| |||||||
Sbjct: 1096018 gatgaagaagacgaagatctggagga 1096043
to top
>gb|AF080255.1|AF080255 Homo sapiens lodestar protein mRNA, complete cds
          Length = 4629

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1087 gacgaggaggaagatgatgttg 1108
to top
>gb|AF073771.1|AF073771 Homo sapiens RNA polymerase II termination factor mRNA, complete cds
          Length = 3612

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 39   gacgaggaggaagatgatgttg 60
            ||||||||||||||||||||||
Sbjct: 1077 gacgaggaggaagatgatgttg 1098
to top
>ref|NM_111099.3| Arabidopsis thaliana RNA binding / S-adenosylmethionine-dependent
           methyltransferase/ tRNA (guanine-N2-)-methyltransferase
           AT3G02320 mRNA, complete cds
          Length = 2129

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 tacagagcttggtccatcttc 447
           |||||||||||||||||||||
Sbjct: 472 tacagagcttggtccatcttc 452
to top
>gb|AC126433.3| Mus musculus BAC clone RP24-468I23 from chromosome 17, complete
             sequence
          Length = 165036

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   tggaaggagatctggtgtgct 382
             |||||||||||||||||||||
Sbjct: 97823 tggaaggagatctggtgtgct 97843
to top
>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
            complete sequence
          Length = 94369

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 427  tacagagcttggtccatcttc 447
            |||||||||||||||||||||
Sbjct: 3972 tacagagcttggtccatcttc 3992
to top
>gb|AC164314.5| Mus musculus BAC clone RP23-17J18 from chromosome 17, complete sequence
          Length = 212588

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 362   tggaaggagatctggtgtgct 382
             |||||||||||||||||||||
Sbjct: 76950 tggaaggagatctggtgtgct 76970
to top
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 210     aatgatgaagaagacgaagat 230
               |||||||||||||||||||||
Sbjct: 3007084 aatgatgaagaagacgaagat 3007104
to top
>gb|AC068900.3|AC068900 Arabidopsis thaliana chromosome 3 BAC F11A12 genomic sequence,
            complete sequence
          Length = 22087

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 427  tacagagcttggtccatcttc 447
            |||||||||||||||||||||
Sbjct: 1440 tacagagcttggtccatcttc 1420
to top
>dbj|AK175448.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL21-87-M20
          Length = 2057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 tacagagcttggtccatcttc 447
           |||||||||||||||||||||
Sbjct: 472 tacagagcttggtccatcttc 452
to top
>dbj|AK175413.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL21-85-A05
          Length = 2057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 427 tacagagcttggtccatcttc 447
           |||||||||||||||||||||
Sbjct: 472 tacagagcttggtccatcttc 452
to top
>emb|AL845285.5| Mouse DNA sequence from clone RP23-167M2 on chromosome 2, complete
             sequence
          Length = 143280

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 265   tcagcagagaaaggatgaatgtgga 289
             |||| ||||||||||||||||||||
Sbjct: 53541 tcagaagagaaaggatgaatgtgga 53565
to top
>ref|NM_115490.3| Arabidopsis thaliana nucleic acid binding / nucleotidyltransferase
           AT3G56320 mRNA, complete cds
          Length = 2828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 atgatgaagaagacgaagat 230
           ||||||||||||||||||||
Sbjct: 368 atgatgaagaagacgaagat 349
to top
>ref|NM_101190.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT1G13195 mRNA, complete cds
          Length = 1721

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 gatgaagaagacgaagatat 232
           ||||||||||||||||||||
Sbjct: 282 gatgaagaagacgaagatat 263
to top
>gb|CP000017.1| Streptococcus pyogenes MGAS5005, complete genome
          Length = 1838554

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 812431 ttctcagaaatttggaagga 812412
to top
>ref|XM_416513.1| PREDICTED: Gallus gallus similar to Ubiquitin carboxyl-terminal
           hydrolase 5 (Ubiquitin thiolesterase 5)
           (Ubiquitin-specific processing protease 5)
           (Deubiquitinating enzyme 5) (Isopeptidase T)
           (LOC418290), mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 cacagacacctcagcagaga 274
           ||||||||||||||||||||
Sbjct: 360 cacagacacctcagcagaga 341
to top
>gb|AE006553.1| Streptococcus pyogenes M1 GAS, section 82 of 167 of the complete
           genome
          Length = 13576

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 350 ttctcagaaatttggaagga 369
           ||||||||||||||||||||
Sbjct: 129 ttctcagaaatttggaagga 110
to top
>gb|CP000262.1| Streptococcus pyogenes MGAS10750, complete genome
          Length = 1937111

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 918350 ttctcagaaatttggaagga 918331
to top
>gb|CP000261.1| Streptococcus pyogenes MGAS2096, complete genome
          Length = 1860355

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 857126 ttctcagaaatttggaagga 857107
to top
>gb|CP000259.1| Streptococcus pyogenes MGAS9429, complete genome
          Length = 1836467

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 896353 ttctcagaaatttggaagga 896334
to top
>gb|AC135101.24| Medicago truncatula clone mth2-18a18, complete sequence
          Length = 121741

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    ggacgaggaggaagatgatg 57
             ||||||||||||||||||||
Sbjct: 23956 ggacgaggaggaagatgatg 23975
to top
>gb|BC041737.1| Xenopus laevis eukaryotic initiation factor 5 (eIF-5), mRNA (cDNA
            clone MGC:52788 IMAGE:4724643), complete cds
          Length = 1767

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   ggacgaggaggaagatgatg 57
            ||||||||||||||||||||
Sbjct: 1574 ggacgaggaggaagatgatg 1593
to top
>gb|AC146548.11| Medicago truncatula clone mth2-2p3, complete sequence
          Length = 129327

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   atggttcttctcagaaattt 362
             ||||||||||||||||||||
Sbjct: 34187 atggttcttctcagaaattt 34206
to top
>gb|CP000056.1| Streptococcus pyogenes MGAS6180, complete genome
          Length = 1897573

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 814909 ttctcagaaatttggaagga 814890
to top
>gb|AC140031.22| Medicago truncatula clone mth2-24d16, complete sequence
          Length = 114611

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    ggacgaggaggaagatgatg 57
             ||||||||||||||||||||
Sbjct: 85251 ggacgaggaggaagatgatg 85232
to top
>ref|XM_779500.1| PREDICTED: Strongylocentrotus purpuratus similar to brefeldin
           A-inhibited guanine nucleotide-exchange protein 1
           (LOC579380), partial mRNA
          Length = 1108

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 177 aagatgcaggaaatgcggatggca 200
           ||||||||||| ||||||||||||
Sbjct: 128 aagatgcaggagatgcggatggca 105
to top
>ref|XM_782577.1| PREDICTED: Strongylocentrotus purpuratus similar to brefeldin
           A-inhibited guanine nucleotide-exchange protein 1
           (LOC582633), mRNA
          Length = 1419

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 177 aagatgcaggaaatgcggatggca 200
           ||||||||||| ||||||||||||
Sbjct: 611 aagatgcaggagatgcggatggca 588
to top
>gb|AC145480.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNAa0064E16, from chromosome 3, complete sequence
          Length = 139123

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 145   cgttgcctgctcatcttgggcttg 168
             |||||||||||||| |||||||||
Sbjct: 93141 cgttgcctgctcattttgggcttg 93118
to top
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21
          Length = 99492

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   atgatgaagaagacgaagat 230
             ||||||||||||||||||||
Sbjct: 91510 atgatgaagaagacgaagat 91529
to top
>gb|BT008327.1| Arabidopsis thaliana At3g56320 gene, complete cds
          Length = 1812

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 211 atgatgaagaagacgaagat 230
           ||||||||||||||||||||
Sbjct: 55  atgatgaagaagacgaagat 36
to top
>emb|AL929418.14| Mouse DNA sequence from clone RP23-268M1 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 93419

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   acagacacctcagcagagaa 275
             ||||||||||||||||||||
Sbjct: 90667 acagacacctcagcagagaa 90686
to top
>ref|NM_136611.2| Drosophila melanogaster Mystery 45A CG8070-RA (Mys45A), mRNA
          Length = 2391

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  atgatgaagaagacgaagat 230
            ||||||||||||||||||||
Sbjct: 1638 atgatgaagaagacgaagat 1657
to top
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 145    cgttgcctgctcatcttgggcttg 168
              |||||||||||||| |||||||||
Sbjct: 141020 cgttgcctgctcattttgggcttg 141043
to top
>gb|AC084197.1| Caenorhabditis elegans cosmid Y73B6BL, complete sequence
          Length = 216143

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   atgatgaagaagacgaagat 230
             ||||||||||||||||||||
Sbjct: 82912 atgatgaagaagacgaagat 82893
to top
>gb|AY070560.1| Drosophila melanogaster LD33051 full length cDNA
          Length = 2390

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  atgatgaagaagacgaagat 230
            ||||||||||||||||||||
Sbjct: 1623 atgatgaagaagacgaagat 1642
to top
>gb|AF173549.1|AF173549 Drosophila melanogaster mystery 45A mRNA, complete cds
          Length = 2139

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  atgatgaagaagacgaagat 230
            ||||||||||||||||||||
Sbjct: 1556 atgatgaagaagacgaagat 1575
to top
>gb|AF325922.1|AF325922 Takifugu rubripes omega class glutathione-S-transferase, PTEN,
             3'-phosphoadenosine 5'-phosphosulfate synthase 2, multiple
             inositol polyphosphate phosphatase 1, and hypothetical
             protein genes, complete cds; and multiple inositol
             polyphosphate phosphatase 2 gene, partial cds
          Length = 55902

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   agcttggtccatcttctcat 451
             ||||||||||||||||||||
Sbjct: 24538 agcttggtccatcttctcat 24519
to top
>gb|BT024484.1| Arabidopsis thaliana At1g13195 mRNA, complete cds
          Length = 783

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 gatgaagaagacgaagatat 232
           ||||||||||||||||||||
Sbjct: 38  gatgaagaagacgaagatat 19
to top
>gb|AC093049.1| Drosophila melanogaster, chromosome 2R, region 45A-45A, BAC clone
             BACR08E17, complete sequence
          Length = 178262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   atgatgaagaagacgaagat 230
             ||||||||||||||||||||
Sbjct: 10091 atgatgaagaagacgaagat 10110
to top
>ref|NM_068573.3| Caenorhabditis elegans Suppressor with Morphological effect on
            Genitalia family member (smg-3) (smg-3) mRNA, complete
            cds
          Length = 3686

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  atgatgaagaagacgaagat 230
            ||||||||||||||||||||
Sbjct: 2786 atgatgaagaagacgaagat 2805
to top
>gb|AF368958.1|AF368958 Lettuce mosaic virus LMV-Br6 polyprotein gene, partial cds
          Length = 216

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 208 ccaatgatgaagaagacgaagatatgga 235
           ||||||||||||| ||||| ||||||||
Sbjct: 56  ccaatgatgaagacgacgacgatatgga 83
to top
>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
             BACR10M14, complete sequence
          Length = 189757

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   atgatgaagaagacgaagat 230
             ||||||||||||||||||||
Sbjct: 39959 atgatgaagaagacgaagat 39940
to top
>gb|AY087531.1| Arabidopsis thaliana clone 36399 mRNA, complete sequence
          Length = 1213

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 gatgaagaagacgaagatat 232
           ||||||||||||||||||||
Sbjct: 273 gatgaagaagacgaagatat 254
to top
>gb|AC130403.3| Homo sapiens 12 BAC RP11-674N14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 195432

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    ccatcttctcatggtattct 459
              ||||||||||||||||||||
Sbjct: 122385 ccatcttctcatggtattct 122404
to top
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence
          Length = 99758

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   gatgaagaagacgaagatat 232
             ||||||||||||||||||||
Sbjct: 75999 gatgaagaagacgaagatat 76018
to top
>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
             sequence
          Length = 243313

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 211   atgatgaagaagacgaagat 230
             ||||||||||||||||||||
Sbjct: 46801 atgatgaagaagacgaagat 46782
to top
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     atgatgaagaagacgaagat 230
               ||||||||||||||||||||
Sbjct: 1914293 atgatgaagaagacgaagat 1914274
to top
>gb|AC006074.1|AC006074 Drosophila melanogaster, chromosome 2R, region 44F12-45A4, P1 clones
            DS05998, DS07727, DS05175, and DS01885, complete sequence
          Length = 204617

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  atgatgaagaagacgaagat 230
            ||||||||||||||||||||
Sbjct: 1903 atgatgaagaagacgaagat 1922
to top
>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133,
             complete sequence
          Length = 106411

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    gacgaggaggaagatgatgt 58
             ||||||||||||||||||||
Sbjct: 42474 gacgaggaggaagatgatgt 42493
to top
>emb|AL929158.8| Mouse DNA sequence from clone RP23-92O15 on chromosome 2, complete
              sequence
          Length = 125262

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttctcagaaatttggaagga 369
              ||||||||||||||||||||
Sbjct: 118809 ttctcagaaatttggaagga 118790
to top
>emb|X76639.1|ML16SLR2 M.lieberkuehni (mx19) gene for 16S-like ribosomal RNA
          Length = 2085

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  tgctggaatcaatgtaaaat 425
            ||||||||||||||||||||
Sbjct: 1997 tgctggaatcaatgtaaaat 2016
to top
>emb|X76638.1|ML16SLR1 M.lieberkuehni (mx18) gene for 16S-like ribosomal RNA
          Length = 2084

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 406  tgctggaatcaatgtaaaat 425
            ||||||||||||||||||||
Sbjct: 1996 tgctggaatcaatgtaaaat 2015


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,835,364
Number of Sequences: 3902068
Number of extensions: 4835364
Number of successful extensions: 105070
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104745
Number of HSP's gapped (non-prelim): 319
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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