ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MCM7_XENLA (Q91876) DNA replication licensing factor MCM7 (CDC47... 31 0.94
2HEMA_CVMA5 (P31615) Hemagglutinin-esterase precursor (EC 3.1.1.5... 28 4.6

>MCM7_XENLA (Q91876) DNA replication licensing factor MCM7 (CDC47 homolog)|
           (x.MCM7)
          Length = 720

 Score = 30.8 bits (68), Expect = 0.94
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 131 NSPFSAGSEPHPLHGRDSSLKTVEGNLQAAAAMASRF 241
           N+  S  +  +P +GR +  KTVE N+Q  AA+ SRF
Sbjct: 478 NARCSILAAANPAYGRYNPKKTVEQNIQLPAALLSRF 514



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>HEMA_CVMA5 (P31615) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3|
           glycoprotein)
          Length = 428

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 243 QKRDAMAAAACKLPSTVFKLESRPWSG*GSDPAENGE 133
           ++ D M AAAC+LP   F+  S  +SG G+  A +G+
Sbjct: 309 RQSDNMTAAACQLPYCFFRNTSANYSG-GTHDAHHGD 344


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,344,424
Number of Sequences: 219361
Number of extensions: 487446
Number of successful extensions: 1556
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 80,573,946
effective HSP length: 68
effective length of database: 65,657,398
effective search space used: 1575777552
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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