Clone Name | bastl05e05 |
---|---|
Clone Library Name | barley_pub |
>IF41_WHEAT (Q03387) Eukaryotic initiation factor iso-4F subunit p82-34| (eIF-(iso)4F p82-34) Length = 788 Score = 169 bits (428), Expect = 3e-42 Identities = 86/106 (81%), Positives = 91/106 (85%) Frame = +3 Query: 156 MTTDQPVISLXXXXXXXXXXXXXLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHFET 335 MTTDQPVISL LFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH E+ Sbjct: 1 MTTDQPVISLRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLHSES 60 Query: 336 RERIRYSRDQLLDLRKITDISEQILRPQQEIEAELHGDDQSWVRND 473 RER+RYSRDQLLDLRKITD++EQILR QQEIEAEL+GDDQSWVRND Sbjct: 61 RERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRND 106
>HOMEZ_MOUSE (Q80W88) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 518 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = +3 Query: 300 GVSRIGDLHFETRERIRYSRDQLLDLRKITDISEQILRPQQE 425 G+S + ETR R+ Y RDQLL + + ++Q +RP QE Sbjct: 87 GISWSSEEIEETRARVVYHRDQLL-FKSLLSFTQQSVRPPQE 127
>PDE2A_HUMAN (O00408) cGMP-dependent 3',5'-cyclic phosphodiesterase (EC| 3.1.4.17) (Cyclic GMP-stimulated phosphodiesterase) (CGS-PDE) (cGSPDE) Length = 941 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/47 (36%), Positives = 25/47 (53%) Frame = +2 Query: 11 RSQTEPNPPPREEGKKKLGFLRDFLPGAPPIPCRSSCRGALVGFGTL 151 RSQ P P E +++ FL+ P PP PC S + AL+ G++ Sbjct: 12 RSQQYPAARPAEPRGQQV-FLKPDEPPPPPQPCADSLQDALLSLGSV 57
>HOMEZ_RAT (Q8K3E9) Homeobox and leucine zipper protein Homez (Homeodomain| leucine zipper-containing factor) Length = 513 Score = 29.3 bits (64), Expect = 5.4 Identities = 16/43 (37%), Positives = 24/43 (55%) Frame = +3 Query: 300 GVSRIGDLHFETRERIRYSRDQLLDLRKITDISEQILRPQQEI 428 G+S + ETR R+ Y RDQLL + + + +RP QE+ Sbjct: 87 GISWSSEEIEETRARVVYHRDQLL-FKSLLSFTHHAVRPPQEM 128
>SYA_WOLTR (Q5GSS5) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 875 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/49 (42%), Positives = 28/49 (57%) Frame = +3 Query: 294 ASGVSRIGDLHFETRERIRYSRDQLLDLRKITDISEQILRPQQEIEAEL 440 ASGV RI L +E I Y+RD ++LRK I+E + P EI + L Sbjct: 704 ASGVRRIEAL--TGQEAIDYARDNEINLRK---IAELVKAPVNEITSRL 747
>STK6_XENLA (Q91820) Serine/threonine-protein kinase Eg2 (EC 2.7.11.1) (pEg2)| (p46Eg265) Length = 407 Score = 28.5 bits (62), Expect = 9.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = +2 Query: 5 GERSQTEPNPPPREEGKKKLGFLRDFLPGAP 97 G Q + + P+EEGKKK L DF G P Sbjct: 115 GSTDQGKTSAVPKEEGKKKQWCLEDFEIGRP 145 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,093,300 Number of Sequences: 219361 Number of extensions: 812195 Number of successful extensions: 3195 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3059 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3194 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)