>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope
           ATPase 1)
          Length = 1020

 Score =  134 bits (336), Expect = 1e-31
 Identities = 65/88 (73%), Positives = 76/88 (86%)
 Frame = +2

Query: 164 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 343
           MESYL ENFG VK KNSS+EAL+RWRKLC +VKNPKRRFRFTANL KR EA+AI+ +N E
Sbjct: 1   MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60

Query: 344 KLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           K RVAVLVS+AAL+FI+ LKL +EY +P
Sbjct: 61  KFRVAVLVSQAALQFINSLKLSSEYTLP 88

>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 2)
          Length = 1014

 Score =  112 bits (281), Expect = 3e-25
 Identities = 59/88 (67%), Positives = 68/88 (77%)
 Frame = +2

Query: 164 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 343
           MESYL ENF  VK K+SSEE L +WR LC VVKNPKRRFRFTANL KR EA A++  N E
Sbjct: 1   MESYLNENFD-VKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 344 KLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           KLR+AVLVSKAA +FI G+   ++Y VP
Sbjct: 60  KLRIAVLVSKAAFQFISGVS-PSDYTVP 86

>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7)
          Length = 1015

 Score =  111 bits (278), Expect = 6e-25
 Identities = 59/88 (67%), Positives = 68/88 (77%)
 Frame = +2

Query: 164 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 343
           MESYL  NF  VK K+SSEE L +WR LCSVVKNPKRRFRFTANL KR EA A++  N E
Sbjct: 1   MESYLNSNFD-VKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59

Query: 344 KLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           KLR+AVLVSKAA +FI G+   ++Y VP
Sbjct: 60  KLRIAVLVSKAAFQFISGVS-PSDYKVP 86

>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 4)
          Length = 1030

 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = +2

Query: 197 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 376
           V+ KN S EA +RWR   S+VKN  RRFR   +LDK  + +  KH   EK+RVA  V KA
Sbjct: 10  VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQKA 69

Query: 377 ALRFI 391
           AL FI
Sbjct: 70  ALHFI 74

>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11)
          Length = 1025

 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 31/65 (47%), Positives = 38/65 (58%)
 Frame = +2

Query: 197 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 376
           V  KN S EA +RWR    +VKN  RRFR  +NLDK  E +  +    EK+RV   V KA
Sbjct: 10  VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVFYVQKA 69

Query: 377 ALRFI 391
           A +FI
Sbjct: 70  AFQFI 74

>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10)
          Length = 1069

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
 Frame = +2

Query: 113 GEGARSPPAGEGGREVGMESYLEEN---FGGVKGKNSSEEALRRWRKLCSVVKNPKRRFR 283
           G+   SP   +   E G  S+ E     F     KN+  E LRRWR+  ++V N  RRFR
Sbjct: 3   GQFNNSPRGEDKDVEAGTSSFTEYEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFR 61

Query: 284 FTANLDKRGEAQAI---KHANHEKLRVAVLVSKAALR 385
           +T +L +  + + +     A+ + +R A L   AA R
Sbjct: 62  YTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAASR 98

>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma|
           membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9)
          Length = 1073

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
 Frame = +2

Query: 206 KNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEK--LRVAVLVSKAA 379
           KN+S E+LRRWR+  ++V N  RRFR+T +L+K       +H ++ +  +R    V +AA
Sbjct: 38  KNASVESLRRWRQ-AALVLNASRRFRYTLDLNKE------EHYDNRRRMIRAHAQVIRAA 90

Query: 380 LRF 388
           L F
Sbjct: 91  LLF 93

>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC|
           3.6.3.8) (Ca(2+)-ATPase isoform 8)
          Length = 1074

 Score = 39.7 bits (91), Expect = 0.003
 Identities = 24/65 (36%), Positives = 38/65 (58%)
 Frame = +2

Query: 197 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 376
           +  KN+S E L++WRK  ++V N  RRFR+T +L K  E + ++    +K+R       A
Sbjct: 34  IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88

Query: 377 ALRFI 391
           A RF+
Sbjct: 89  ANRFM 93

>ITB6_CAVPO (P18563) Integrin beta-6 (Fragment)|
          Length = 577

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 47  GLVCGEDGECVCGRC 3
           GL+CG++G+C CG C
Sbjct: 408 GLLCGDNGDCECGEC 422

>ITB6_MOUSE (Q9Z0T9) Integrin beta-6 precursor|
          Length = 787

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 47  GLVCGEDGECVCGRC 3
           GL+CG++G+C CG C
Sbjct: 549 GLLCGDNGDCDCGEC 563

>SYL_PSEPK (Q88DN1) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 868

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 305 RGEAQAIKHANHEKLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           RG+ +    A+ E++  A   ++  LRFI GL +R   VVP
Sbjct: 819 RGQVEMPAAASREEVEAAARSNENVLRFIDGLTIRKVIVVP 859

>PAT3_CAEEL (Q27874) Integrin beta pat-3 precursor|
          Length = 809

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 47  GLVCGEDGECVCGRC 3
           G +C   GEC+CGRC
Sbjct: 614 GKICNGKGECICGRC 628

>RIMM_VIBCH (Q9KUF9) 16S rRNA-processing protein rimM|
          Length = 182

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = +2

Query: 161 GMESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTA-NLDKRGE 313
           G E+  ++N   V GK  S   +R W K+ S   NP+  F ++   +D++GE
Sbjct: 3   GKETMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGE 54

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 868

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 305 RGEAQAIKHANHEKLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           RG  +    A+ E++  A  +++  LRF  GL +R   VVP
Sbjct: 819 RGHIEMPASASREEVEAAARINENVLRFTDGLTIRKVIVVP 859

>ITB6_HUMAN (P18564) Integrin beta-6 precursor|
          Length = 788

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 47  GLVCGEDGECVCGRC 3
           GL+CG +G+C CG C
Sbjct: 549 GLLCGGNGDCDCGEC 563

>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 116 EGARSPPAGEGGREVGMESYLEENFGGVKGKNSSEEA 226
           EGA   P+GEG          EE  GG  G+ + E+A
Sbjct: 40  EGAAKAPSGEGAGAAAKAGATEEASGGRDGEGAGEQA 76

>TRUA_PICTO (Q6L0Y7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 251

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/82 (24%), Positives = 29/82 (35%)
 Frame = +2

Query: 182 ENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAV 361
           E F     KNS E  +       ++ KN +   R   N+   G    IK     +  + +
Sbjct: 21  EGFDRSNSKNSVESVIINVLSEYNITKNIESAARTDKNVSAAGNVFYIKTEERPEKILGI 80

Query: 362 LVSKAALRFIHGLKLRNEYVVP 427
           L       F H   L N Y+ P
Sbjct: 81  LNGNIKNMFFHSYYLSNSYINP 102

>SMC2_SCHPO (P41003) Structural maintenance of chromosome 2 (Chromosome|
           segregation protein cut14) (Cell untimely torn protein
           14)
          Length = 1172

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = -2

Query: 247 ELAPAPQRLLGRVLALDAPEVLLQVALHP 161
           EL PA Q + G  L  D PE   +V  HP
Sbjct: 616 ELLPAMQYVFGSTLVCDTPESAKKVTFHP 644

>ITB1_RAT (P49134) Integrin beta-1 precursor (Fibronectin receptor beta|
           subunit) (Integrin VLA-4 beta subunit) (CD29 antigen)
          Length = 799

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GECVCG+C
Sbjct: 525 ICSNNGECVCGQC 537

>ITB1_BOVIN (P53712) Integrin beta-1 (Fibronectin receptor beta subunit)|
           (Integrin VLA-4 beta subunit) (CD29 antigen) (Fragment)
          Length = 773

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GECVCG+C
Sbjct: 501 ICSNNGECVCGQC 513

>SYL_PSEAE (Q9HX33) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 873

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +2

Query: 305 RGEAQAIKHANHEKLRVAVLVSKAALRFIHGLKLRNEYVVP 427
           RG       A+ E +  A   ++  LRF  GL +R   VVP
Sbjct: 824 RGHIDVAASASREDVEAAARANENVLRFTEGLSIRKVIVVP 864

>ITB1_MOUSE (P09055) Integrin beta-1 precursor (Fibronectin receptor beta|
           subunit) (Integrin VLA-4 beta subunit) (CD29 antigen)
          Length = 798

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GECVCG+C
Sbjct: 524 ICSNNGECVCGQC 536

>ITB1_HUMAN (P05556) Integrin beta-1 precursor (Fibronectin receptor beta|
           subunit) (Integrin VLA-4 beta subunit) (CD29 antigen)
          Length = 798

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GECVCG+C
Sbjct: 524 ICSNNGECVCGQC 536

>ITB1_FELCA (P53713) Integrin beta-1 precursor (Fibronectin receptor beta|
           subunit) (Integrin VLA-4 beta subunit) (CD29 antigen)
          Length = 798

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GECVCG+C
Sbjct: 524 ICSNNGECVCGQC 536

>IDGF3_DROYA (Q8MX31) Chitinase-like protein Idgf3 precursor (Imaginal disk|
           growth factor protein 3)
          Length = 441

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +2

Query: 203 GKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKAA 379
           G  S +E L  W ++CS++ NP        N + RG +  +K       R      +AA
Sbjct: 327 GPQSKKEGLLNWAEICSLMPNP-------GNTNARGPSAPVKRVLDPTKRYGSYAFRAA 378

>IDGF3_DROME (Q8MLZ7) Chitinase-like protein Idgf3 precursor (Imaginal disk|
           growth factor protein 3)
          Length = 441

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 16/59 (27%), Positives = 25/59 (42%)
 Frame = +2

Query: 203 GKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKAA 379
           G  S +E L  W ++CS++ NP       +N + RG    +K       R      +AA
Sbjct: 327 GPQSKQEGLLNWAEICSLMPNP-------SNTNARGPNAPVKRVVDPTKRYGSYAFRAA 378

>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase|
           (EC 3.1.3.16) (TFIIF-associating CTD phosphatase)
          Length = 961

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = +3

Query: 15  HTLPILPANQPNQRV-----NPGRLVRAGA 89
           H +P+LP  QP   V     N G+L+R GA
Sbjct: 757 HPMPVLPKAQPGPEVRIYDSNTGKLIRTGA 786

>SOX14_DROME (P40656) Putative transcription factor SOX-14|
          Length = 472

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 10  PHTHSPSSPQTNPTSASIPAGSCAPG 87
           PHT  P SP  +P S+  PA +  PG
Sbjct: 50  PHTLPPFSPSPSPASSPSPAPAQTPG 75

>SAX1_CHICK (P19601) Homeobox protein SAX-1 (CHOX-3) (Fragment)|
          Length = 232

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
 Frame = -2

Query: 253 AAELAPAPQR---LLGRVLALDAPEVLLQVALHPHLPPSLARRRTPRSLAGLK*INIPAP 83
           AA  +P+P R   L G+     A    L  A  P  PP   RRRT RSL G +      P
Sbjct: 138 AARCSPSPPRPAALPGQTFPSYAATSALFPAASP-FPPGRPRRRTLRSLLGARVPRASTP 196

Query: 82  ARTSRP 65
             +  P
Sbjct: 197 RTSENP 202

>ITB1_CHICK (P07228) Integrin beta-1 precursor (CSAT antigen) (JG22 antigen)|
           (RGD-receptor)
          Length = 803

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -1

Query: 41  VCGEDGECVCGRC 3
           +C  +GEC+CG+C
Sbjct: 529 ICSNNGECICGQC 541


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,250,086
Number of Sequences: 219361
Number of extensions: 757506
Number of successful extensions: 4144
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 3689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4139
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)