ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05d12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 35 0.079
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 33 0.30
3BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 ... 33 0.39
4BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 30 3.3
5INHA_BOVIN (P07994) Inhibin alpha chain precursor 29 5.7
6ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adreno... 28 7.4
7ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adre... 28 7.4

>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 317 ASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDW 433
           A  L++DG  L++  R  T+ P     SW+ SD +PC W
Sbjct: 21  AFALNSDGAALLSLTRHWTSIPSDITQSWNASDSTPCSW 59



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 33.1 bits (74), Expect = 0.30
 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
 Frame = +2

Query: 266 MVKCVFLLVV---LALRGRGASGLDADGELLMAFRRAVTADPLGALGSWSYSDDSPCDW 433
           M+ C F L++   L LR  G    +A+G+ L A + ++ ADP   L SW  +  +PC W
Sbjct: 6   MIPCFFWLILVLDLVLRVSG----NAEGDALSALKNSL-ADPNKVLQSWDATLVTPCTW 59



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>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3)
          Length = 1164

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMAFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C+ +L + +  RGR     D  D  LL AF++ ++ +DP   LG+W Y S   PC W
Sbjct: 8   LILCLLVLFLTVDSRGRRLLSDDVNDTALLTAFKQTSIKSDPTNFLGNWRYGSGRDPCTW 67



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
 Frame = +2

Query: 266 MVKCVFLL-VVLALRGRGASGLDA-DGELLMAFRR-AVTADPLGALGSWSY-SDDSPCDW 433
           ++ C F   +V+ + G+     D  +  LL+AF++ +V +DP   LG+W Y S    C W
Sbjct: 9   LILCFFTTSLVMGIHGKHLINDDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSW 68



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>INHA_BOVIN (P07994) Inhibin alpha chain precursor|
          Length = 360

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 278 VFLLVVLALRGRGASGLDADGELLMAFRRAVTADPLG 388
           + LL++    G G  GL+ D EL++A  RA+  D LG
Sbjct: 5   LLLLLLAPQGGHGCHGLELDRELVLAKVRALFLDALG 41



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>ADA1B_RAT (P15823) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 515

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 358 AFMRILGCQCRGGRRRRRR 376



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>ADA1B_MOUSE (P97717) Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor)|
           (Alpha 1B-adrenoreceptor)
          Length = 514

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 190 SFVRSFGCNCNGGQEARRR 246
           +F+R  GC C GG+  RRR
Sbjct: 357 AFMRILGCQCRGGRRRRRR 375


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,690,107
Number of Sequences: 219361
Number of extensions: 521673
Number of successful extensions: 1498
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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