Clone Name | bastl05d08 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | WZZE_SALTY (O33789) Lipopolysaccharide biosynthesis protein wzzE... | 29 | 7.9 |
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>WZZE_SALTY (O33789) Lipopolysaccharide biosynthesis protein wzzE (Protein| metN) Length = 348 Score = 28.9 bits (63), Expect = 7.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -3 Query: 330 PRPGAMACSSDMDSDLRLLFRCTWS 256 P PGA A S++ + D+R LFR W+ Sbjct: 4 PLPGARAVSAENELDIRGLFRTLWA 28 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,142,450 Number of Sequences: 219361 Number of extensions: 713023 Number of successful extensions: 3073 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2904 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3062 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)