ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK129661.1| Homo sapiens cDNA FLJ26150 fis, clone ADG00494 42 0.15
2emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, c... 42 0.15
3dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clo... 40 0.58
4gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, compl... 40 0.58
5gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, comple... 40 0.58
6gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, comple... 40 0.58
7gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, comple... 40 0.58
8gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, comple... 40 0.58
9gb|DQ213530.1| Taeniopygia guttata clone 0058P0012H02 nuclear re... 38 2.3
10gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, comp... 38 2.3
11gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, comple... 38 2.3
12emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chro... 38 2.3
13gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosom... 38 2.3
14gb|AC118224.8| Mus musculus chromosome 10, clone RP23-341N20, co... 38 2.3
15gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete seq... 38 2.3
16emb|AL157763.6| Human DNA sequence from clone RP11-27D9 on chrom... 38 2.3
17ref|XM_791733.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 2.3
18gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Can... 38 2.3
19gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, comple... 38 2.3
20gb|AC162806.4| Mus musculus BAC clone RP23-95E13 from chromosome... 38 2.3
21gb|AC140363.3| Mus musculus BAC clone RP23-212M11 from 9, comple... 38 2.3
22gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome... 38 2.3
23emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on ch... 38 2.3
24gb|DQ217936.1| Homo sapiens heat shock protein 60 (HSPD1) gene, ... 36 9.1
25gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome... 36 9.1
26gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, co... 36 9.1
27gb|BC076854.1| Xenopus laevis hypothetical protein LOC445833, mR... 36 9.1
28gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete seq... 36 9.1
29gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete se... 36 9.1
30ref|XM_710814.1| Candida albicans SC5314 hypothetical protein (C... 36 9.1
31ref|XM_710764.1| Candida albicans SC5314 hypothetical protein (C... 36 9.1
32gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, co... 36 9.1
33gb|AC025778.8| Homo sapiens chromosome 16 clone CTD-2504F3, comp... 36 9.1
34gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosom... 36 9.1
35gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, c... 36 9.1
36emb|CR293534.5| Zebrafish DNA sequence from clone CH211-13J1 in ... 36 9.1
37gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, co... 36 9.1
38gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, com... 36 9.1
39gb|BC007182.1| Mus musculus mRNA similar to hypothetical protein... 36 9.1
40emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chro... 36 9.1
41gb|BC003314.1| Mus musculus apolipoprotein B editing complex 3, ... 36 9.1
42emb|AL365338.17| Human DNA sequence from clone RP11-123N4 on chr... 36 9.1
43gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, co... 36 9.1
44emb|AL035681.13|HS756G23 Human DNA sequence from clone RP4-756G2... 36 9.1
45emb|CR318674.9| Zebrafish DNA sequence from clone DKEY-210I3 in ... 36 9.1
46gb|AC166574.1| Mus musculus BAC clone RP23-131O4 from chromosome... 36 9.1
47emb|AJ250915.1|HSA250915 Homo sapiens p10 gene for chaperonin 10... 36 9.1
48emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 36 9.1
49emb|BX322638.6| Zebrafish DNA sequence from clone DKEYP-114C5 in... 36 9.1
50gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell ... 36 9.1
51gb|AC110011.3| Homo sapiens chromosome 5 clone RP11-536N17, comp... 36 9.1
52gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, co... 36 9.1
53gb|AC090152.4| Homo sapiens chromosome 8, clone RP11-554M1, comp... 36 9.1
54dbj|AK154035.1| Mus musculus 2 days neonate thymus thymic cells ... 36 9.1
55gb|AC100802.2| Homo sapiens chromosome 8, clone CTB-2109K7, comp... 36 9.1
56dbj|AK153719.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 36 9.1
57gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, comple... 36 9.1
58ref|XM_683537.1| PREDICTED: Danio rerio similar to spindle assem... 36 9.1
59ref|NM_030255.2| Mus musculus apolipoprotein B editing complex 3... 36 9.1
60dbj|AK167986.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 36 9.1
61gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosom... 36 9.1
62gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, com... 36 9.1
63gb|AC008821.6| Homo sapiens chromosome 5 clone CTD-2129G21, comp... 36 9.1
64gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 36 9.1
65gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosom... 36 9.1
66dbj|AK049256.1| Mus musculus ES cells cDNA, RIKEN full-length en... 36 9.1
67dbj|AK044394.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 36 9.1
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 36 9.1
69gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, co... 36 9.1
70gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, r... 36 9.1
71gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosom... 36 9.1
72gb|AC008592.4|AC008592 Homo sapiens chromosome 5 clone CTC-576H9... 36 9.1
73gb|AC136624.3| Homo sapiens chromosome 16 clone RP11-517A5, comp... 36 9.1
74gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Canc... 36 9.1
75gb|AC073611.29| Homo sapiens 12 BAC RP11-680A11 (Roswell Park Ca... 36 9.1
76gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, c... 36 9.1
77gb|AC130465.2| Homo sapiens chromosome 16 clone CTA-962B4, compl... 36 9.1
78gb|U91318.1|HUU91318 Human chromosome 16 BAC clone CIT987SK-A-96... 36 9.1
79ref|NM_211378.1| Eremothecium gossypii AGL351Wp (AGL351W), mRNA 36 9.1
80emb|AL513406.1|CNS07EFT Human DNA sequence chromosome 8 of Homo ... 36 9.1
81gb|AC007172.6|AC007172 Homo sapiens chromosome 9, clone hRPK.538... 36 9.1
82gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 11... 36 9.1
83dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, cl... 36 9.1
84gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 ... 36 9.1
85gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 36 9.1
86gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complet... 36 9.1
87gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complet... 36 9.1
88emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-3... 36 9.1
89gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, compl... 36 9.1 
>dbj|AK129661.1| Homo sapiens cDNA FLJ26150 fis, clone ADG00494
          Length = 1815

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 25  ttcaaaacaaacttcgccaaacttc 49
           |||||||||||||| ||||||||||
Sbjct: 974 ttcaaaacaaacttggccaaacttc 998
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>emb|AL163193.5|HS73E6 Homo sapiens chromosome 9 BAC RP11-73E6, complete sequence
          Length = 175931

 Score = 42.1 bits (21), Expect = 0.15
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 25    ttcaaaacaaacttcgccaaacttc 49
             |||||||||||||| ||||||||||
Sbjct: 83866 ttcaaaacaaacttggccaaacttc 83842
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>dbj|AB218617.1| Rattus norvegicus genomic DNA, chromosome 4, clone: CH230-65K18, complete
              sequence
          Length = 193613

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      tttctgctctcggttctctg 22
              ||||||||||||||||||||
Sbjct: 130457 tttctgctctcggttctctg 130438
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>gb|AC017099.11| Homo sapiens BAC clone RP11-542D13 from 2, complete sequence
          Length = 230426

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    ttctctgtcttcaaaacaaa 35
             ||||||||||||||||||||
Sbjct: 95840 ttctctgtcttcaaaacaaa 95859
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>gb|AC013272.5| Homo sapiens BAC clone RP11-401C13 from 2, complete sequence
          Length = 172705

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     ttctctgtcttcaaaacaaa 35
              ||||||||||||||||||||
Sbjct: 115529 ttctctgtcttcaaaacaaa 115510
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>gb|AC018892.8| Homo sapiens BAC clone RP11-499E14 from 2, complete sequence
          Length = 191055

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ttctctgtcttcaaaacaaa 35
             ||||||||||||||||||||
Sbjct: 92702 ttctctgtcttcaaaacaaa 92683
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>gb|AC160020.1| Homo sapiens BAC clone RP11-540L21 from 2, complete sequence
          Length = 202084

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ttctctgtcttcaaaacaaa 35
             ||||||||||||||||||||
Sbjct: 36178 ttctctgtcttcaaaacaaa 36159
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>gb|AC148026.2| Homo sapiens BAC clone RP11-625I24 from 2, complete sequence
          Length = 159856

 Score = 40.1 bits (20), Expect = 0.58
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ttctctgtcttcaaaacaaa 35
             ||||||||||||||||||||
Sbjct: 63183 ttctctgtcttcaaaacaaa 63164
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>gb|DQ213530.1| Taeniopygia guttata clone 0058P0012H02 nuclear receptor subfamily
          2 group F member 2-like mRNA, complete sequence
          Length = 1369

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                 
Query: 40 gccaaacttcctcttcccccttt 62
          |||||||||||| ||||||||||
Sbjct: 90 gccaaacttcctgttcccccttt 68
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>gb|AC165329.8| Mus musculus chromosome 3, clone wi1-298L18, complete sequence
          Length = 40686

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 18    ctctgtcttcaaaacaaac 36
             |||||||||||||||||||
Sbjct: 27441 ctctgtcttcaaaacaaac 27423
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>gb|AC079855.8| Homo sapiens BAC clone RP11-332L16 from 7, complete sequence
          Length = 143146

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     ctctgtcttcaaaacaaac 36
              |||||||||||||||||||
Sbjct: 117983 ctctgtcttcaaaacaaac 118001
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>emb|CT009769.4| Mouse DNA sequence from clone RP23-44C21 on chromosome 9, complete
             sequence
          Length = 197074

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    caaacttcctcttccccct 60
             |||||||||||||||||||
Sbjct: 67771 caaacttcctcttccccct 67753
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>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete
             sequence
          Length = 205684

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 27    caaaacaaacttcgccaaa 45
             |||||||||||||||||||
Sbjct: 29773 caaaacaaacttcgccaaa 29791
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>gb|AC118224.8| Mus musculus chromosome 10, clone RP23-341N20, complete sequence
          Length = 205533

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 19   tctgtcttcaaaacaaact 37
            |||||||||||||||||||
Sbjct: 6358 tctgtcttcaaaacaaact 6376
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>gb|AF022967.1| Caenorhabditis elegans cosmid C13A2, complete sequence
          Length = 35348

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 15    gttctctgtcttcaaaaca 33
             |||||||||||||||||||
Sbjct: 11151 gttctctgtcttcaaaaca 11169
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>emb|AL157763.6| Human DNA sequence from clone RP11-27D9 on chromosome 13q31.2-32.1,
             complete sequence
          Length = 51700

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    ttctctgtcttcaaaacaa 34
             |||||||||||||||||||
Sbjct: 48014 ttctctgtcttcaaaacaa 48032
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>ref|XM_791733.1| PREDICTED: Strongylocentrotus purpuratus similar to ankyrin repeat
            and FYVE domain containing 1 isoform 1 (LOC592196), mRNA
          Length = 4983

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    ctgctctcggttctctgtc 24
            |||||||||||||||||||
Sbjct: 1369 ctgctctcggttctctgtc 1351
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>gb|AC153539.7| Mus musculus 10 BAC RP23-245C19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 230854

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    tctgtcttcaaaacaaact 37
             |||||||||||||||||||
Sbjct: 36350 tctgtcttcaaaacaaact 36332
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>gb|AC107383.3| Homo sapiens BAC clone RP11-125C20 from 4, complete sequence
          Length = 173808

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 17     tctctgtcttcaaaacaaa 35
              |||||||||||||||||||
Sbjct: 121739 tctctgtcttcaaaacaaa 121757
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>gb|AC162806.4| Mus musculus BAC clone RP23-95E13 from chromosome 9, complete sequence
          Length = 165949

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    ctgtcttcaaaacaaactt 38
             |||||||||||||||||||
Sbjct: 18781 ctgtcttcaaaacaaactt 18799
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>gb|AC140363.3| Mus musculus BAC clone RP23-212M11 from 9, complete sequence
          Length = 217832

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    ctgtcttcaaaacaaactt 38
             |||||||||||||||||||
Sbjct: 41812 ctgtcttcaaaacaaactt 41794
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>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence
          Length = 208117

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     caaaacaaacttcgccaaa 45
              |||||||||||||||||||
Sbjct: 197051 caaaacaaacttcgccaaa 197069
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>emb|AL365326.14| Mouse DNA sequence from clone RP23-381K21 on chromosome 1, complete
             sequence
          Length = 189860

 Score = 38.2 bits (19), Expect = 2.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    tctgtcttcaaaacaaact 37
             |||||||||||||||||||
Sbjct: 75809 tctgtcttcaaaacaaact 75791
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>gb|DQ217936.1| Homo sapiens heat shock protein 60 (HSPD1) gene, complete cds
          Length = 17229

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 14966 ctctgtcttcaaaacaaa 14949
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>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032K12, complete sequence
          Length = 166936

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 19    tctgtcttcaaaacaaac 36
             ||||||||||||||||||
Sbjct: 62711 tctgtcttcaaaacaaac 62728
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>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence
          Length = 179782

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 4     ttctgctctcggttctct 21
             ||||||||||||||||||
Sbjct: 42621 ttctgctctcggttctct 42638
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>gb|BC076854.1| Xenopus laevis hypothetical protein LOC445833, mRNA (cDNA clone
           IMAGE:6637969), partial cds
          Length = 1769

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 41  ccaaacttcctcttcccc 58
           ||||||||||||||||||
Sbjct: 599 ccaaacttcctcttcccc 582
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>gb|AC147885.2| Xenopus tropicalis clone CH216-12C9, complete sequence
          Length = 222162

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 41     ccaaacttcctcttcccc 58
              ||||||||||||||||||
Sbjct: 102334 ccaaacttcctcttcccc 102317
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>gb|AC149545.1| Populus trichocarpa clone Pop1-71J23, complete sequence
          Length = 103543

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 9    ctctcggttctctgtctt 26
            ||||||||||||||||||
Sbjct: 8848 ctctcggttctctgtctt 8865
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>ref|XM_710814.1| Candida albicans SC5314 hypothetical protein (CaO19_8052), mRNA
          Length = 2253

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 16   ttctctgtcttcaaaacaaact 37
            ||||| ||||||||||||||||
Sbjct: 1083 ttctcagtcttcaaaacaaact 1104
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>ref|XM_710764.1| Candida albicans SC5314 hypothetical protein (CaO19_422), mRNA
          Length = 2256

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 16   ttctctgtcttcaaaacaaact 37
            ||||| ||||||||||||||||
Sbjct: 1074 ttctcagtcttcaaaacaaact 1095
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>gb|AC110038.25| Mus musculus chromosome 1, clone RP23-258M15, complete sequence
          Length = 232830

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 79895 ctctgtcttcaaaacaaa 79912
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>gb|AC025778.8| Homo sapiens chromosome 16 clone CTD-2504F3, complete sequence
          Length = 208417

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 29790 ctctgtcttcaaaacaaa 29773
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>gb|AC124560.4| Mus musculus BAC clone RP23-166O22 from chromosome 5, complete sequence
          Length = 222593

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 17     tctctgtcttcaaaacaa 34
              ||||||||||||||||||
Sbjct: 177457 tctctgtcttcaaaacaa 177474
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>gb|AC110534.11| Mus musculus chromosome 17, clone RP23-174D11, complete sequence
          Length = 174600

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 91044 ctctgtcttcaaaacaaa 91061
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>emb|CR293534.5| Zebrafish DNA sequence from clone CH211-13J1 in linkage group 6,
             complete sequence
          Length = 109426

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                   
Query: 2     ctttctgctctcggttctctgt 23
             ||||||||||||| ||||||||
Sbjct: 30318 ctttctgctctcgtttctctgt 30339
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>gb|AC113595.11| Mus musculus chromosome 15, clone RP23-373B5, complete sequence
          Length = 235814

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 122404 ctctgtcttcaaaacaaa 122387
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>gb|AC158751.7| Mus musculus chromosome 7, clone RP23-413C19, complete sequence
          Length = 198442

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 53327 ctctgtcttcaaaacaaa 53344
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>gb|BC007182.1| Mus musculus mRNA similar to hypothetical protein, MGC:7002 (cDNA
            clone IMAGE:3590667)
          Length = 2117

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1670 ctctgtcttcaaaacaaa 1653
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>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a
              calponin 2 (CNN2) pseudogene, a novel zinc finger
              pseudogene, a pseudogene similar to part of cytochrome
              P450, subfamily IVF, a chromosome 2 open reading frame 14
              (C2orf14) pseudogene, a pseudogene similar to part of
              sorting nexin associated golgi protein 1 (SNAG1), a
              melanoma antigen (LOC51152) pseudogene, four novel
              pseudogenes and an ankyrin repeat domain 20A (ANKRD20A)
              pseudogene, complete sequence
          Length = 149891

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 118449 ctctgtcttcaaaacaaa 118466
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>gb|BC003314.1| Mus musculus apolipoprotein B editing complex 3, mRNA (cDNA clone
            MGC:7002 IMAGE:3155422), complete cds
          Length = 1948

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1515 ctctgtcttcaaaacaaa 1498
to top
>emb|AL365338.17| Human DNA sequence from clone RP11-123N4 on chromosome 9 Contain the 3'
              end of the gene for rab6 GTPase activating protein (GAP and
              centrosome-associated) (GAPCENA), a pseudogene similar to
              part of thyroid receptor interacting protein 15 (TRIP15),
              the 3' end of the STRBP gene for spermatid perinuclear RNA
              binding protein (FLJ11307), a novel gene (GL012) and a CpG
              island, complete sequence
          Length = 150230

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 16     ttctctgtcttcaaaaca 33
              ||||||||||||||||||
Sbjct: 117560 ttctctgtcttcaaaaca 117577
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>gb|AC025853.17| Homo sapiens chromosome 8, clone RP11-353K12, complete sequence
          Length = 173681

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 164181 ctctgtcttcaaaacaaa 164198



 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tctgtcttcaaaacaaac 36
             ||||||||||||||||||
Sbjct: 44512 tctgtcttcaaaacaaac 44495
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>emb|AL035681.13|HS756G23 Human DNA sequence from clone RP4-756G23 on chromosome 22q13.31-13.33,
             complete sequence
          Length = 89948

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 19694 ctctgtcttcaaaacaaa 19711
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>emb|CR318674.9| Zebrafish DNA sequence from clone DKEY-210I3 in linkage group 23,
            complete sequence
          Length = 86079

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 21   tgtcttcaaaacaaactt 38
            ||||||||||||||||||
Sbjct: 6428 tgtcttcaaaacaaactt 6445
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>gb|AC166574.1| Mus musculus BAC clone RP23-131O4 from chromosome 14, complete sequence
          Length = 220918

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 157977 ctctgtcttcaaaacaaa 157994
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>emb|AJ250915.1|HSA250915 Homo sapiens p10 gene for chaperonin 10 (Hsp10 protein) and p60 gene
             for chaperonin 60 (Hsp60 protein)
          Length = 16986

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 15981 ctctgtcttcaaaacaaa 15964
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>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
            pseudogene similar to part of a novel protein
            (DKFZp434A171), a pseudogene similar to part of meprin A,
            alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
            similar to part of a novel transmembrane receptor protein
            and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 2425 ctctgtcttcaaaacaaa 2442
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>emb|BX322638.6| Zebrafish DNA sequence from clone DKEYP-114C5 in linkage group 11,
            complete sequence
          Length = 85185

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 41   ccaaacttcctcttcccccttt 62
            ||||||||||||||||| ||||
Sbjct: 6424 ccaaacttcctcttcccacttt 6445
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>gb|AC104627.8| Drosophila melanogaster X BAC RP98-4A11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 187921

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 45     acttcctcttcccccttt 62
              ||||||||||||||||||
Sbjct: 126751 acttcctcttcccccttt 126768
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>gb|AC110011.3| Homo sapiens chromosome 5 clone RP11-536N17, complete sequence
          Length = 85975

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 19    tctgtcttcaaaacaaac 36
             ||||||||||||||||||
Sbjct: 84448 tctgtcttcaaaacaaac 84431
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>gb|AC103693.2| Homo sapiens chromosome 18, clone CTD-2522C24, complete sequence
          Length = 193404

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                    
Query: 41     ccaaacttcctcttcccccttt 62
              ||||||||||||||||| ||||
Sbjct: 160471 ccaaacttcctcttccctcttt 160450
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>gb|AC090152.4| Homo sapiens chromosome 8, clone RP11-554M1, complete sequence
          Length = 118755

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 40294 ctctgtcttcaaaacaaa 40311
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>dbj|AK154035.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:E430026K09
            product:Warning: possibly chimeric clone, full insert
            sequence
          Length = 2718

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1538 ctctgtcttcaaaacaaa 1521
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>gb|AC100802.2| Homo sapiens chromosome 8, clone CTB-2109K7, complete sequence
          Length = 203506

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 191871 ctctgtcttcaaaacaaa 191854
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>dbj|AK153719.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630059M22 product:apolipoprotein B
            editing complex 3, full insert sequence
          Length = 1967

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1384 ctctgtcttcaaaacaaa 1367
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>gb|AC010746.8| Homo sapiens BAC clone RP11-550E21 from 2, complete sequence
          Length = 229379

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 223138 ctctgtcttcaaaacaaa 223155
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>ref|XM_683537.1| PREDICTED: Danio rerio similar to spindle assembly associated Sfi1
            homolog isoform a (LOC560147), mRNA
          Length = 4518

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                  
Query: 2    ctttctgctctcggttctctgt 23
            ||||||||||||| ||||||||
Sbjct: 1402 ctttctgctctcgtttctctgt 1381
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>ref|NM_030255.2| Mus musculus apolipoprotein B editing complex 3 (Apobec3), mRNA
          Length = 1967

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1384 ctctgtcttcaaaacaaa 1367
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>dbj|AK167986.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
            clone:I730045D21 product:apolipoprotein B editing complex
            3, full insert sequence
          Length = 1843

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1440 ctctgtcttcaaaacaaa 1423
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>gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosome 3, complete sequence
          Length = 228486

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 12392 ctctgtcttcaaaacaaa 12375
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>gb|AC158313.7| Mus musculus chromosome 8, clone RP23-246H16, complete sequence
          Length = 168864

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 70174 ctctgtcttcaaaacaaa 70191
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>gb|AC008821.6| Homo sapiens chromosome 5 clone CTD-2129G21, complete sequence
          Length = 184111

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     aacttcctcttccccctt 61
              ||||||||||||||||||
Sbjct: 100231 aacttcctcttccccctt 100214
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>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
             complete sequence
          Length = 1476513

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 33    aaacttcgccaaacttcc 50
             ||||||||||||||||||
Sbjct: 50657 aaacttcgccaaacttcc 50640
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>gb|AC158233.2| Mus musculus BAC clone RP23-240E15 from chromosome 3, complete sequence
          Length = 209923

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 31695 ctctgtcttcaaaacaaa 31712
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>dbj|AK049256.1| Mus musculus ES cells cDNA, RIKEN full-length enriched library,
            clone:C330017K03 product:hypothetical protein, MGC:7002,
            full insert sequence
          Length = 1802

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1394 ctctgtcttcaaaacaaa 1377
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>dbj|AK044394.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930010L09 product:hypothetical protein, MGC:7002,
            full insert sequence
          Length = 2782

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 1847 ctctgtcttcaaaacaaa 1830
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 19      tctgtcttcaaaacaaac 36
               ||||||||||||||||||
Sbjct: 6937453 tctgtcttcaaaacaaac 6937470
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>gb|AC008245.6| Homo sapiens chromosome 18, clone RP11-146N18, complete sequence
          Length = 183749

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                 
Query: 41  ccaaacttcctcttcccccttt 62
           ||||||||||||||||| ||||
Sbjct: 626 ccaaacttcctcttccctcttt 605
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>gb|AC007821.4|AC007821 Drosophila melanogaster, chromosome 3R, region 99F-100A, BAC clone
              BACR48I02, complete sequence
          Length = 163741

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 39     cgccaaacttcctcttcc 56
              ||||||||||||||||||
Sbjct: 116800 cgccaaacttcctcttcc 116817
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>gb|AC154337.2| Mus musculus BAC clone RP23-254P20 from chromosome 17, complete
             sequence
          Length = 182101

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 16    ttctctgtcttcaaaaca 33
             ||||||||||||||||||
Sbjct: 24210 ttctctgtcttcaaaaca 24227
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>gb|AC008592.4|AC008592 Homo sapiens chromosome 5 clone CTC-576H9, complete sequence
          Length = 192670

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 44     aacttcctcttccccctt 61
              ||||||||||||||||||
Sbjct: 180888 aacttcctcttccccctt 180871
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>gb|AC136624.3| Homo sapiens chromosome 16 clone RP11-517A5, complete sequence
          Length = 211896

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 142160 ctctgtcttcaaaacaaa 142143
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>gb|AC092960.3| Homo sapiens 3 BAC RP11-393B14 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 172507

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                              
Query: 18   ctctgtcttcaaaacaaa 35
            ||||||||||||||||||
Sbjct: 7787 ctctgtcttcaaaacaaa 7804
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>gb|AC073611.29| Homo sapiens 12 BAC RP11-680A11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 106551

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 89419 ctctgtcttcaaaacaaa 89402
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>gb|AC022966.13| Homo sapiens chromosome 17, clone RP11-323N12, complete sequence
          Length = 184139

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 167039 ctctgtcttcaaaacaaa 167056
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>gb|AC130465.2| Homo sapiens chromosome 16 clone CTA-962B4, complete sequence
          Length = 173911

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 40741 ctctgtcttcaaaacaaa 40758
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>gb|U91318.1|HUU91318 Human chromosome 16 BAC clone CIT987SK-A-962B4, complete sequence
          Length = 172984

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 40741 ctctgtcttcaaaacaaa 40758
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>ref|NM_211378.1| Eremothecium gossypii AGL351Wp (AGL351W), mRNA
          Length = 1668

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                             
Query: 33  aaacttcgccaaacttcc 50
           ||||||||||||||||||
Sbjct: 901 aaacttcgccaaacttcc 884
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>emb|AL513406.1|CNS07EFT Human DNA sequence chromosome 8 of Homo sapiens (human)
          Length = 204955

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 18     ctctgtcttcaaaacaaa 35
              ||||||||||||||||||
Sbjct: 167020 ctctgtcttcaaaacaaa 167037
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>gb|AC007172.6|AC007172 Homo sapiens chromosome 9, clone hRPK.538_E_7, complete sequence
          Length = 168535

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 16    ttctctgtcttcaaaaca 33
             ||||||||||||||||||
Sbjct: 39363 ttctctgtcttcaaaaca 39346
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>gb|AE003775.2| Drosophila melanogaster chromosome 3R, section 113 of 118 of the complete
              sequence
          Length = 236096

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 39     cgccaaacttcctcttcc 56
              ||||||||||||||||||
Sbjct: 133455 cgccaaacttcctcttcc 133472
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>dbj|AP006545.1| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1836B05,
             complete sequence
          Length = 156888

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 62193 ctctgtcttcaaaacaaa 62176
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>gb|AE003490.3| Drosophila melanogaster chromosome X, section 42 of 74 of the complete
              sequence
          Length = 302665

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 45     acttcctcttcccccttt 62
              ||||||||||||||||||
Sbjct: 208322 acttcctcttcccccttt 208339
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                 
Query: 19      tctgtcttcaaaacaaac 36
               ||||||||||||||||||
Sbjct: 7003920 tctgtcttcaaaacaaac 7003937
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>gb|AC147266.6| Mus musculus BAC clone RP24-246F6 from 8, complete sequence
          Length = 228955

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 22     gtcttcaaaacaaacttc 39
              ||||||||||||||||||
Sbjct: 220914 gtcttcaaaacaaacttc 220897
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>gb|AC123825.5| Mus musculus BAC clone RP24-93F18 from 8, complete sequence
          Length = 236875

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                                
Query: 22     gtcttcaaaacaaacttc 39
              ||||||||||||||||||
Sbjct: 104878 gtcttcaaaacaaacttc 104895
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>emb|AL356805.5|CNS05TDN Human chromosome 14 DNA sequence BAC R-33N16 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158838

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                               
Query: 18    ctctgtcttcaaaacaaa 35
             ||||||||||||||||||
Sbjct: 92714 ctctgtcttcaaaacaaa 92697
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>gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, complete sequence
          Length = 159423

 Score = 36.2 bits (18), Expect = 9.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 19   tctgtcttcaaaacaaac 36
            ||||||||||||||||||
Sbjct: 8537 tctgtcttcaaaacaaac 8520


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 825,363
Number of Sequences: 3902068
Number of extensions: 825363
Number of successful extensions: 61239
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61072
Number of HSP's gapped (non-prelim): 167
length of query: 62
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 41
effective length of database: 17,151,101,840
effective search space: 703195175440
effective search space used: 703195175440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)
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