>U202A_ARATH (Q9XIK4) Hypothetical UPF0202 protein At1g10490|
          Length = 1058

 Score =  213 bits (542), Expect = 2e-55
 Identities = 99/132 (75%), Positives = 120/132 (90%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEI 253
           VDERIRTLIENGV+ R RSMF+I+GDK+RDQIVNL+++L+KS VKS PSVLWCY+N+L+I
Sbjct: 5   VDERIRTLIENGVKLRHRSMFVIIGDKARDQIVNLHHILSKSVVKSNPSVLWCYKNRLDI 64

Query: 254 SSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQD 433
           SSH KKRAKQ+KK+ +RG + PEK D FSLFL+  D+T+C+YKDSER+LGNTFG+CILQD
Sbjct: 65  SSHNKKRAKQLKKMKERGQLDPEKLDAFSLFLDVVDVTHCLYKDSERILGNTFGICILQD 124

Query: 434 FEALTPNLLART 469
           FEALTPNLLART
Sbjct: 125 FEALTPNLLART 136

>U202B_ARATH (Q9M2Q4) Hypothetical UPF0202 protein At3g57940|
          Length = 1024

 Score =  204 bits (518), Expect = 1e-52
 Identities = 94/132 (71%), Positives = 117/132 (88%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEI 253
           VDERIRTLIENGV+ R RSMF+I+GDKSRDQIVNL++ML+K+ +K  PSVLWCY++KL+I
Sbjct: 5   VDERIRTLIENGVKLRHRSMFVIIGDKSRDQIVNLHHMLSKAVIKCNPSVLWCYKDKLDI 64

Query: 254 SSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQD 433
           SSH++KR+KQ+K+L +RG + PEK D FS  L+   +T+C+YKDSER+LGNTFGMCILQD
Sbjct: 65  SSHKQKRSKQLKRLRERGQLDPEKLDAFSRLLDVGRVTHCLYKDSERILGNTFGMCILQD 124

Query: 434 FEALTPNLLART 469
           FEALTPNLLART
Sbjct: 125 FEALTPNLLART 136

>ALP_HUMAN (Q9H0A0) N-acetyltransferase-like protein (EC 2.3.1.-)|
          Length = 1025

 Score =  178 bits (452), Expect = 5e-45
 Identities = 79/132 (59%), Positives = 109/132 (82%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEI 253
           VD RIR LIENGV +RQRS+F++VGD+ +DQ+V L++ML+K+ VK+RPSVLWCY+ +L  
Sbjct: 6   VDNRIRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKELGF 65

Query: 254 SSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQD 433
           SSHRKKR +Q++K ++ G +  ++ DPF LF+  ++I YC Y ++ ++LGNTFGMC+LQD
Sbjct: 66  SSHRKKRMRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYYNETHKILGNTFGMCVLQD 125

Query: 434 FEALTPNLLART 469
           FEALTPNLLART
Sbjct: 126 FEALTPNLLART 137

>YDK9_SCHPO (P87115) Hypothetical UPF0202 protein C20G8.09c in chromosome I|
          Length = 1033

 Score =  164 bits (415), Expect = 1e-40
 Identities = 75/133 (56%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL-E 250
           +D RI TLI+NG +++QRS F++VGD++RDQ+VNL+++L++S+V +RP+VLW Y+  L  
Sbjct: 6   LDSRIPTLIKNGCQEKQRSFFVVVGDRARDQVVNLHWLLSQSKVAARPNVLWMYKKDLLG 65

Query: 251 ISSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQ 430
            +SHRKKR  +IKK ++RG+  P   DPF LF   ++I YC YK+SE++LG T+GM +LQ
Sbjct: 66  FTSHRKKRENKIKKEIKRGIRDPNSEDPFELFCSITNIRYCYYKESEKILGQTYGMLVLQ 125

Query: 431 DFEALTPNLLART 469
           DFEALTPNLLART
Sbjct: 126 DFEALTPNLLART 138

>YNN2_YEAST (P53914) Hypothetical UPF0202 protein YNL132w|
          Length = 1056

 Score =  153 bits (387), Expect = 2e-37
 Identities = 73/133 (54%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKL-E 250
           +D RI +LI NGV+ +QRS+F+IVGD++R+Q+ NL+Y++  + +K   SVLW Y+ KL  
Sbjct: 6   IDSRIPSLIRNGVQTKQRSIFVIVGDRARNQLPNLHYLMMSADLKMNKSVLWAYKKKLLG 65

Query: 251 ISSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQ 430
            +SHRKKR  +IKK ++RG     + DPF  F+   +I Y  YK+SE++LGNT+GMCILQ
Sbjct: 66  FTSHRKKRENKIKKEIKRGTREVNEMDPFESFISNQNIRYVYYKESEKILGNTYGMCILQ 125

Query: 431 DFEALTPNLLART 469
           DFEALTPNLLART
Sbjct: 126 DFEALTPNLLART 138

>YIL8_CAEEL (O01757) Hypothetical UPF0202 protein F55A12.8 in chromosome I|
          Length = 1043

 Score =  153 bits (387), Expect = 2e-37
 Identities = 72/132 (54%), Positives = 98/132 (74%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEI 253
           +D RIRT IENGV    RSMF +VGDK+RDQ+  L ++L+KS V +RP+VLWCY+ +L  
Sbjct: 5   LDGRIRTQIENGVASGHRSMFAVVGDKARDQVPILYHILSKSTVSARPNVLWCYKKELSF 64

Query: 254 SSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQD 433
           S+HR K+AK++KK           ADPF +F+ ++ I YC Y ++E++LGNTFG+ +LQD
Sbjct: 65  STHRAKKAKKMKKATTTISGSLPDADPFDVFISSTQIRYCYYNETEKILGNTFGVLVLQD 124

Query: 434 FEALTPNLLART 469
           FEA+TPNLLART
Sbjct: 125 FEAMTPNLLART 136

>U202_DROME (Q9W3C1) Polycomb protein l(1)G0020 (p110 protein)|
          Length = 1008

 Score =  135 bits (340), Expect = 5e-32
 Identities = 72/133 (54%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
 Frame = +2

Query: 74  VDERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLE- 250
           +D RIR +IENGV+   R+MFI++GDK+RDQ+  L  +L KS VK+RP+VLWCY+NK E 
Sbjct: 6   IDNRIRVMIENGVKLGHRTMFIVIGDKARDQVPILYDILTKSTVKARPTVLWCYKNKDEA 65

Query: 251 ISSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDSERVLGNTFGMCILQ 430
           IS+H KKRAK+I      G +   +AD F  F   + I    Y ++  VLG T+G+C+LQ
Sbjct: 66  ISNHGKKRAKKIAV----GKVDVNEADLFDSFRVATTIHGRYYSETHAVLGRTYGVCVLQ 121

Query: 431 DFEALTPNLLART 469
           DFEALTPNLLART
Sbjct: 122 DFEALTPNLLART 134

>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +1

Query: 163  PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 291
            P   P L     P  +A  + L++PQQ + QQ QEE +Q  Q+
Sbjct: 902  PQAIPTLQLQSAPSTIADPQQLMVPQQQQQQQHQEEQQQQPQQ 944

>DPOG1_MOUSE (P54099) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1239

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/94 (25%), Positives = 42/94 (44%)
 Frame = +2

Query: 80  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISS 259
           ER  T  +N   + QR M   + D + D       +L+  R K  P   W +  + ++  
Sbjct: 425 ERYLTEAQNTYEELQREMKKSLMDLANDAC----QLLSGERYKEDP---WLWDLEWDLQE 477

Query: 260 HRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSD 361
            ++K+AK++KK      +  E A PF   ++  D
Sbjct: 478 FKQKKAKKVKKPASASKLPIEGAGPFGDPMDQED 511

>CN102_HUMAN (Q9H7Z3) Protein C14orf102|
          Length = 1164

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = +2

Query: 176 LNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMGPEKADPFSLFLET 355
           L Y +AK        V+WC   K +     K + K  KKL +  L  PE  + F L+ + 
Sbjct: 737 LQYEIAK--------VIWCLHTKNK--KRLKSQGKNCKKLAKNLLKEPENCNNFCLWKQY 786

Query: 356 SDITYCM--YKDSERVLGNTFGM 418
           + + + +   +D+ +V     GM
Sbjct: 787 AHLEWLLGNTEDARKVFDTALGM 809

>CN102_MOUSE (Q80XC6) Protein C14orf102 homolog|
          Length = 1172

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 26/86 (30%), Positives = 36/86 (41%)
 Frame = +2

Query: 152 KSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQRGLMGPEKAD 331
           KS+  +  L Y +AK        V+WC   K       K + K  KKL +  L  PE  +
Sbjct: 738 KSQLSLSWLRYEIAK--------VIWCLHTK---KKRLKSQGKSCKKLAKNLLKEPENRN 786

Query: 332 PFSLFLETSDITYCMYKDSERVLGNT 409
            F L+ +        Y   E +LGNT
Sbjct: 787 NFCLWKQ--------YAHLEWLLGNT 804

>AGO2_DROME (Q9VUQ5) Argonaute 2 protein|
          Length = 1214

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 169 RQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQE 291
           RQ Q    Q P+Q+   + L  PQQ + QQP ++ +Q+ ++
Sbjct: 30  RQQQPQQLQQPQQLQQPQQLQQPQQQQQQQPHQQQQQSSRQ 70

>LMBL3_MOUSE (Q8BLB7) Lethal(3)malignant brain tumor-like 3 protein|
           (L(3)mbt-like 3 protein)
          Length = 883

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 175 PQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQEAHAARA 309
           P +   Q P+QV  ++    PQQA+     ++A+QA Q   A +A
Sbjct: 664 PSVQQSQPPQQVQQVQHAQPPQQAQKAPQAQQAQQAQQAQQAPQA 708

>OCTB1_DROME (Q9VCZ3) Octopamine receptor beta-1 (DmOct-beta-1R) (DmOA2)|
          Length = 508

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 372 Q*VMSEVSRKREKGSAFSGPMSPRCMSFLICLARFFLWLLISSL 241
           Q  +S + R+R+        MS    +FLIC   FFLW ++SSL
Sbjct: 336 QSTISTMRRERKAARTLGIIMS----AFLICWLPFFLWYIVSSL 375

>UVRB_FUSNN (Q8RGR2) UvrABC system protein B (Protein uvrB) (Excinuclease ABC|
           subunit B)
          Length = 663

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/47 (29%), Positives = 28/47 (59%)
 Frame = +2

Query: 161 DQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKRAKQIKKLMQ 301
           + ++NL+Y + + + ++   V   +RNK +I     K  K+IKKL++
Sbjct: 596 EDLINLDYGIEEKKFENDKKV---FRNKTDIEKEITKLEKKIKKLVE 639

>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2|
          Length = 525

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +1

Query: 163 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 288
           P +QPQ    Q P+Q         PQQ   QQPQ++ +Q  Q
Sbjct: 124 PQQQPQQQPQQQPQQQ--------PQQQPQQQPQQQPQQQPQ 157

>DPOG1_RAT (Q9QYV8) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial|
           DNA polymerase catalytic subunit) (PolG-alpha)
          Length = 1216

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = +2

Query: 80  ERIRTLIENGVRQRQRSMFIIVGDKSRDQIVN-LNYMLAKSRVKSRPSVLWCYRNKLEIS 256
           ER  T  ++   + QR M      KS  ++ N    +L+  R K  P   W +  + ++ 
Sbjct: 424 ERYLTEAQSTYEELQREM-----KKSLMELANDACQLLSGERYKEDP---WLWDLEWDLQ 475

Query: 257 SHRKKRAKQIKKLMQRGLMGPEKADPFSLFLETSD 361
             ++K+AK++KK      +  E A PF   ++  D
Sbjct: 476 EFKQKKAKKVKKTASASKLPIEGAGPFGDPMDQED 510

>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 760

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +1

Query: 163 PDRQPQLHAGQVPRQVAPLRALVLPQQARDQQPQEEARQADQ 288
           P +QPQ   GQ P+Q+   +    PQQ   QQPQ+   Q  Q
Sbjct: 658 PGQQPQQIPGQQPQQIPGQQ----PQQIPGQQPQQIPVQQPQ 695

>GPA12_CAEEL (Q19572) Guanine nucleotide-binding protein alpha-12 subunit|
          Length = 355

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
 Frame = +2

Query: 101 ENGVRQRQRSMFII--VGDKSRDQIVNLNYMLAKSRVKSRPSVLWCYRNKLEISSHRKKR 274
           E+G     + M II   G+ + D++      + ++ + S   VL   RNKL I+    KR
Sbjct: 39  ESGKSTFVKQMHIIHGAGEFTADEVRAYRQQIYQNAI-SAMRVLLDARNKLGIAWEDPKR 97

Query: 275 AKQIKKLMQRGLMGPEKADPFSLFLETSDITYCMYKDS 388
             +++K+M+  +    K   F+ F+E + I    + D+
Sbjct: 98  QVEVEKVMRFSVGDLLKGIDFTTFVEVAPIISDFWNDA 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.315    0.130    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,988,191
Number of Sequences: 219361
Number of extensions: 647679
Number of successful extensions: 2607
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2592
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)