ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05c11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA 357 2e-95
2dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
3ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA 258 1e-65
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
5dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic D... 135 1e-28
6dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 127 3e-26
7gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (C... 103 5e-19
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
9dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
10dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
11ref|XM_463460.1| Oryza sativa (japonica cultivar-group), predic... 96 1e-16
12ref|XM_463457.1| Oryza sativa (japonica cultivar-group), predic... 80 7e-12
13gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence 50 0.007
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
15dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
16dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 46 0.10
17ref|XM_463353.1| Oryza sativa (japonica cultivar-group), predic... 44 0.40
18dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
19gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Can... 44 0.40
20ref|XM_465184.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
21ref|NM_183989.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
22gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
23gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
24gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
25gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
26gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
27gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
28emb|AL512783.22| Human DNA sequence from clone RP11-462F15 on ch... 42 1.6
29emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
30gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
34dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
35dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
38dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
39dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
40dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
43dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
44dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
45dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
46gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, comp... 42 1.6
47tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.6
48dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
49gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
50gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
51gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
52emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.6
53emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.6
54gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Ca... 40 6.3
55gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosom... 40 6.3
56gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 6.3
57gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 6.3
58gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 6.3
59gb|AC139755.3| Mus musculus BAC clone RP24-96N20 from chromosome... 40 6.3
60ref|XM_842923.1| Leishmania major strain Friedlin hypothetical p... 40 6.3
61ref|XM_756964.1| Ustilago maydis 521 hypothetical protein (UM059... 40 6.3
62gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome... 40 6.3
63emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 o... 40 6.3
64gb|AC163098.4| Mus musculus chromosome 19, clone RP23-262J17, co... 40 6.3
65emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
66emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 40 6.3
67emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.3
68gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 40 6.3
69gb|AF078737.1|AF078737 Caldicellulosiruptor sp. Tok7B.1 XynA (xy... 40 6.3
70dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 6.3
71emb|AL626767.15| Mouse DNA sequence from clone RP23-421C7 on chr... 40 6.3
72gb|AC120557.12| Mus musculus chromosome 19, clone RP24-493E6, co... 40 6.3
73emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575... 40 6.3
74gb|AC146298.4| Mus musculus BAC clone RP23-214O2 from 6, complet... 40 6.3
75emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chr... 40 6.3 
>ref|XM_478770.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3199

 Score =  357 bits (180), Expect = 2e-95
 Identities = 261/288 (90%)
 Strand = Plus / Plus

                                                                       
Query: 180 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 233 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 292

                                                                       
Query: 240 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 299
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 293 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaacgtctcgg 352

                                                                       
Query: 300 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 359
           |||| ||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||
Sbjct: 353 tgggctacttctgcgatcccgaggggctcgaggggctcgcgcacttccttgagcatatgc 412

                                                                       
Query: 360 ttttctacgcgagtggaaaatatccaatagaagacagttactcaaagtacatcgcagagc 419
           ||||||| || ||||  |||||||| ||||||||||||||||| ||||| ||  ||||||
Sbjct: 413 ttttctatgctagtgagaaatatcctatagaagacagttactccaagtatattacagagc 472

                                                           
Query: 420 atggtggttcaaccaatgccttcacaacctctgaacacacaaacttct 467
           |||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 473 atggtggttcaaccaatgccttcacaacttgtgaacatacaaacttct 520
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>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full
           insert sequence
          Length = 3200

 Score =  357 bits (180), Expect = 2e-95
 Identities = 261/288 (90%)
 Strand = Plus / Plus

                                                                       
Query: 180 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 233 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 292

                                                                       
Query: 240 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 299
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 293 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaacgtctcgg 352

                                                                       
Query: 300 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 359
           |||| ||||||||||||||||| ||| | |||||||||||||||||||| ||||||||||
Sbjct: 353 tgggctacttctgcgatcccgaggggctcgaggggctcgcgcacttccttgagcatatgc 412

                                                                       
Query: 360 ttttctacgcgagtggaaaatatccaatagaagacagttactcaaagtacatcgcagagc 419
           ||||||| || ||||  |||||||| ||||||||||||||||| ||||| ||  ||||||
Sbjct: 413 ttttctatgctagtgagaaatatcctatagaagacagttactccaagtatattacagagc 472

                                                           
Query: 420 atggtggttcaaccaatgccttcacaacctctgaacacacaaacttct 467
           |||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 473 atggtggttcaaccaatgccttcacaacttgtgaacatacaaacttct 520
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>ref|XM_478769.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2997

 Score =  258 bits (130), Expect = 1e-65
 Identities = 232/266 (87%)
 Strand = Plus / Plus

                                                                       
Query: 180 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
           |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 119 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 178

                                                                       
Query: 240 agtgcctcctcatcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 299
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agtgcctcctcgtcagcgaccccgacaccgacaaggcggcggcgtcgatgaatgtctcgg 238

                                                                       
Query: 300 tggggtacttctgcgatcccgatgggatggaggggctcgcgcacttcctcgagcatatgc 359
           |||| |||||||||||||||||  || |    || || || || ||||| ||||||||||
Sbjct: 239 tgggctacttctgcgatcccgagaggctccctggccttgcacatttccttgagcatatgc 298

                                                                       
Query: 360 ttttctacgcgagtggaaaatatccaatagaagacagttactcaaagtacatcgcagagc 419
           ||||||| || || |  ||||| ||  | ||||||  |||||||||||| || |||||||
Sbjct: 299 ttttctatgctagcgagaaataccctgtggaagacgattactcaaagtatattgcagagc 358

                                     
Query: 420 atggtggttcaaccaatgccttcaca 445
           |||||||||||||||| |||||||||
Sbjct: 359 atggtggttcaaccaacgccttcaca 384
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                            
Query: 180      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
                |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 22901097 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 22901038

                                                    
Query: 240      agtgcctcctcatcagcgaccccgacaccgacaagg 275
                ||||||||||| ||||||||||||||||||||||||
Sbjct: 22901037 agtgcctcctcgtcagcgaccccgacaccgacaagg 22901002



 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                            
Query: 180      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
                |||| |||||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 22937417 tcacgaagccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 22937358

                                                    
Query: 240      agtgcctcctcatcagcgaccccgacaccgacaagg 275
                |||||||| |||||||||||||||||||||| ||||
Sbjct: 22937357 agtgcctcgtcatcagcgaccccgacaccgataagg 22937322



 Score =  119 bits (60), Expect = 9e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                            
Query: 180      tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
                |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 22918861 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 22918802

                                                    
Query: 240      agtgcctcctcatcagcgaccccgacaccgacaagg 275
                ||||||||||| ||||||||||||||||||||||||
Sbjct: 22918801 agtgcctcctcgtcagcgaccccgacaccgacaagg 22918766



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                            
Query: 273      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggatggagg 332
                ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 22918649 aggcggcggcgtcgatgaacgtctcggtgggctacttctgcgatcccgaggggctcgagg 22918590

                                
Query: 333      ggctcgcgcacttcct 348
                ||||||||||||||||
Sbjct: 22918589 ggctcgcgcacttcct 22918574



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                                 
Query: 273      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 321
                ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 22900894 aggcggcggcgtcgatgaatgtctcggtgggctacttctgcgatcccga 22900846



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                   
Query: 417      agcatggtggttcaaccaatgccttcacaacctctgaacacacaaacttct 467
                ||||||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 22915918 agcatggtggttcaaccaatgccttcacaacttgtgaacatacaaacttct 22915868



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 350      gagcatatgcttttctacgcgagtggaaaatatccaatagaagacagttactcaaagtac 409
                ||||||||||||||||| || || |  |||||||| ||||||||||||||||||||||| 
Sbjct: 22935662 gagcatatgcttttctatgctagcgagaaatatcctatagaagacagttactcaaagtat 22935603

                         
Query: 410      atcgcagag 418
                || ||||||
Sbjct: 22935602 attgcagag 22935594



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                           
Query: 350      gagcatatgcttttctacgcgagtggaaaatatccaatagaagacagttactcaaagta 408
                ||||||||||||||||| || ||||  |||||||| ||||||||||||||||| |||||
Sbjct: 22916634 gagcatatgcttttctatgctagtgagaaatatcctatagaagacagttactccaagta 22916576



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 273      aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 321
                ||||||||||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 22937223 aggcggcggcgtcgatgaacgtctcggtaggctacttctgcgaccccga 22937175



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 417      agcatggtggttcaaccaatgccttcaca 445
                ||||||||||||||||||| |||||||||
Sbjct: 22898226 agcatggtggttcaaccaacgccttcaca 22898198



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 417      agcatggtggttcaaccaatgccttcacaacctctgaacacacaaactt 465
                |||||||||||||||  || ||||||||| |   |||||||||||||||
Sbjct: 22934748 agcatggtggttcaaggaacgccttcacatctcgtgaacacacaaactt 22934700
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>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1019_E02
          Length = 121607

 Score =  135 bits (68), Expect = 1e-28
 Identities = 89/96 (92%)
 Strand = Plus / Minus

                                                                         
Query: 180   tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
             |||||| |||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 94364 tcaccaggccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 94305

                                                 
Query: 240   agtgcctcctcatcagcgaccccgacaccgacaagg 275
             ||||||||||| ||||||||||||||||||||||||
Sbjct: 94304 agtgcctcctcgtcagcgaccccgacaccgacaagg 94269



 Score =  119 bits (60), Expect = 9e-24
 Identities = 87/96 (90%)
 Strand = Plus / Minus

                                                                          
Query: 180    tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
              |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 112128 tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 112069

                                                  
Query: 240    agtgcctcctcatcagcgaccccgacaccgacaagg 275
              ||||||||||| ||||||||||||||||||||||||
Sbjct: 112068 agtgcctcctcgtcagcgaccccgacaccgacaagg 112033



 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                          
Query: 273    aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggatggagg 332
              ||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||
Sbjct: 111916 aggcggcggcgtcgatgaacgtctcggtgggctacttctgcgatcccgaggggctcgagg 111857

                              
Query: 333    ggctcgcgcacttcct 348
              ||||||||||||||||
Sbjct: 111856 ggctcgcgcacttcct 111841



 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 48/49 (97%)
 Strand = Plus / Minus

                                                              
Query: 273   aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 321
             ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 94161 aggcggcggcgtcgatgaatgtctcggtgggctacttctgcgatcccga 94113



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 48/51 (94%)
 Strand = Plus / Minus

                                                                 
Query: 417    agcatggtggttcaaccaatgccttcacaacctctgaacacacaaacttct 467
              ||||||||||||||||||||||||||||||| | |||||| ||||||||||
Sbjct: 109185 agcatggtggttcaaccaatgccttcacaacttgtgaacatacaaacttct 109135



 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 53/59 (89%)
 Strand = Plus / Minus

                                                                         
Query: 350    gagcatatgcttttctacgcgagtggaaaatatccaatagaagacagttactcaaagta 408
              ||||||||||||||||| || ||||  |||||||| ||||||||||||||||| |||||
Sbjct: 109901 gagcatatgcttttctatgctagtgagaaatatcctatagaagacagttactccaagta 109843



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 417   agcatggtggttcaaccaatgccttcaca 445
             ||||||||||||||||||| |||||||||
Sbjct: 91493 agcatggtggttcaaccaacgccttcaca 91465
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score =  127 bits (64), Expect = 3e-26
 Identities = 88/96 (91%)
 Strand = Plus / Minus

                                                                         
Query: 180   tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
             |||| |||||||||||||||| |||||||||||||||||| |||||||| || ||||| |
Sbjct: 12631 tcacgaagccccgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgccctcg 12572

                                                 
Query: 240   agtgcctcctcatcagcgaccccgacaccgacaagg 275
             |||||||| |||||||||||||||||||||| ||||
Sbjct: 12571 agtgcctcgtcatcagcgaccccgacaccgataagg 12536



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                         
Query: 350   gagcatatgcttttctacgcgagtggaaaatatccaatagaagacagttactcaaagtac 409
             ||||||||||||||||| || || |  |||||||| ||||||||||||||||||||||| 
Sbjct: 10876 gagcatatgcttttctatgctagcgagaaatatcctatagaagacagttactcaaagtat 10817

                      
Query: 410   atcgcagag 418
             || ||||||
Sbjct: 10816 attgcagag 10808



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                              
Query: 273   aggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccga 321
             ||||||||||||||||||| |||||||| || ||||||||||| |||||
Sbjct: 12437 aggcggcggcgtcgatgaacgtctcggtaggctacttctgcgaccccga 12389



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 417  agcatggtggttcaaccaatgccttcacaacctctgaacacacaaactt 465
            |||||||||||||||  || ||||||||| |   |||||||||||||||
Sbjct: 9962 agcatggtggttcaaggaacgccttcacatctcgtgaacacacaaactt 9914
to top
>gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (CCG)X10, closest to
           marker R2561, genomic sequence
          Length = 230

 Score =  103 bits (52), Expect = 5e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                       
Query: 180 tcaccaagccccgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctgg 239
           |||||| ||| |||||||||| |||||||||||||||||| |||||||| || | ||| |
Sbjct: 88  tcaccaggccacgcaacgacaagcgcgggtaccgccgcgtcgtgctccccaacgacctcg 29

                                       
Query: 240 agtgcctcctcatcagcgaccccgacac 267
           ||||||||||| ||||||||||||||||
Sbjct: 28  agtgcctcctcgtcagcgaccccgacac 1
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                            
Query: 191      cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 250
                |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 32978351 cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 32978410

                                         
Query: 251      atcagcgaccccgacaccgacaagg 275
                ||||||||| |||||||||||||||
Sbjct: 32978411 atcagcgactccgacaccgacaagg 32978435



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                            
Query: 208      gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 267
                ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 32958823 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 32958882

                        
Query: 268      cgacaagg 275
                ||||||||
Sbjct: 32958883 cgacaagg 32958890



 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 68       cgacgacgactgggcggcgacg 89
                ||||||||||||||||||||||
Sbjct: 22542773 cgacgacgactgggcggcgacg 22542752



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 13748118 ctccccgagcgacgacgacgactgg 13748142



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 12499473 ctccccgagcgacgacgacgactgg 12499497
to top
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0010B10
          Length = 155263

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 76/85 (89%)
 Strand = Plus / Plus

                                                                         
Query: 191   cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 250
             |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 44579 cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 44638

                                      
Query: 251   atcagcgaccccgacaccgacaagg 275
             ||||||||| |||||||||||||||
Sbjct: 44639 atcagcgactccgacaccgacaagg 44663



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                         
Query: 208   gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 267
             ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 25051 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 25110

                     
Query: 268   cgacaagg 275
             ||||||||
Sbjct: 25111 cgacaagg 25118
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>dbj|AK100383.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085G23, full
           insert sequence
          Length = 3262

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 127/153 (83%)
 Strand = Plus / Plus

                                                                       
Query: 208 gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 267
           ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 198 gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 257

                                                                       
Query: 268 cgacaaggcggcggcgtcgatgaatgtctcggtggggtacttctgcgatcccgatgggat 327
           |||||||||||||||||  ||| | ||    ||||| |  ||| |||| || || ||| |
Sbjct: 258 cgacaaggcggcggcgtgtatggaggttggcgtgggctcgttcagcgacccggaggggct 317

                                            
Query: 328 ggaggggctcgcgcacttcctcgagcatatgct 360
            ||||| ||||| ||||||||||||||||||||
Sbjct: 318 cgagggcctcgcccacttcctcgagcatatgct 350
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>ref|XM_463460.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2838

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                       
Query: 191 cgcaacgacaggcgcgggtaccgccgcgtggtgctcccgaatgccctggagtgcctcctc 250
           |||| ||||| ||| | ||||||||| ||||||||||| ||||| || ||||||||||||
Sbjct: 46  cgcagcgacaagcgggagtaccgccgggtggtgctccccaatgcgctcgagtgcctcctc 105

                                   
Query: 251 atcagcgaccccgacaccgacaag 274
           ||||||||| ||||||||||||||
Sbjct: 106 atcagcgactccgacaccgacaag 129
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>ref|XM_463457.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2841

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 208 gtaccgccgcgtggtgctcccgaatgccctggagtgcctcctcatcagcgaccccgacac 267
           ||||||||| ||||||||||| || || || ||||||||||||||||||||| |||| ||
Sbjct: 75  gtaccgccgggtggtgctccccaacgcgctcgagtgcctcctcatcagcgactccgaaac 134

                   
Query: 268 cgacaagg 275
           ||||||||
Sbjct: 135 cgacaagg 142



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 329 gaggggctcgcgcacttcctcgagcatatgct 360
           ||||| ||||| ||||||||||||||||||||
Sbjct: 256 gagggcctcgcccacttcctcgagcatatgct 287
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>gb|AY035059.1| Arabidopsis thaliana At3g57470 mRNA sequence
          Length = 3270

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 327 tggaggggctcgcgcacttcctcgagcatatgcttttctacgcgagtggaaaatatccaa 386
           |||| ||||| || || ||||| ||||||||||| || || || |||| |||||| ||  
Sbjct: 324 tggaagggctagctcatttccttgagcatatgctgttttatgcaagtgaaaaataccctg 383

                                                
Query: 387 tagaagacagttactcaaagtacatcgcagagcatgg 423
             ||||| |||||||| ||||||||| ||||||||||
Sbjct: 384 aggaagatagttactccaagtacatcacagagcatgg 420
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 65       cgacgacgacgactgggcggcgacg 89
                |||||||||||||||||||||||||
Sbjct: 22688752 cgacgacgacgactgggcggcgacg 22688776



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 15954093 ctccccgagcgacgacgacgactgg 15954069
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>dbj|AP005966.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1047H05
          Length = 187273

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 65     cgacgacgacgactgggcggcgacg 89
              |||||||||||||||||||||||||
Sbjct: 154161 cgacgacgacgactgggcggcgacg 154185
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 332     gggctcgcgcacttcctcgagca 354
               |||||||||||||||||||||||
Sbjct: 8220555 gggctcgcgcacttcctcgagca 8220577
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>ref|XM_463353.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 600

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 68  cgacgacgactgggcggcgacg 89
           ||||||||||||||||||||||
Sbjct: 430 cgacgacgactgggcggcgacg 409
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>dbj|AP003332.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1097D05
          Length = 144879

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 68    cgacgacgactgggcggcgacg 89
             ||||||||||||||||||||||
Sbjct: 58510 cgacgacgactgggcggcgacg 58489
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>gb|AC153379.1| Mus musculus 10 BAC RP23-230J20 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 174195

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 10    gacttgacctcccccaaccccc 31
             ||||||||||||||||||||||
Sbjct: 98262 gacttgacctcccccaaccccc 98283
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>ref|XM_465184.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 324

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 56  ctcccctagcgacgacgacgactgg 80
           |||||| ||||||||||||||||||
Sbjct: 237 ctccccaagcgacgacgacgactgg 261
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>ref|NM_183989.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2013

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 56  ctcccctagcgacgacgacgactgg 80
           |||||| ||||||||||||||||||
Sbjct: 444 ctccccgagcgacgacgacgactgg 468
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>gb|AC150654.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0094L06, complete sequence
          Length = 189328

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 95802 ctccccgagcgacgacgacgactgg 95778



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 30177 ctccccgagcgacgacgacgactgg 30153
to top
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0032N11 map near 50283S, complete sequence
          Length = 139217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 62818 ctccccgagcgacgacgacgactgg 62842
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>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBa0095J15, complete sequence
          Length = 156023

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 19275 ctccccgagcgacgacgacgactgg 19251
to top
>gb|AC137612.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0022B03,
              complete sequence
          Length = 151814

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     ctcccctagcgacgacgacgactgg 80
              |||||| ||||||||||||||||||
Sbjct: 137049 ctccccgagcgacgacgacgactgg 137025
to top
>gb|AC109646.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0017K22,
              complete sequence
          Length = 176399

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     ctcccctagcgacgacgacgactgg 80
              |||||| ||||||||||||||||||
Sbjct: 164697 ctccccgagcgacgacgacgactgg 164673



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 99073 ctccccgagcgacgacgacgactgg 99049
to top
>gb|AC137615.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053F13, from chromosome 5, complete sequence
          Length = 149538

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 51627 ctccccgagcgacgacgacgactgg 51603
to top
>emb|AL512783.22| Human DNA sequence from clone RP11-462F15 on chromosome 10 Contains the
             3' end of the gene for CamKI-like protein kinase (CKLiK)
             (LOC221042 LOC283070), complete sequence
          Length = 101744

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 447   cctctgaacacacaaacttct 467
             |||||||||||||||||||||
Sbjct: 21153 cctctgaacacacaaacttct 21133
to top
>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16,
             complete sequence
          Length = 154397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 92837 ctccccgagcgacgacgacgactgg 92813
to top
>gb|AC083944.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0047G15, from chromosome 10, complete sequence
          Length = 166474

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     ctcccctagcgacgacgacgactgg 80
              |||||| ||||||||||||||||||
Sbjct: 152805 ctccccgagcgacgacgacgactgg 152781
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 3983522 ctccccgagcgacgacgacgactgg 3983498
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 11445080 ctccccgagcgacgacgacgactgg 11445056



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 6403106 ctccccgagcgacgacgacgactgg 6403082



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 57      tcccctagcgacgacgacgactgg 80
               ||||| ||||||||||||||||||
Sbjct: 1628056 tccccgagcgacgacgacgactgg 1628079
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 16110007 ctccccgagcgacgacgacgactgg 16109983



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 16044383 ctccccgagcgacgacgacgactgg 16044359



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 14447984 ctccccgagcgacgacgacgactgg 14448008
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 5147504 ctccccgagcgacgacgacgactgg 5147480
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 11108041 ctccccgagcgacgacgacgactgg 11108017



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 4771413 ctccccgagcgacgacgacgactgg 4771437
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 10151533 ctccccgagcgacgacgacgactgg 10151509
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 12148182 ctccccaagcgacgacgacgactgg 12148158
to top
>dbj|AP003205.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1146B04
          Length = 145186

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 86446 ctccccgagcgacgacgacgactgg 86470
to top
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0537A05
          Length = 152396

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 11083 ctccccgagcgacgacgacgactgg 11107
to top
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1135C02
          Length = 152306

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 85088 ctccccgagcgacgacgacgactgg 85112
to top
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0031P18
          Length = 156535

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 87542 ctccccgagcgacgacgacgactgg 87518
to top
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0026P23
          Length = 180188

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 56     ctcccctagcgacgacgacgactgg 80
              |||||| ||||||||||||||||||
Sbjct: 167096 ctccccgagcgacgacgacgactgg 167072
to top
>dbj|AP004692.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0455A11
          Length = 158629

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 56     ctcccctagcgacgacgacgactgg 80
              |||||| ||||||||||||||||||
Sbjct: 129429 ctccccgagcgacgacgacgactgg 129453
to top
>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026D20
          Length = 130634

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 96487 ctccccaagcgacgacgacgactgg 96463
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 78647 ctccccgagcgacgacgacgactgg 78623
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>gb|AF162221.1|AF162221 Xestia c-nigrum granulovirus genome, complete sequence
          Length = 178733

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 363   tctacgcgagtggaaaatatc 383
             |||||||||||||||||||||
Sbjct: 12933 tctacgcgagtggaaaatatc 12953
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>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for
            class III peroxidase 13 precursor, exons 1-3
          Length = 9315

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 56   ctcccctagcgacgacgacgactgg 80
            |||||| ||||||||||||||||||
Sbjct: 6972 ctccccgagcgacgacgacgactgg 6996
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 66557 ctccccgagcgacgacgacgactgg 66533
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 5148291 ctccccgagcgacgacgacgactgg 5148267
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 16200029 ctccccgagcgacgacgacgactgg 16200005



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 16137565 ctccccgagcgacgacgacgactgg 16137541



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 14529985 ctccccgagcgacgacgacgactgg 14530009
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 56       ctcccctagcgacgacgacgactgg 80
                |||||| ||||||||||||||||||
Sbjct: 11444751 ctccccgagcgacgacgacgactgg 11444727



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 56      ctcccctagcgacgacgacgactgg 80
               |||||| ||||||||||||||||||
Sbjct: 6402981 ctccccgagcgacgacgacgactgg 6402957



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 57      tcccctagcgacgacgacgactgg 80
               ||||| ||||||||||||||||||
Sbjct: 1628036 tccccgagcgacgacgacgactgg 1628059
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>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 167806

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 91884 ctccccgagcgacgacgacgactgg 91908
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>emb|AL732649.3|CNS08C9O Oryza sativa chromosome 12, . BAC OSJNBb0067N05 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109555

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    ctcccctagcgacgacgacgactgg 80
             |||||| ||||||||||||||||||
Sbjct: 64654 ctccccgagcgacgacgacgactgg 64630
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>gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207847

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 374   ggaaaatatccaatagaaga 393
             ||||||||||||||||||||
Sbjct: 47040 ggaaaatatccaatagaaga 47021
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>gb|AC163661.4| Mus musculus BAC clone RP23-288B18 from chromosome 10, complete sequence
          Length = 210846

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ttgacctcccccaacccccg 32
              ||||||||||||||||||||
Sbjct: 127081 ttgacctcccccaacccccg 127062
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 190    ccgcaacgacaggcgcgggtaccgccgc 217
              |||||||||||||||| || ||||||||
Sbjct: 242834 ccgcaacgacaggcgcaggcaccgccgc 242807
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>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 14     tgacctcccccaacccccgt 33
              ||||||||||||||||||||
Sbjct: 101072 tgacctcccccaacccccgt 101053
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 126     gcgagccggccggcggcgcc 145
               ||||||||||||||||||||
Sbjct: 1009202 gcgagccggccggcggcgcc 1009221
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>gb|AC139755.3| Mus musculus BAC clone RP24-96N20 from chromosome 6, complete sequence
          Length = 192869

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 375   gaaaatatccaatagaagacagtt 398
             ||||||||||||||||||| ||||
Sbjct: 40075 gaaaatatccaatagaagaaagtt 40098
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>ref|XM_842923.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0318)
           partial mRNA
          Length = 1440

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 190 ccgcaacgacaggcgcgggtaccgccgc 217
           |||||||||||||||| || ||||||||
Sbjct: 658 ccgcaacgacaggcgcaggcaccgccgc 631
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>ref|XM_756964.1| Ustilago maydis 521 hypothetical protein (UM05910.1) partial mRNA
          Length = 1185

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 120 tccccagcgagccggccggc 139
           ||||||||||||||||||||
Sbjct: 620 tccccagcgagccggccggc 639
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>gb|AC121926.3| Mus musculus BAC clone RP24-202B3 from chromosome 10, complete sequence
          Length = 185398

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ttgacctcccccaacccccg 32
             ||||||||||||||||||||
Sbjct: 52832 ttgacctcccccaacccccg 52813
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>emb|Z83840.7|HS216E10 Human DNA sequence from clone CTA-216E10 on chromosome 22, complete
             sequence
          Length = 122320

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    cttgacctcccccaaccccc 31
             ||||||||||||||||||||
Sbjct: 77805 cttgacctcccccaaccccc 77786
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>gb|AC163098.4| Mus musculus chromosome 19, clone RP23-262J17, complete sequence
          Length = 170948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cttgacctcccccaaccccc 31
             ||||||||||||||||||||
Sbjct: 97826 cttgacctcccccaaccccc 97845
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 71      cgacgactgggcggcgacgc 90
               ||||||||||||||||||||
Sbjct: 1372438 cgacgactgggcggcgacgc 1372419
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>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 126    gcgagccggccggcggcgcc 145
              ||||||||||||||||||||
Sbjct: 324917 gcgagccggccggcggcgcc 324936
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>emb|BX248337.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             4/14
          Length = 327650

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   gcgagccggccggcggcgcc 145
             ||||||||||||||||||||
Sbjct: 22655 gcgagccggccggcggcgcc 22674
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    ggttgaggtcgaagtcacca 185
              ||||||||||||||||||||
Sbjct: 147322 ggttgaggtcgaagtcacca 147303
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>gb|AF078737.1|AF078737 Caldicellulosiruptor sp. Tok7B.1 XynA (xynA) and CelB (celB) genes,
            complete cds; and unknown genes
          Length = 11707

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 253  cagcgaccccgacaccgaca 272
            ||||||||||||||||||||
Sbjct: 8053 cagcgaccccgacaccgaca 8072
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 198     acaggcgcgggtaccgccgcgtgg 221
               |||||||||| |||||||||||||
Sbjct: 6342704 acaggcgcggataccgccgcgtgg 6342681
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>emb|AL626767.15| Mouse DNA sequence from clone RP23-421C7 on chromosome 4, complete
              sequence
          Length = 199694

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 374    ggaaaatatccaatagaaga 393
              ||||||||||||||||||||
Sbjct: 181697 ggaaaatatccaatagaaga 181716
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>gb|AC120557.12| Mus musculus chromosome 19, clone RP24-493E6, complete sequence
          Length = 169131

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cttgacctcccccaaccccc 31
             ||||||||||||||||||||
Sbjct: 40492 cttgacctcccccaaccccc 40511
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>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 91883

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 57    tcccctagcgacgacgacgactgg 80
             ||||| ||||||||||||||||||
Sbjct: 64868 tccccgagcgacgacgacgactgg 64845
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>gb|AC146298.4| Mus musculus BAC clone RP23-214O2 from 6, complete sequence
          Length = 180505

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 375    gaaaatatccaatagaagacagtt 398
              ||||||||||||||||||| ||||
Sbjct: 152400 gaaaatatccaatagaagaaagtt 152423
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>emb|AL845479.8| Mouse DNA sequence from clone RP23-232N20 on chromosome 2, complete
             sequence
          Length = 102283

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    ctcccccaacccccgtgcgaagcc 41
             ||||||||||||||||| ||||||
Sbjct: 84069 ctcccccaacccccgtgagaagcc 84092


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,079,706
Number of Sequences: 3902068
Number of extensions: 3079706
Number of successful extensions: 77933
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 76223
Number of HSP's gapped (non-prelim): 1710
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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