Clone Name | bastl05c09 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete s... | 40 | 3.3 | 2 | gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold | 40 | 3.3 | 3 | ref|XM_575580.1| PREDICTED: Rattus norvegicus similar to MGC2201... | 40 | 3.3 |
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>gb|AC123541.3| Oryctolagus cuniculus clone LB1-184A7, complete sequence Length = 190901 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tctcaattcccgctccccgc 63 |||||||||||||||||||| Sbjct: 91276 tctcaattcccgctccccgc 91295
>gb|DP000006.1| Oryctolagus cuniculus target 1 genomic scaffold Length = 1889755 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 tctcaattcccgctccccgc 63 |||||||||||||||||||| Sbjct: 1790130 tctcaattcccgctccccgc 1790149
>ref|XM_575580.1| PREDICTED: Rattus norvegicus similar to MGC22014 protein (LOC500229), mRNA Length = 7317 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 gctccagctctcctccggct 251 |||||||||||||||||||| Sbjct: 1210 gctccagctctcctccggct 1229 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 661,068 Number of Sequences: 3902068 Number of extensions: 661068 Number of successful extensions: 24147 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 3 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24144 Number of HSP's gapped (non-prelim): 3 length of query: 255 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 233 effective length of database: 17,147,199,772 effective search space: 3995297546876 effective search space used: 3995297546876 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)