Clone Name | bastl05c05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_191895.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2382 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 423 ggaggcggagggagggggccgggcgcgggaccggtgccagcgtccgcgaggaagctggtg 482 ||||| |||||||||||| ||| ||||| || ||||| | ||||||||||||||||||| Sbjct: 1195 ggagggggagggaggggggcggcggcggggccagtgccggggtccgcgaggaagctggtg 1254 Query: 483 caggggct 490 |||||||| Sbjct: 1255 caggggct 1262 Score = 69.9 bits (35), Expect = 7e-09 Identities = 63/71 (88%), Gaps = 6/71 (8%) Strand = Plus / Plus Query: 189 cgcatcgagctatataaaggtaggcgagggggaagcacggagggagggttttggaattt- 247 ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 925 cgcatcgagctatataaaggtaggcgaggcggaggc----agggagggttttggaatttt 980 Query: 248 -ggccgccgtt 257 |||||||||| Sbjct: 981 cggccgccgtt 991
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 423 ggaggcggagggagggggccgggcgcgggaccggtgccagcgtccgcgaggaagctggtg 482 ||||| |||||||||||| ||| ||||| || ||||| | ||||||||||||||||||| Sbjct: 27103035 ggagggggagggaggggggcggcggcggggccagtgccggggtccgcgaggaagctggtg 27102976 Query: 483 caggggct 490 |||||||| Sbjct: 27102975 caggggct 27102968 Score = 69.9 bits (35), Expect = 7e-09 Identities = 63/71 (88%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 189 cgcatcgagctatataaaggtaggcgagggggaagcacggagggagggttttggaattt- 247 ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 27103313 cgcatcgagctatataaaggtaggcgaggcggaggc----agggagggttttggaatttt 27103258 Query: 248 -ggccgccgtt 257 |||||||||| Sbjct: 27103257 cggccgccgtt 27103247 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 agcggaggaggaggaggcgctg 314 |||||||||||||||||||||| Sbjct: 11428692 agcggaggaggaggaggcgctg 11428671 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggaggaggaggaggcgctg 314 |||||||||||||||||||| Sbjct: 29399008 cggaggaggaggaggcgctg 29399027
>dbj|AP003284.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0671D01 Length = 163006 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 423 ggaggcggagggagggggccgggcgcgggaccggtgccagcgtccgcgaggaagctggtg 482 ||||| |||||||||||| ||| ||||| || ||||| | ||||||||||||||||||| Sbjct: 161866 ggagggggagggaggggggcggcggcggggccagtgccggggtccgcgaggaagctggtg 161807 Query: 483 caggggct 490 |||||||| Sbjct: 161806 caggggct 161799 Score = 69.9 bits (35), Expect = 7e-09 Identities = 63/71 (88%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 189 cgcatcgagctatataaaggtaggcgagggggaagcacggagggagggttttggaattt- 247 ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 162144 cgcatcgagctatataaaggtaggcgaggcggaggc----agggagggttttggaatttt 162089 Query: 248 -ggccgccgtt 257 |||||||||| Sbjct: 162088 cggccgccgtt 162078
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 423 ggaggcggagggagggggccgggcgcgggaccggtgccagcgtccgcgaggaagctggtg 482 ||||| |||||||||||| ||| ||||| || ||||| | ||||||||||||||||||| Sbjct: 10713 ggagggggagggaggggggcggcggcggggccagtgccggggtccgcgaggaagctggtg 10654 Query: 483 caggggct 490 |||||||| Sbjct: 10653 caggggct 10646 Score = 69.9 bits (35), Expect = 7e-09 Identities = 63/71 (88%), Gaps = 6/71 (8%) Strand = Plus / Minus Query: 189 cgcatcgagctatataaaggtaggcgagggggaagcacggagggagggttttggaattt- 247 ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||| Sbjct: 10991 cgcatcgagctatataaaggtaggcgaggcggaggc----agggagggttttggaatttt 10936 Query: 248 -ggccgccgtt 257 |||||||||| Sbjct: 10935 cggccgccgtt 10925
>dbj|AK102816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108M16, full insert sequence Length = 3073 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 423 ggaggcggagggagggggccgggcgcgggaccggtgccagcgtccgcgaggaagctggtg 482 ||||| |||||||||||| ||| ||||| || ||||| | ||||||||||||||||||| Sbjct: 240 ggagggggagggaggggggcggcggcggggccagtgccggggtccgcgaggaagctggtg 299 Query: 483 caggggct 490 |||||||| Sbjct: 300 caggggct 307
>emb|AL954147.12| Zebrafish DNA sequence from clone CH211-117H23 in linkage group 24, complete sequence Length = 188067 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 |||||||||||||||||||||||| Sbjct: 112970 acacacacatacacacgagcgcgc 112947
>gb|AC170421.7| Rhesus Macaque 14 BAC CH250-340G19 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 169902 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 332 accctctaacacacacatacacac 355 |||||||||||||||||||||||| Sbjct: 31291 accctctaacacacacatacacac 31314
>gb|AC123697.19| Mus musculus chromosome 5, clone RP23-329M7, complete sequence Length = 183171 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 287 agcggaagcggaggaggaggagg 309 ||||||||||||||||||||||| Sbjct: 175085 agcggaagcggaggaggaggagg 175107
>gb|AY332515.1| Zacco pachycephalus clone ZD582 microsatellite sequence Length = 702 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 accctctaacacacacatacaca 354 ||||||||||||||||||||||| Sbjct: 247 accctctaacacacacatacaca 269
>gb|AC140185.3| Mus musculus BAC clone RP24-363A3 from chromosome 5, complete sequence Length = 169091 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 287 agcggaagcggaggaggaggagg 309 ||||||||||||||||||||||| Sbjct: 103580 agcggaagcggaggaggaggagg 103602
>gb|AY753327.1| Shrimp white spot syndrome virus isolate TH-96-II nonfunctional ORF14 gene, complete sequence; ORFI, ORFII, ORFIII, ORFIV, ORFV, and ORF15 genes, complete cds; and ORF16 gene, partial cds Length = 7800 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 agcggaagcggaggaggaggagg 309 ||||||||||||||||||||||| Sbjct: 6134 agcggaagcggaggaggaggagg 6112
>gb|AF440570.1| Shrimp white spot syndrome virus, complete genome Length = 307287 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 agcggaagcggaggaggaggagg 309 ||||||||||||||||||||||| Sbjct: 302085 agcggaagcggaggaggaggagg 302063
>emb|CR854957.11| Zebrafish DNA sequence from clone DKEY-211C10 in linkage group 16, complete sequence Length = 131039 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 332 accctctaacacacacatacaca 354 ||||||||||||||||||||||| Sbjct: 82420 accctctaacacacacatacaca 82442
>gb|AC113980.29| Mus musculus chromosome 5, clone RP24-63G23, complete sequence Length = 193657 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 287 agcggaagcggaggaggaggagg 309 ||||||||||||||||||||||| Sbjct: 149790 agcggaagcggaggaggaggagg 149768
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence Length = 193518 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgctc 365 ||||||||| |||||||||||||||| Sbjct: 182599 acacacacacacacacgagcgcgctc 182624
>gb|AY022848.1| Oryza sativa microsatellite MRG5173 containing (CGG)X8, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 121 gcggaagcggaggaggaggagg 142
>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0017N18, complete sequence Length = 156643 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 cgaggaagctggtgcaggggct 490 |||||||||||||||||||||| Sbjct: 147890 cgaggaagctggtgcaggggct 147911
>gb|AC098573.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_G11, complete sequence Length = 112796 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 cgaggaagctggtgcaggggct 490 |||||||||||||||||||||| Sbjct: 38811 cgaggaagctggtgcaggggct 38832
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 7738246 gcggaagcggaggaggaggagg 7738225 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gaagcggaggaggaggaggcg 311 ||||||||||||||||||||| Sbjct: 30628760 gaagcggaggaggaggaggcg 30628780 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 27154168 ggaagcggaggaggaggagg 27154187 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 agcggcggaggaggcggagg 433 |||||||||||||||||||| Sbjct: 24076148 agcggcggaggaggcggagg 24076167 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 9829211 ggaagcggaggaggaggagg 9829192
>ref|XM_001001003.1| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 824 ggaagcggaggaggaggaggcg 803
>ref|XM_922920.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 8 (Kctd17), mRNA Length = 1182 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 824 ggaagcggaggaggaggaggcg 803
>ref|XM_900696.2| PREDICTED: Mus musculus potassium channel tetramerisation domain containing 17, transcript variant 3 (Kctd17), mRNA Length = 1182 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 824 ggaagcggaggaggaggaggcg 803
>gb|AC003007.1|HUAC003007 Human Chromosome 16 BAC clone CIT987SK-A-61E3, complete sequence Length = 113916 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 13968 ggaagcggaggaggaggaggcg 13947
>gb|AC114004.5| Mus musculus BAC clone RP23-174P2 from 7, complete sequence Length = 187196 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 ggaggaggcggagggagggggc 441 |||||||||||||||||||||| Sbjct: 72059 ggaggaggcggagggagggggc 72080
>gb|AC124531.5| Mus musculus BAC clone RP23-299D2 from 7, complete sequence Length = 191228 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 420 ggaggaggcggagggagggggc 441 |||||||||||||||||||||| Sbjct: 52854 ggaggaggcggagggagggggc 52875
>gb|AC009124.8| Homo sapiens chromosome 16 clone RP11-489A11, complete sequence Length = 168268 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 140429 ggaagcggaggaggaggaggcg 140450
>emb|AJ851592.1| Gallus gallus mRNA for hypothetical protein, clone 9m9 Length = 5388 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 296 ggaggaggaggaggcgctgttgctgc 321 ||||||||||||||||||| |||||| Sbjct: 5052 ggaggaggaggaggcgctgctgctgc 5027
>ref|NM_010460.2| Mus musculus homeo box B7 (Hoxb7), mRNA Length = 1269 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 707 gcggaagcggaggaggaggagg 728
>gb|AC120780.32| Pan troglodytes clone rp43-22b16, complete sequence Length = 193047 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 74714 ggaagcggaggaggaggaggcg 74693
>dbj|AK136706.1| Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230026O03 product:homeo box B7, full insert sequence Length = 915 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 707 gcggaagcggaggaggaggagg 728
>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence Length = 200594 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 91858 ggaagcggaggaggaggaggcg 91879
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 cgaggaagctggtgcaggggct 490 |||||||||||||||||||||| Sbjct: 28720098 cgaggaagctggtgcaggggct 28720119 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 tccggcggcgaggatgagcggcgg 421 ||||||||||||||||| |||||| Sbjct: 28000025 tccggcggcgaggatgaccggcgg 28000048 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 atgagcggcggaggaggcgg 430 |||||||||||||||||||| Sbjct: 17505984 atgagcggcggaggaggcgg 17506003
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 7736081 gcggaagcggaggaggaggagg 7736060 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gaagcggaggaggaggaggcg 311 ||||||||||||||||||||| Sbjct: 30720182 gaagcggaggaggaggaggcg 30720202 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 27245491 ggaagcggaggaggaggagg 27245510 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 agcggcggaggaggcggagg 433 |||||||||||||||||||| Sbjct: 23993617 agcggcggaggaggcggagg 23993636 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 9827332 ggaagcggaggaggaggagg 9827313
>gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-196F5, complete sequence Length = 181320 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 85383 gcggaagcggaggaggaggagg 85404
>gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete sequence Length = 133980 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgctc 365 ||||||||| |||||||||||||||| Sbjct: 52799 acacacacacacacacgagcgcgctc 52824
>ref|XM_217075.3| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ12242 (predicted) (LOC300317), mRNA Length = 2004 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 1658 ggaagcggaggaggaggaggcg 1637
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 293 agcggaggaggaggaggcgctg 314 |||||||||||||||||||||| Sbjct: 65890 agcggaggaggaggaggcgctg 65869
>ref|XM_564413.1| Anopheles gambiae str. PEST ENSANGP00000025865 (ENSANGG00000024282), partial mRNA Length = 789 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 515 gcggaagcggaggaggaggagg 536
>dbj|AK102861.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111I03, full insert sequence Length = 3066 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 cgaggaagctggtgcaggggct 490 |||||||||||||||||||||| Sbjct: 255 cgaggaagctggtgcaggggct 276
>dbj|AK100204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041E07, full insert sequence Length = 2909 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 469 cgaggaagctggtgcaggggct 490 |||||||||||||||||||||| Sbjct: 71 cgaggaagctggtgcaggggct 92
>gb|AC133539.2| Homo sapiens chromosome 16 clone GS1-21A4, complete sequence Length = 108508 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 71940 ggaagcggaggaggaggaggcg 71919
>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence Length = 230518 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgctc 365 ||||||||| |||||||||||||||| Sbjct: 215167 acacacacacacacacgagcgcgctc 215192
>emb|AL590144.10| Mouse DNA sequence from clone RP23-79F10 on chromosome 15, complete sequence Length = 166677 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggcg 311 |||||||||||||||||||||| Sbjct: 140885 ggaagcggaggaggaggaggcg 140906
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 114548 gcggaagcggaggaggaggagg 114569
>gb|M18167.1|MUSHOX222 Mouse homeobox mh22b (Hox-2.3) DNA Length = 750 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 311 gcggaagcggaggaggaggagg 332
>dbj|AB028208.1| Branchiostoma floridae AmphiHox4 gene, complete cds Length = 3608 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgctc 365 ||||||||| |||||||||||||||| Sbjct: 2204 acacacacacacacacgagcgcgctc 2179
>emb|AL645478.15| Mouse DNA sequence from clone RP23-85A17 on chromosome 11, complete sequence Length = 121560 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggagg 309 |||||||||||||||||||||| Sbjct: 104201 gcggaagcggaggaggaggagg 104222
>gb|AC138358.12| Mus musculus chromosome 1, clone RP24-147G10, complete sequence Length = 180227 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 94136 ctctaacacacacatacacac 94116
>ref|XM_469766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 797 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 291 gaagcggaggaggaggaggcg 311 ||||||||||||||||||||| Sbjct: 230 gaagcggaggaggaggaggcg 250
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 1930545 gcggaggaggaggaggcgctg 1930565
>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence Length = 193784 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 107819 ctctaacacacacatacacac 107839
>ref|XM_602379.2| PREDICTED: Bos taurus similar to Double-stranded RNA-specific editase B2 (dsRNA adenosine deaminase B2) (RNA dependent adenosine deaminase 3) (RNA editing deaminase 2) (RNA editing enzyme 2) (LOC524061), mRNA Length = 3837 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 292 aagcggaggaggaggaggcgc 312 ||||||||||||||||||||| Sbjct: 871 aagcggaggaggaggaggcgc 891
>ref|XM_655401.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2889.2), mRNA Length = 2532 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 289 cggaagcggaggaggaggagg 309 ||||||||||||||||||||| Sbjct: 650 cggaagcggaggaggaggagg 670
>gb|AC154508.2| Mus musculus BAC clone RP24-96P6 from chromosome 16, complete sequence Length = 214625 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 110742 ctctaacacacacatacacac 110762
>gb|AC006387.3| Homo sapiens BAC clone CTA-360L10 from 7, complete sequence Length = 138764 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 138192 ctctaacacacacatacacac 138172
>gb|AC099524.5| Homo sapiens chromosome 16 clone RP11-960L18, complete sequence Length = 184518 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggcgctg 314 ||||| ||||||||||||||||||| Sbjct: 122578 ggaagaggaggaggaggaggcgctg 122602
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 gaagcggaggaggaggaggcg 311 ||||||||||||||||||||| Sbjct: 133632 gaagcggaggaggaggaggcg 133612
>gb|AC146037.1| Pan troglodytes BAC clone RP43-44A5 from 7, complete sequence Length = 177637 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 157704 ctctaacacacacatacacac 157724
>ref|XM_854491.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 15 (LOC474415), mRNA Length = 1650 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 71 gagcggcggaggaggcggagg 51
>ref|XM_531647.2| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 1 (LOC474415), mRNA Length = 1684 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 71 gagcggcggaggaggcggagg 51
>ref|XM_854425.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 14 (LOC474415), mRNA Length = 1764 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 73 gagcggcggaggaggcggagg 53
>ref|XM_854388.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 13 (LOC474415), mRNA Length = 1732 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 71 gagcggcggaggaggcggagg 51
>ref|XM_844581.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 2 (LOC474415), mRNA Length = 1739 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 39 gagcggcggaggaggcggagg 19
>ref|XM_854281.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 11 (LOC474415), mRNA Length = 1723 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 35 gagcggcggaggaggcggagg 15
>ref|XM_854130.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 7 (LOC474415), mRNA Length = 1715 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 39 gagcggcggaggaggcggagg 19
>ref|XM_854090.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 6 (LOC474415), mRNA Length = 1412 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 39 gagcggcggaggaggcggagg 19
>ref|XM_853979.1| PREDICTED: Canis familiaris similar to dynactin 2, transcript variant 3 (LOC474415), mRNA Length = 1756 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 413 gagcggcggaggaggcggagg 433 ||||||||||||||||||||| Sbjct: 71 gagcggcggaggaggcggagg 51
>emb|BX901891.12| Zebrafish DNA sequence from clone CH211-175N2 in linkage group 1, complete sequence Length = 148678 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgct 364 ||||||||| ||||||||||||||| Sbjct: 112687 acacacacacacacacgagcgcgct 112711
>emb|AL157937.21| Human DNA sequence from clone RP11-408N14 on chromosome 9 Contains a novel gene, complete sequence Length = 153783 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 339 aacacacacatacacacgagcgcgc 363 ||||||||||| ||||||||||||| Sbjct: 116555 aacacacacatgcacacgagcgcgc 116579
>emb|BX071709.1|CNS09RHT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC9BD08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 945 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 603 ggaagcggaggaggaggaggc 623
>emb|BX071708.1|CNS09RHS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC9BD08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 831 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 650 ggaagcggaggaggaggaggc 630
>emb|BX069992.1|CNS09Q64 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC6DE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 842 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 610 ggaagcggaggaggaggaggc 630
>emb|BX069991.1|CNS09Q63 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC6DE05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 923 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 667 ggaagcggaggaggaggaggc 647
>emb|BX027225.1|CNS08T65 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA40DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 972 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 623 ggaagcggaggaggaggaggc 643
>emb|BX027224.1|CNS08T64 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA40DB12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 986 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 670 ggaagcggaggaggaggaggc 650
>gb|AC154509.2| Mus musculus BAC clone RP23-207P21 from chromosome 16, complete sequence Length = 203692 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 167887 ctctaacacacacatacacac 167867
>emb|AL606622.3|OSJN00059 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0004N05, complete sequence Length = 158601 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 ggaggaggaggaggcgctgttgctg 320 ||||||||||||||||| ||||||| Sbjct: 3140 ggaggaggaggaggcgcggttgctg 3164
>emb|AL606607.3|OSJN00068 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065L13, complete sequence Length = 103039 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 ggaggaggaggaggcgctgttgctg 320 ||||||||||||||||| ||||||| Sbjct: 94437 ggaggaggaggaggcgcggttgctg 94461
>emb|AJ303456.1|RNO303456 Rattus norvegicus mRNA for WASP interacting protein (wip gene) Length = 3797 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 cagcggaagcggaggaggaggaggc 310 ||||||| ||||||||||||||||| Sbjct: 216 cagcggaggcggaggaggaggaggc 240
>emb|AL691431.20| Mouse DNA sequence from clone RP23-257P7 on chromosome 4 Contains the 5' end of a novel gene (2810031P15Rik), a ribosomal protein L10 (Rpl10) pseudogene, a ribosomal protein S6 (Rps6) pseudogene and two CpG islands, complete sequence Length = 199847 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 80060 ctctaacacacacatacacac 80040
>gb|BC072475.1| Rattus norvegicus Wiskott-Aldrich syndrome protein interacting protein, mRNA (cDNA clone MGC:91527 IMAGE:7100751), complete cds Length = 3968 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 cagcggaagcggaggaggaggaggc 310 ||||||| ||||||||||||||||| Sbjct: 383 cagcggaggcggaggaggaggaggc 407
>gb|AC023720.4| Drosophila melanogaster X BAC RP98-7F15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179205 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 72256 ggaagcggaggaggaggaggc 72236
>gb|AC010007.4| Drosophila melanogaster 3L BAC RP98-17K17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175481 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 144108 ggaagcggaggaggaggaggc 144088
>gb|AC010564.7| Drosophila melanogaster 3L BAC RP98-27O1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 196594 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 7814 ggaagcggaggaggaggaggc 7794
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 230 gggagggttttggaatttggc 250 ||||||||||||||||||||| Sbjct: 3621727 gggagggttttggaatttggc 3621707
>dbj|AB036512.1| Mus musculus gene for synaptotagmin II, exons 1 to 5, partial cds Length = 10446 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgctcgcc 368 ||||||||| |||||||||||||| |||| Sbjct: 6738 acacacacacacacacgagcgcgcacgcc 6766
>ref|NM_132991.1| Drosophila melanogaster CG12432-RA (CG12432), mRNA Length = 1734 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 632 gcggaggaggaggaggcgctg 652
>dbj|AK134690.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330525C11 product:unclassifiable, full insert sequence Length = 747 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 119 ctctaacacacacatacacac 99
>ref|XM_685893.1| PREDICTED: Danio rerio similar to anillin, actin binding protein (scraps homolog, Drosophila) (LOC562517), mRNA Length = 4092 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 39 ctctaacacacacatacacac 19
>gb|AC157661.2| Mus musculus BAC clone RP23-233F23 from chromosome 3, complete sequence Length = 195603 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 15153 ctctaacacacacatacacac 15173
>gb|AC092493.1|AC092493 Drosophila melanogaster, chromosome X, region 15C-15D, BAC clone BACR10J22, complete sequence Length = 157457 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 57177 gcggaggaggaggaggcgctg 57197
>gb|AC022347.2|AC022347 Drosophila melanogaster, chromosome X, region 15F-15F, BAC clone BACR35G15, complete sequence Length = 168615 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 131049 gcggaggaggaggaggcgctg 131029
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 ggaggaggaggaggcgctgttgctg 320 ||||||||||||||||| ||||||| Sbjct: 25516944 ggaggaggaggaggcgcggttgctg 25516968 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 ggaggaggcggagggagggg 439 |||||||||||||||||||| Sbjct: 35141675 ggaggaggcggagggagggg 35141694 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggaggcg 311 |||| ||||||||||||||||||| Sbjct: 12977334 gcggcagcggaggaggaggaggcg 12977311
>gb|AF257303.1|AF257303 Mus musculus synaptotagmin II (Syt2) gene, complete cds Length = 14497 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgctcgcc 368 ||||||||| |||||||||||||| |||| Sbjct: 6120 acacacacacacacacgagcgcgcacgcc 6148
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 14758131 gcggaggaggaggaggcgctg 14758151 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 288 gcggaagcggaggaggaggaggcg 311 |||||||||||||||| ||||||| Sbjct: 7754880 gcggaagcggaggaggcggaggcg 7754903
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 ggcgagggggaagcacggagggagg 235 ||||||||||||| ||||||||||| Sbjct: 4471672 ggcgagggggaagaacggagggagg 4471648
>gb|AC012512.7| Homo sapiens BAC clone RP11-561O7 from 2, complete sequence Length = 179460 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 174444 ctctaacacacacatacacac 174464
>gb|AC149286.4| Pan troglodytes BAC clone CH251-514L10 from chromosome 7, complete sequence Length = 180713 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 68206 ctctaacacacacatacacac 68186
>gb|AE009450.1| Brucella melitensis 16M chromosome I, section 7 of 195 of the complete sequence Length = 10722 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 2487 gcggaggaggaggaggcgctg 2467
>ref|NM_057192.2| Rattus norvegicus Wiskott-Aldrich syndrome protein interacting protein (Waspip), mRNA Length = 3968 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 286 cagcggaagcggaggaggaggaggc 310 ||||||| ||||||||||||||||| Sbjct: 383 cagcggaggcggaggaggaggaggc 407
>gb|AC062017.6| Homo sapiens BAC clone RP11-110K9 from 2, complete sequence Length = 180223 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 114121 ctctaacacacacatacacac 114141
>gb|AF298117.1|AF298117 Homo sapiens homeobox protein OTX2 gene, complete cds Length = 10728 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cctctaacacacacatacaca 354 ||||||||||||||||||||| Sbjct: 4230 cctctaacacacacatacaca 4210
>gb|AC084724.6| Homo sapiens BAC clone RP11-613O14 from 4, complete sequence Length = 172647 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 ccctctaacacacacatacacacga 357 |||||| |||||||||||||||||| Sbjct: 38899 ccctctgacacacacatacacacga 38923
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 211 ggcgagggggaagcacggagggagg 235 ||||||||||||| ||||||||||| Sbjct: 50391 ggcgagggggaagaacggagggagg 50367
>dbj|AP005636.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0707C02 Length = 163609 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 43520 gcggaggaggaggaggcgctg 43540
>dbj|AB073156.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC clone:F13F19 Length = 97397 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 403 cggcgaggatgagcggcggaggagg 427 ||||||||||||||| ||||||||| Sbjct: 59304 cggcgaggatgagcgccggaggagg 59280
>dbj|AK109888.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-E02, full insert sequence Length = 1110 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 291 gaagcggaggaggaggaggcg 311 ||||||||||||||||||||| Sbjct: 560 gaagcggaggaggaggaggcg 540
>ref|XM_308938.2| Anopheles gambiae str. PEST ENSANGP00000013162 (ENSANGG00000010673), mRNA Length = 945 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 339 ggaagcggaggaggaggaggc 319
>dbj|AK069500.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H01, full insert sequence Length = 1286 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 714 gcggaggaggaggaggcgctg 694
>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19, complete sequence Length = 199001 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 32625 ctctaacacacacatacacac 32645
>emb|BX548023.3| Zebrafish DNA sequence from clone DKEY-265O13 in linkage group 18, complete sequence Length = 151449 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 337 ctaacacacacatacacacgagcgcgctc 365 |||||||||||| ||||||| |||||||| Sbjct: 1954 ctaacacacacacacacacgcgcgcgctc 1926
>emb|AL928692.9| Zebrafish DNA sequence from clone CH211-208D15 in linkage group 12, complete sequence Length = 215891 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 341 cacacacatacacacgagcgcgctc 365 |||||||||||||||| |||||||| Sbjct: 14865 cacacacatacacacgcgcgcgctc 14889
>gb|AY104490.1| Zea mays PCO148580 mRNA sequence Length = 1155 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctgttgctgct 322 |||||||||||||||| |||| ||||||| Sbjct: 565 gcggaggaggaggaggagctgctgctgct 593
>gb|AE003505.3| Drosophila melanogaster chromosome X, section 57 of 74 of the complete sequence Length = 314205 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 gcggaggaggaggaggcgctg 314 ||||||||||||||||||||| Sbjct: 297441 gcggaggaggaggaggcgctg 297421
>gb|AE003471.3| Drosophila melanogaster chromosome 3L, section 5 of 83 of the complete sequence Length = 302131 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 130850 ggaagcggaggaggaggaggc 130830
>gb|AE003436.3| Drosophila melanogaster chromosome X, section 20 of 74 of the complete sequence Length = 317322 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 66994 ggaagcggaggaggaggaggc 67014
>emb|AL162831.6|CNS01RI2 Human chromosome 14 DNA sequence BAC R-1077A2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 208102 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cctctaacacacacatacaca 354 ||||||||||||||||||||| Sbjct: 160148 cctctaacacacacatacaca 160128
>emb|AL161757.4|CNS01RHK Human chromosome 14 DNA sequence BAC R-1085N6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 242832 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 334 cctctaacacacacatacaca 354 ||||||||||||||||||||| Sbjct: 62924 cctctaacacacacatacaca 62904
>emb|BX927408.6| Zebrafish DNA sequence from clone DKEY-30I4 in linkage group 18, complete sequence Length = 90451 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 337 ctaacacacacatacacacgagcgcgctc 365 |||||||||||| ||||||| |||||||| Sbjct: 47 ctaacacacacacacacacgcgcgcgctc 75
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 414 agcggcggaggaggcggaggg 434 ||||||||||||||||||||| Sbjct: 618564 agcggcggaggaggcggaggg 618584
>gb|AC005847.1|AC005847 Drosophila melanogaster DNA sequence (P1s DS03179 (D226), DS06357 (D230), DS03404 (D231), DS06962 (D232), and DS07291 (D240)), complete sequence Length = 268369 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggaggc 310 ||||||||||||||||||||| Sbjct: 81558 ggaagcggaggaggaggaggc 81578
>gb|L26305.1|MZERIP2A Zea mays ribosome-inactivating protein (RIP2) gene, complete cds Length = 963 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctgttgctgct 322 |||||||||||||||| |||| ||||||| Sbjct: 605 gcggaggaggaggaggagctgctgctgct 633
>gb|AC128704.4| Mus musculus BAC clone RP23-436H14 from 3, complete sequence Length = 212119 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 145336 ctctaacacacacatacacac 145356 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 18380 ctctaacacacacatacacac 18360
>gb|AC154178.1| Mus musculus BAC clone RP23-465N18 from 17, complete sequence Length = 191399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 77084 ctctaacacacacatacacac 77064
>gb|AC091313.11| Mus musculus chromosome 3, clone RP23-173I1, complete sequence Length = 202531 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 184385 ctctaacacacacatacacac 184365
>gb|DQ147033.1| Zea mays subsp. parviglumis isolate p3 ribosome inactivating protein 2 gene, partial cds Length = 639 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgctgttgctgct 322 |||||||||||||||| |||| ||||||| Sbjct: 439 gcggaggaggaggaggagctgctgctgct 467
>emb|AL596212.11| Mouse DNA sequence from clone RP23-176I6 on chromosome 11, complete sequence Length = 33838 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacacac 355 ||||||||||||||||||||| Sbjct: 20214 ctctaacacacacatacacac 20234
>gb|AC022346.4| Drosophila melanogaster clone BACR22I24, complete sequence Length = 181052 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 |||||||| ||||||||||||||| Sbjct: 149922 acacacacttacacacgagcgcgc 149899
>ref|NM_126268.2| Arabidopsis thaliana nucleic acid binding / transcription factor/ zinc ion binding AT2G02070 mRNA, complete cds Length = 2116 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 835 ggaagcggaggaggaggagg 854
>ref|NM_111698.3| Arabidopsis thaliana unknown protein AT3G08640 mRNA, complete cds Length = 1429 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agcggaagcggaggaggagg 306 |||||||||||||||||||| Sbjct: 335 agcggaagcggaggaggagg 354
>gb|AC112139.31| Mus musculus strain C57BL/6J clone rp23-170m6 map 6, complete sequence Length = 203032 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 128511 acacacacatacacacgcgcgcgc 128488
>gb|AC158357.4| Mus musculus BAC clone RP23-434L22 from chromosome 8, complete sequence Length = 217671 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 aggaagctggtgcaggggctcaag 494 |||||||||| ||||||||||||| Sbjct: 175791 aggaagctggggcaggggctcaag 175814
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 51422 acacacacatacacacgagc 51403
>gb|AC167247.2| Mus musculus BAC clone RP23-418C19 from chromosome 17, complete sequence Length = 185234 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 11376 acacacacatacacacgagc 11395
>gb|AC154204.2| Mus musculus BAC clone RP24-393D5 from chromosome 17, complete sequence Length = 183408 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 47527 tctaacacacacatacacac 47546
>ref|XM_483390.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1782 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggaggcg 311 ||||| |||||||||||||||||| Sbjct: 98 gcggaggcggaggaggaggaggcg 75
>ref|XM_507533.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.8-1 mRNA Length = 2581 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcggaggaggcggaggg 434 |||||||||||||||||||| Sbjct: 238 gcggcggaggaggcggaggg 257
>ref|XM_506986.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1175_B01.8-1 mRNA Length = 2610 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcggaggaggcggaggg 434 |||||||||||||||||||| Sbjct: 238 gcggcggaggaggcggaggg 257
>ref|XM_467901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2124 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 gcggcggaggaggcggaggg 434 |||||||||||||||||||| Sbjct: 240 gcggcggaggaggcggaggg 259
>ref|NM_197189.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0078O01.3), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gcggcggaggaggcggaggg 434 |||||||||||||||||||| Sbjct: 233 gcggcggaggaggcggaggg 214
>ref|NM_195288.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0040E17.23), mRNA Length = 1239 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 agcggcggaggaggcggagg 433 |||||||||||||||||||| Sbjct: 622 agcggcggaggaggcggagg 603
>ref|NM_191678.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 921 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggaggaggaggaggcgctg 314 |||||||||||||||||||| Sbjct: 29 cggaggaggaggaggcgctg 48
>gb|AC161798.6| Mus musculus chromosome 7, clone RP23-267I20, complete sequence Length = 182519 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 115220 acacacacatacacacgcgcgcgc 115197
>gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, complete sequence Length = 201596 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ttgtgggaggagctgctttg 388 |||||||||||||||||||| Sbjct: 192555 ttgtgggaggagctgctttg 192574
>gb|AC137618.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0090H02, complete sequence Length = 135231 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 atgagcggcggaggaggcgg 430 |||||||||||||||||||| Sbjct: 133334 atgagcggcggaggaggcgg 133353
>gb|AE000659.1|HUAE000659 Homo sapiens T-cell receptor alpha delta locus from bases 250472 to 501670 (section 2 of 5) of the Complete Nucleotide Sequence Length = 251199 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 96337 acacacacatacacacgagc 96318
>gb|AY023252.1| Oryza sativa microsatellite MRG5577 containing (GGA)X10, closest to marker R2754, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 tccggcggcgaggatgagcggcgg 421 ||||||||||||||||| |||||| Sbjct: 146 tccggcggcgaggatgaccggcgg 169
>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0069P02 map near S13580, complete sequence Length = 88044 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 agcggcggaggaggcggagg 433 |||||||||||||||||||| Sbjct: 15308 agcggcggaggaggcggagg 15289
>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence Length = 203423 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 31088 acacacacatacacacgcgcgcgc 31065
>gb|AC168064.3| Mus musculus BAC clone RP23-182K16 from chromosome 14, complete sequence Length = 220900 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 138181 acacacacacacacacgagcgcgc 138204
>gb|AC165091.3| Mus musculus BAC clone RP23-25M19 from chromosome 17, complete sequence Length = 198085 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 289 cggaagcggaggaggaggaggcgc 312 |||||| ||||||||||||||||| Sbjct: 18851 cggaagtggaggaggaggaggcgc 18828
>gb|AF213695.1| Nicotiana tabacum FH protein NFH1 mRNA, complete cds Length = 2834 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggaggcg 311 ||||||||||||| |||||||||| Sbjct: 1126 gcggaagcggaggcggaggaggcg 1103
>gb|AC117814.14| Mus musculus chromosome 15, clone RP24-572J18, complete sequence Length = 169092 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 accctctaacacacacatacacac 355 ||||||||||||||||| |||||| Sbjct: 2976 accctctaacacacacacacacac 2953
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 398 tccggcggcgaggatgagcggcgg 421 ||||||||||||||||| |||||| Sbjct: 80190 tccggcggcgaggatgaccggcgg 80213
>gb|AC009197.9| Drosophila melanogaster clone BACR14M08, complete sequence Length = 170053 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 taacacacacatacacacgagcgc 361 ||||||||||| |||||||||||| Sbjct: 106705 taacacacacacacacacgagcgc 106682
>ref|XM_868851.1| PREDICTED: Bos taurus hypothetical protein LOC616745 (LOC616745), mRNA Length = 2124 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 234 ggaagcggaggaggaggagg 253
>gb|AC114662.11| Mus musculus chromosome 1, clone RP24-170M24, complete sequence Length = 131587 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 43611 acacacacacacacacgagcgcgc 43588
>gb|AC134127.3| Rattus norvegicus 8 BAC CH230-24F13 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 49906 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 16643 tctaacacacacatacacac 16662
>gb|BT015312.1| Drosophila melanogaster AT04807 full insert cDNA Length = 4867 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 238 ggaagcggaggaggaggagg 257
>gb|AC099572.12| Mus musculus chromosome 15, clone RP23-16A17, complete sequence Length = 200229 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 81695 tctaacacacacatacacac 81676
>gb|AC102285.7| Mus musculus chromosome 19, clone RP24-329P13, complete sequence Length = 174894 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 169213 acacacacatacacacgagc 169194
>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete sequence Length = 121849 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 24723 ggaagcggaggaggaggagg 24704
>gb|AC018491.9| Drosophila melanogaster clone BACR11H15, complete sequence Length = 177953 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 20194 acacacacacacacacgagcgcgc 20171
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 43226 acacacacatacacacgagc 43207
>gb|AC120974.7| Rattus norvegicus 11 BAC CH230-358O2 (Children's Hospital Oakland Research Institute) complete sequence Length = 198650 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 111828 acacacacatacacacgagc 111847
>ref|XM_959093.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 2490 ggaagcggaggaggaggagg 2509
>ref|XM_330572.1| Neurospora crassa OR74A hypothetical protein (NCU03137.1) partial mRNA Length = 2619 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 2490 ggaagcggaggaggaggagg 2509
>gb|AY499247.1| Drosophila melanogaster strain India Quasimodo LTR retrotransposon and CG8591 (CTCF) gene, partial sequence Length = 1862 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 942 ggaagcggaggaggaggagg 961
>gb|AY499245.1| Drosophila melanogaster strain Kenya Quasimodo LTR retrotransposon and CG8591 (CTCF) gene, partial sequence Length = 1869 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 944 ggaagcggaggaggaggagg 963
>gb|AY499244.1| Drosophila melanogaster strain Germany Quasimodo LTR retrotransposon and CG8591 (CTCF) gene, partial sequence Length = 1869 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 944 ggaagcggaggaggaggagg 963
>gb|AY499243.1| Drosophila melanogaster strain California Quasimodo LTR retrotransposon and CG8591 (CTCF) gene, partial sequence Length = 1865 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 943 ggaagcggaggaggaggagg 962
>gb|AC140251.2| Mus musculus BAC clone RP24-289C19 from chromosome 12, complete sequence Length = 177652 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 112089 acacacacacacacacgagcgcgc 112066
>gb|AC104279.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1393_A07, complete sequence Length = 159932 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 atgagcggcggaggaggcgg 430 |||||||||||||||||||| Sbjct: 35789 atgagcggcggaggaggcgg 35808
>gb|DQ481667.1| Takifugu rubripes HoxCa gene cluster, complete sequence Length = 378763 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 242011 acacacacacacacacgagcgcgc 241988
>gb|AY331185.1| Mus musculus intermediate filament protein nestin (Nes) gene, 5' flanking sequence and 5' UTR Length = 4025 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 gacccagcggaagcggagga 301 |||||||||||||||||||| Sbjct: 3924 gacccagcggaagcggagga 3905
>gb|AC153972.6| Mus musculus 10 BAC RP24-383P4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182933 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 cctgtcagctttagatattc 62 |||||||||||||||||||| Sbjct: 112653 cctgtcagctttagatattc 112634
>gb|AC161537.7| Mus musculus chromosome 15, clone RP23-471J11, complete sequence Length = 188471 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 accctctaacacacacatacacac 355 ||||||||||||||||| |||||| Sbjct: 55506 accctctaacacacacacacacac 55529
>gb|AC158614.5| Mus musculus 10 BAC RP23-76C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223468 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 66502 ggaagcggaggaggaggagg 66521
>gb|AC134609.4| Mus musculus BAC clone RP23-69L14 from chromosome 7, complete sequence Length = 139760 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 19582 acacacacacacacacgagcgcgc 19605
>gb|AC128738.4| Mus musculus BAC clone RP24-106M4 from chromosome 7, complete sequence Length = 148567 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 128855 acacacacacacacacgagcgcgc 128878
>gb|AC004994.1| Homo sapiens PAC clone RP5-1194E15 from 7, complete sequence Length = 80331 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 23798 tctaacacacacatacacac 23779
>gb|AY466207.1| Litopenaeus vannamei microsatellite TUMXLV7.35 sequence Length = 727 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 657 ggaagcggaggaggaggagg 676
>gb|AC134548.5| Mus musculus BAC clone RP24-258K6 from chromosome 15, complete sequence Length = 177331 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 79752 acacacacacacacacgagcgcgc 79775
>gb|AC130822.3| Mus musculus BAC clone RP23-249G11 from chromosome 6, complete sequence Length = 186431 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 17629 acacacacatacacacgagc 17610
>gb|AC185537.1| Drosophila melanogaster clone BACR39I01, complete sequence Length = 161147 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 122100 acacacacacacacacgagcgcgc 122077
>gb|DQ484031.1| Gymnogyps californianus clone 197G microsatellite sequence Length = 1223 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 1063 ggaagcggaggaggaggagg 1082
>gb|DQ483426.1| Gymnogyps californianus clone 129H microsatellite sequence Length = 991 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 174 ggaagcggaggaggaggagg 155
>ref|XM_883526.1| Leishmania major strain Friedlin hypothetical protein (L8032.10) partial mRNA Length = 2673 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 gcggaggaggaggaggcgct 313 |||||||||||||||||||| Sbjct: 538 gcggaggaggaggaggcgct 557
>emb|CT027571.7| Mouse DNA sequence from clone RP24-354E11 on chromosome 16, complete sequence Length = 200541 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 89833 tctaacacacacatacacac 89814
>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end Length = 247462 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 294 gcggaggaggaggaggcgct 313 |||||||||||||||||||| Sbjct: 180349 gcggaggaggaggaggcgct 180330
>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5, complete sequence Length = 158289 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 342 acacacatacacacgagcgcgctc 365 ||||||| |||||||||||||||| Sbjct: 72976 acacacacacacacgagcgcgctc 72953
>emb|CR769785.19| Zebrafish DNA sequence from clone DKEY-1N3 in linkage group 13, complete sequence Length = 232168 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 187170 tctaacacacacatacacac 187189
>gb|AC145378.2| Pan troglodytes BAC clone RP43-56P12 from 7, complete sequence Length = 186835 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 180694 tctaacacacacatacacac 180675
>gb|AC140455.2| Mus musculus BAC clone RP23-24B2 from chromosome 18, complete sequence Length = 242533 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 125856 ggaagcggaggaggaggagg 125837
>gb|AC138312.3| Mus musculus BAC clone RP23-235K7 from chromosome 9, complete sequence Length = 176504 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 accctctaacacacacatacacac 355 ||||||||||||||||| |||||| Sbjct: 57597 accctctaacacacacacacacac 57620
>gb|AC124536.4| Mus musculus BAC clone RP23-332H4 from chromosome 3, complete sequence Length = 165047 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ctctaacacacacatacaca 354 |||||||||||||||||||| Sbjct: 12325 ctctaacacacacatacaca 12344
>ref|XM_548318.2| PREDICTED: Canis familiaris similar to Hypermethylated in cancer 1 protein (Hic-1) (Zinc finger and BTB domain containing protein 29) (LOC491198), mRNA Length = 2367 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 ggaggaggaggaggcgctgt 315 |||||||||||||||||||| Sbjct: 1377 ggaggaggaggaggcgctgt 1396
>gb|AC117260.3| Mus musculus BAC clone RP24-498G10 from chromosome 18, complete sequence Length = 211919 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 199302 ggaagcggaggaggaggagg 199283
>gb|AC121969.3| Mus musculus BAC clone RP24-273J2 from chromosome 3, complete sequence Length = 145945 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 21544 acacacacacacacacgagcgcgc 21567
>gb|AC127580.3| Mus musculus BAC clone RP23-447P16 from chromosome 12, complete sequence Length = 175727 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 accctctaacacacacatacacac 355 |||||| ||||||||||||||||| Sbjct: 25294 accctccaacacacacatacacac 25271
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence Length = 211478 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 accctctaacacacacatacacac 355 ||||||||||||||||| |||||| Sbjct: 121525 accctctaacacacacacacacac 121502
>gb|AC124700.3| Mus musculus BAC clone RP24-199L11 from chromosome 8, complete sequence Length = 163730 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 79475 acacacacatacacacgagc 79494
>gb|AC122190.4| Mus musculus BAC clone RP23-41J14 from 12, complete sequence Length = 179390 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 accctctaacacacacatacacac 355 |||||| ||||||||||||||||| Sbjct: 141518 accctccaacacacacatacacac 141495
>gb|AC122200.4| Mus musculus BAC clone RP23-64D23 from 6, complete sequence Length = 243483 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 47651 tctaacacacacatacacac 47670
>gb|AC122296.4| Mus musculus BAC clone RP23-265P8 from 6, complete sequence Length = 211697 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 21178 acacacacatacacacgagc 21197
>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence Length = 188791 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 aggaagctggtgcaggggctcaag 494 |||||||||| ||||||||||||| Sbjct: 12125 aggaagctggggcaggggctcaag 12148
>gb|AC125279.1| Mus musculus BAC clone RP23-433F5 from 8, complete sequence Length = 201197 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 48682 acacacacatacacacgcgcgcgc 48705
>gb|AC125277.1| Mus musculus BAC clone RP24-554P24 from 13, complete sequence Length = 141866 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 68391 acacacacatacacacgagc 68410
>gb|AC123042.2| Mus musculus BAC clone RP24-545O17 from 10, complete sequence Length = 177899 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 103831 acacacacatacacacgcgcgcgc 103854
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 gcggcggaggaggcggaggg 434 |||||||||||||||||||| Sbjct: 15456 gcggcggaggaggcggaggg 15437
>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06, complete sequence Length = 135774 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 89364 ggaagcggaggaggaggagg 89345
>gb|BC021887.1| Mus musculus paraoxonase 2, mRNA (cDNA clone MGC:11614 IMAGE:3154583), complete cds Length = 2710 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 2114 acacacacatacacacgcgcgcgc 2091
>gb|AC113127.6| Mus musculus chromosome 9, clone RP23-352H13, complete sequence Length = 185801 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 103280 acacacacatacacacgcgcgcgc 103257
>gb|AC102339.16| Mus musculus chromosome 18, clone RP24-573J7, complete sequence Length = 170154 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 accctctaacacacacatacacac 355 |||| ||||||||||||||||||| Sbjct: 47630 accccctaacacacacatacacac 47653
>gb|AC102092.7| Mus musculus chromosome 3, clone RP23-20B1, complete sequence Length = 234874 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ctctaacacacacatacaca 354 |||||||||||||||||||| Sbjct: 101970 ctctaacacacacatacaca 101951
>gb|AC145783.1| Pan troglodytes BAC clone RP43-27O9 from 7, complete sequence Length = 175651 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 149538 tctaacacacacatacacac 149519
>gb|AC142310.1| Pan troglodytes BAC clone RP43-45P13 from 7, complete sequence Length = 197471 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 63626 tctaacacacacatacacac 63607
>gb|AC119413.16| Medicago truncatula clone mth2-19p2, complete sequence Length = 113431 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 54477 ggaagcggaggaggaggagg 54458
>gb|AC157912.4| Mus musculus chromosome 19, clone RP24-241F10, complete sequence Length = 153690 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 107718 acacacacatacacacgagc 107737
>emb|CR954195.2| Medicago truncatula chromosome 5 clone mth2-16p13, COMPLETE SEQUENCE Length = 116834 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 97837 ggaagcggaggaggaggagg 97818
>emb|AL513543.14| Human DNA sequence from clone RP11-343J24 on chromosome 1 Contains part of the CHRM3 gene for cholinergic receptor muscarinic 3 and a novel gene (DKFZp667K2218), complete sequence Length = 90907 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 aaagtgggaagattagtttt 165 |||||||||||||||||||| Sbjct: 73104 aaagtgggaagattagtttt 73123
>emb|AL450398.9| Human DNA sequence from clone RP11-202P11 on chromosome 10 Contains the 3'end of a novel gene containing FLJ40604 and FLJ40930, complete sequence Length = 55063 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 9921 acacacacatacacacgagc 9902
>ref|XM_499647.1| Yarrowia lipolytica CLIB122, YALI0A01331g predicted mRNA Length = 1194 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ggtttccggcggcgaggatg 413 |||||||||||||||||||| Sbjct: 522 ggtttccggcggcgaggatg 541
>emb|AL392048.9| Human DNA sequence from clone RP11-305D15 on chromosome 13 Contains the 5' end of the RB1 gene for retinoblastoma 1 (including osteosarcoma), two novel genes, the gene for purinergic receptor (family A group 5) (P2Y5), a PEST-containing nuclear protein (PCNP) pseudogene, a KIAA0649 gene product pseudogene, the 3' end of a novel gene and three CpG islands, complete sequence Length = 137342 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 117784 tctaacacacacatacacac 117765
>gb|AC113189.11| Homo sapiens chromosome 17, clone RP11-104H15, complete sequence Length = 184349 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ggcggagggagggggccggg 445 |||||||||||||||||||| Sbjct: 43223 ggcggagggagggggccggg 43204
>emb|AL158211.29| Human DNA sequence from clone RP11-573G6 on chromosome 10 Contains a ribosomal protein L31 (RPL31) pseudogene, the BUP gene for BUP protein, the BMI1 gene for B lymphoma Mo-MLV insertion region (mouse) (MGC12685), the 5' end of the SPAG6 gene for sperm associated antigen 6 (pf16, MGC26276, Repro-SA-1,DKFZp434I153), the 5' end of a novel gene and seven CpG islands, complete sequence Length = 138094 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 gagggagggggccgggcgcg 449 |||||||||||||||||||| Sbjct: 75936 gagggagggggccgggcgcg 75955
>gb|BC055305.1| Mus musculus cDNA clone IMAGE:6395856, partial cds Length = 1469 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 930 acacacacatacacacgcgcgcgc 907
>gb|AC087722.2| Rattus norvegicus strain Brown Norway clone RP31-198L13, complete sequence Length = 150936 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 23870 acacacacatacacacgcgcgcgc 23893
>emb|AL122003.17|HSJ659I19 Human DNA sequence from clone RP4-659I19 on chromosome 1q42.11-42.3 Contains a chromosome 9 open reading frame 78 (C9orf78) pseudogene, a novel gene (MGC13186), the 3' end of a novel gene (FLJ11383) and a CpG island, complete sequence Length = 155065 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 58227 acacacacatacacacgcgcgcgc 58204
>emb|AL050349.27|HSDJ553F4 Human DNA sequence from clone RP4-553F4 on chromosome 20q11.21-13.13 Contains the PXMP4 gene for peroxisomal membrane protein 4 (24kDa), a novel gene, the ZNF341 gene for zinc finger protein 341, the C20orf178 gene encoding a protein similar to the Drosophila CG8055 protein, the RPL31P2 gene for ribosomal protein L31 pseudogene 2, the 3' end of a novel gene and two CpG islands, complete sequence Length = 155470 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 gaggaggcggagggaggggg 440 |||||||||||||||||||| Sbjct: 78822 gaggaggcggagggaggggg 78803
>gb|AC157581.2| Mus musculus chromosome 18, clone RP24-249P15, complete sequence Length = 176836 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 332 accctctaacacacacatacacac 355 |||| ||||||||||||||||||| Sbjct: 103172 accccctaacacacacatacacac 103149
>gb|AC158948.3| Mus musculus chromosome 1, clone RP24-263I3, complete sequence Length = 201046 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 130912 acacacacatacacacgcgcgcgc 130935
>gb|AC157799.3| Mus musculus chromosome 1, clone RP24-154L11, complete sequence Length = 159548 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 89242 acacacacatacacacgagc 89223
>emb|BX053872.1|CNS09DQC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31DC01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 124 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 gcggaggaggcggagggagg 437 |||||||||||||||||||| Sbjct: 78 gcggaggaggcggagggagg 59
>emb|BX015559.1|CNS08K63 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA23BE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 248 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 aacacacacatacacacgag 358 |||||||||||||||||||| Sbjct: 8 aacacacacatacacacgag 27
>gb|AY056174.1| Arabidopsis thaliana putative C2H2-type zinc finger protein (At2g02070) mRNA, complete cds Length = 2171 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 865 ggaagcggaggaggaggagg 884
>emb|X04727.1|DVENG Drosophila virilis en-gene (engrailed gene) involved in segmentation Length = 4192 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 cggaggaggaggaggcgctg 314 |||||||||||||||||||| Sbjct: 1273 cggaggaggaggaggcgctg 1254
>gb|AC156039.4| Mus musculus BAC clone RP23-24C2 from chromosome 10, complete sequence Length = 206634 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 161148 acacacacatacacacgcgcgcgc 161171
>gb|AC164614.3| Mus musculus BAC clone RP23-337L12 from chromosome 9, complete sequence Length = 215002 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||| |||||| Sbjct: 135281 acacacacatacacacgcgcgcgc 135258
>emb|AL663015.5|OSJN00213 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0068N06, complete sequence Length = 172895 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 gcggaagcggaggaggaggaggcg 311 |||| ||||||||||||||||||| Sbjct: 125593 gcggcagcggaggaggaggaggcg 125570
>emb|AL772148.6| Zebrafish DNA sequence from clone CH211-153C20 in linkage group 24 Contains part of a novel gene similar to human DECR2 (peroxisomal 2,4-dienoyl CoA reductase 2), a novel gene similar to human KIAA0665, a novel gene similar to human KIAA0683, a novel gene similar to human KIAA0590, part of a novel gene and three CpG islands, complete sequence Length = 161218 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||||||||||||| |||| Sbjct: 153039 acacacacatacacacgagagcgc 153062
>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12, complete sequence Length = 144670 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 ggaggaggcggagggagggg 439 |||||||||||||||||||| Sbjct: 78173 ggaggaggcggagggagggg 78192
>emb|AJ495797.1|OSA495797 Oryza sativa (japonica cultivar-group) mRNA for MYB28 protein Length = 1219 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 cggaggaggaggaggcgctg 314 |||||||||||||||||||| Sbjct: 129 cggaggaggaggaggcgctg 148
>emb|AL662868.15| Mouse DNA sequence from clone RP23-144P24 on chromosome 11 Contains three novel genes, the 5' end of the Galnt9 gene for UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 9 and a CpG island, complete sequence Length = 198647 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 116732 acacacacacacacacgagcgcgc 116709
>emb|BX511261.12| Zebrafish DNA sequence from clone DKEYP-59G7 in linkage group 1, complete sequence Length = 185266 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 tctaacacacacatacacac 355 |||||||||||||||||||| Sbjct: 161216 tctaacacacacatacacac 161197
>gb|DQ097906.1| Homo sapiens T cell receptor alpha variable 12-1 (TRAV12-1) gene, partial cds Length = 911 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 acacacacatacacacgagc 359 |||||||||||||||||||| Sbjct: 37 acacacacatacacacgagc 18
>gb|AF530913.1| Gossypium hirsutum homeodomain protein GhHOX1 mRNA, complete cds Length = 2525 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 ggaagcggaggaggaggagg 309 |||||||||||||||||||| Sbjct: 140 ggaagcggaggaggaggagg 159
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 agcggcggaggaggcggagg 433 |||||||||||||||||||| Sbjct: 102350 agcggcggaggaggcggagg 102331
>gb|AC087558.13| Mus musculus strain C57BL/6J chromosome 2 clone rp23-282p18, complete sequence Length = 217766 Score = 40.1 bits (20), Expect = 6.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 340 acacacacatacacacgagcgcgc 363 ||||||||| |||||||||||||| Sbjct: 111835 acacacacacacacacgagcgcgc 111858
>gb|AY128826.1| Arabidopsis thaliana unknown protein (At3g08640) mRNA, complete cds Length = 1132 Score = 40.1 bits (20), Expect = 6.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 agcggaagcggaggaggagg 306 |||||||||||||||||||| Sbjct: 223 agcggaagcggaggaggagg 242 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,706,764 Number of Sequences: 3902068 Number of extensions: 5706764 Number of successful extensions: 666435 Number of sequences better than 10.0: 402 Number of HSP's better than 10.0 without gapping: 417 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 656488 Number of HSP's gapped (non-prelim): 9925 length of query: 494 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 472 effective length of database: 17,147,199,772 effective search space: 8093478292384 effective search space used: 8093478292384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)