Clone Name | bastl05c01 |
---|---|
Clone Library Name | barley_pub |
>PALI_YARLI (Q7Z8R5) pH-response regulator protein palI/RIM9| Length = 728 Score = 38.5 bits (88), Expect = 0.010 Identities = 19/49 (38%), Positives = 23/49 (46%) Frame = +1 Query: 241 GRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNVFLGHNLQEMPPGM 387 G G P PHM G P H G N+ G+N+ GHN+ PP M Sbjct: 625 GLHQGAPPPPHMRGPPPHMGMGGPNMGGHNMG------GHNMGGPPPNM 667
>ZIM10_HUMAN (Q9ULJ6) Retinoic acid-induced protein 17 (PIAS-like protein| Zimp10) Length = 1067 Score = 34.3 bits (77), Expect = 0.18 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%) Frame = +1 Query: 61 NGSIETYVTGNQTHFNEGSVNVQGYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQASW 240 NG T+ + +++++G+VN +N P P T P G +LS + Sbjct: 476 NGQNNTFSGSSYSNYSQGNVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQD 535 Query: 241 GRPSGPP-TEPHMTGHP 288 +P PP +P+M+ P Sbjct: 536 VKPPFPPDIKPNMSALP 552
>S12A2_SQUAC (P55013) Solute carrier family 12 member 2 (Bumetanide-sensitive| sodium-(potassium)-chloride cotransporter 1) (NA-K-CL symporter) (NKCC) Length = 1191 Score = 33.9 bits (76), Expect = 0.24 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 13/84 (15%) Frame = +1 Query: 181 STEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHP----THFNEGSVNVQG------YN 330 S EP ++ QQQ S AS P M G+P T +EGS++ G Y+ Sbjct: 115 SDEPPLSSQQQPPPPSSASSAHGGHQPPSESMNGYPQNGDTMMSEGSLHSSGTGAHHYYD 174 Query: 331 LHASNVFL---GHNLQEMPPGMTH 393 H + +L GHN + P + H Sbjct: 175 THTNTYYLRTFGHNTIDAVPRIDH 198
>ZIM10_MOUSE (Q6P1E1) Retinoic acid-induced protein 17 (PIAS-like protein| Zimp10) Length = 1072 Score = 33.9 bits (76), Expect = 0.24 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 2/78 (2%) Frame = +1 Query: 61 NGSIETYVTGNQ-THFNEGSVNVQGYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQAS 237 NG T+ +G+ + +++GSVN +N P P T P G +LS + Sbjct: 482 NGQNNTFSSGSSYSSYSQGSVNRPPRPVPVANYPHSPVPGNPTPPMTPGSSIPPYLSPSQ 541 Query: 238 WGRPSGPP-TEPHMTGHP 288 +P PP +P+M+ P Sbjct: 542 DVKPPFPPDIKPNMSALP 559
>COE2_BRARE (O93375) Transcription factor COE2| Length = 579 Score = 32.3 bits (72), Expect = 0.69 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 2/114 (1%) Frame = +1 Query: 112 GSVNVQGYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPT 291 G + QGY +S++S YPS ST QQ ++ S + P + ++G P Sbjct: 449 GQTSGQGYTRNSSSLSPRGYPSSST------PQQSAYGSNGGMSYGAVPMSSLGVSGSP- 501 Query: 292 HFNEGSVNVQGYNLHASNVFLGHNLQEMPPGMTHSN--ISTAAFQQNTGTNTAY 447 FN S N Y + S+ PPG + S+ + ++F +T +A+ Sbjct: 502 GFNSASPNSSPYAIMPSS----------PPGSSSSSSLLPFSSFPSSTKQKSAF 545
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 32.3 bits (72), Expect = 0.69 Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 8/95 (8%) Frame = +1 Query: 139 FLASNVSVEPYPSGSTEPWVT---GQQQQSFLS-----QASWGRPSGPPTEPHMTGHPTH 294 ++A+ ++P P ++P + G QQ L QA RP PP +P M Sbjct: 2109 YVANQPGMQPQPGLQSQPGMQPQPGMHQQPSLQNLNAMQAGVPRPGVPPPQPAM------ 2162 Query: 295 FNEGSVNVQGYNLHASNVFLGHNLQEMPPGMTHSN 399 G +N QG L+ N GHN P MT+ N Sbjct: 2163 ---GGLNPQGQALNIMNP--GHN-----PNMTNMN 2187
>TSP4_XENLA (Q06441) Thrombospondin-4 precursor| Length = 955 Score = 31.6 bits (70), Expect = 1.2 Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 16/72 (22%) Frame = -2 Query: 380 GGISCKLCPRN---------TLEACRLYPCTF------TDPSLKCVGCPV-MCGSVGGPL 249 GG C CP ++ CRL PC T P KC CP GS + Sbjct: 301 GGFQCGPCPEGYTGNGVICTDVDECRLNPCFLGVRCINTSPGFKCESCPPGYTGSTIQGI 360 Query: 248 GLPQLAWDKKLC 213 G+ +K++C Sbjct: 361 GINFAKQNKQVC 372
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 31.2 bits (69), Expect = 1.5 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%) Frame = +1 Query: 244 RPSGPPTEP----HMTGHPTHFNEGSVNVQGYNLHASNVFLGHNLQEMP 378 RPS P E H G PT+FN NV +LH S + G L + P Sbjct: 1255 RPSLPEEEKLKLAHAKGPPTNFNSLPANVSKLHLHGSPRYPGGPLPDFP 1303
>LARP4_HUMAN (Q71RC2) La-related protein 4 (La ribonucleoprotein domain family| member 4) Length = 723 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/73 (30%), Positives = 35/73 (47%) Frame = +1 Query: 13 NMGSVPFVQDTSEPRANGSIETYVTGNQTHFNEGSVNVQGYNFLASNVSVEPYPSGSTEP 192 NMG PF ++ +P+ S G H EGSV++ + S +P+ P Sbjct: 364 NMGR-PFQKNRVKPQFRSS------GGSEHSTEGSVSLGDGQL--NRYSSRNFPAERHNP 414 Query: 193 WVTGQQQQSFLSQ 231 VTG Q+Q++L + Sbjct: 415 TVTGHQEQTYLQK 427
>NUP1_YEAST (P20676) Nucleoporin NUP1 (Nuclear pore protein NUP1)| Length = 1076 Score = 30.8 bits (68), Expect = 2.0 Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 11/152 (7%) Frame = +1 Query: 58 ANGSIETYVTGNQTHFNEGSVNVQGYN-FLASNVSVEPYPSGSTEPWVTGQQQQSFLSQA 234 ++G+ T NQ+ FN G+ G N F ++ S +P T Q + Sbjct: 870 SSGTAATGAASNQSSFNFGNNGAGGLNPFTSATSSTNANAGLFNKPPSTNAQNVNV---- 925 Query: 235 SWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNVFLGHNLQEMPPGMTHSNISTAA 414 P+ + TG+ + GSV N +A+ VF G N Q T S + ++ Sbjct: 926 --------PSAFNFTGNNSTPGGGSVFNMNGNTNANTVFAGSNNQP-HQSQTPSFNTNSS 976 Query: 415 FQQNTGTNTAYMSYND----------RPNDMF 480 F +T N + N RP+D+F Sbjct: 977 FTPSTVPNINFSGLNGGITNTATNALRPSDIF 1008
>PAKM_DROME (Q9VXE5) Serine/threonine-protein kinase PAK mbt (EC 2.7.11.1)| (p21-activated kinase-related protein) (Protein mushroom bodies tiny) Length = 639 Score = 30.4 bits (67), Expect = 2.6 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 2/94 (2%) Frame = +1 Query: 19 GSVPFVQDTSEPRANGSIETYVTGNQTHFNEGSVNVQGYNFLASNVSVEP-YPSGSTEPW 195 GS+P Q TS GS+ + N +H N G+ S S P YP+ Sbjct: 231 GSMPQQQQTSPV---GSVASGTRSNHSHTNNGN----------SGGSYPPMYPTSH---- 273 Query: 196 VTGQQQQSFLSQASWGRPSGP-PTEPHMTGHPTH 294 QQQQ QA G P PH HP H Sbjct: 274 ---QQQQQQQQQAKQGGDQNQNPLHPHAHPHPHH 304
>AT10A_HUMAN (O60312) Probable phospholipid-transporting ATPase VA (EC 3.6.3.1)| (ATPVA) (Aminophospholipid translocase VA) Length = 1499 Score = 30.4 bits (67), Expect = 2.6 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +1 Query: 355 GHNLQEMPPGMTHSNISTAAFQQNTGTNTAYMSYNDRPNDMFT 483 G N++E P N++ AAFQ + Y++Y D D+FT Sbjct: 1160 GQNMEEYRPRTFWFNMADAAFQSLVCFSIPYLAYYDSNVDLFT 1202
>CR1BD_BACTZ (Q9ZAZ5) Pesticidal crystal protein cry1Bd (Insecticidal| delta-endotoxin CryIB(d)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1231 Score = 30.0 bits (66), Expect = 3.4 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Frame = +1 Query: 172 PSG-STEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNV 348 PSG ++ W +A+ RP PH+ P S + + + N Sbjct: 302 PSGFASTNWFNNNAPSFSAIEAAIFRP------PHLLDFPEQLTIYSASSRWSSTQHMNY 355 Query: 349 FLGHNLQEMPPGMTHSNISTAAFQQNTGTNTAYMSYNDR 465 ++GH L P G T N ST NT N + + R Sbjct: 356 WVGHRLNFRPIGGT-LNTSTQGLTNNTSINPVTLQFTSR 393
>CR1BB_BACTU (Q45739) Pesticidal crystal protein cry1Bb (Insecticidal| delta-endotoxin CryIB(b)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1229 Score = 30.0 bits (66), Expect = 3.4 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Frame = +1 Query: 172 PSG-STEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNV 348 PSG ++ W +A+ RP PH+ P S + + + N Sbjct: 302 PSGFASTNWFNNNAPSFSAIEAAIFRP------PHLLDFPEQLTIYSASSRWSSTQHMNY 355 Query: 349 FLGHNLQEMPPGMTHSNISTAAFQQNTGTNTAYMSYNDR 465 ++GH L P G T N ST NT N + + R Sbjct: 356 WVGHRLNFRPIGGT-LNTSTQGLTNNTSINPVTLQFTSR 393
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 30.0 bits (66), Expect = 3.4 Identities = 26/96 (27%), Positives = 42/96 (43%) Frame = +1 Query: 58 ANGSIETYVTGNQTHFNEGSVNVQGYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQAS 237 + SIET + NQ ++NE + + + V V+P GS++ T + +S LS + Sbjct: 566 SKSSIETPPSYNQLNYNENLLRFFNSKPVTAPVEVDPPKVGSSDVSSTREDARSTLSPLN 625 Query: 238 WGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASN 345 SG +G H GS N+H S+ Sbjct: 626 GFEGSG------ASGSSGHLTSGS------NIHMSS 649
>CR1BC_BACTM (Q45774) Pesticidal crystal protein cry1Bc (Insecticidal| delta-endotoxin CryIB(c)) (Crystaline entomocidal protoxin) (140 kDa crystal protein) Length = 1233 Score = 30.0 bits (66), Expect = 3.4 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 1/99 (1%) Frame = +1 Query: 172 PSG-STEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNV 348 PSG ++ W +A+ RP PH+ P S + + + N Sbjct: 302 PSGFASTNWFNNNAPSFSAIEAAIFRP------PHLLDFPEQLTIYSASSRWSSTQHMNY 355 Query: 349 FLGHNLQEMPPGMTHSNISTAAFQQNTGTNTAYMSYNDR 465 ++GH L P G T N ST NT N + + R Sbjct: 356 WVGHRLNFRPIGGT-LNTSTQGLTNNTSINPVTLQFTSR 393
>TAXB1_HUMAN (Q86VP1) Tax1-binding protein 1 (TRAF6-binding protein)| Length = 789 Score = 29.6 bits (65), Expect = 4.4 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 61 NGSIETYVTGNQTHFNEGSVNVQGYNFLASNVSVEPYPSGS 183 N ++ T TGNQ N+ SVN AS V V+P PS + Sbjct: 473 NNNVFTKKTGNQQKVNDASVNTDPAT-SASTVDVKPSPSAA 512
>C19BA_BACUH (O86170) Pesticidal crystal protein cry19Ba (Insecticidal| delta-endotoxin CryXIXB(a)) (Crystaline entomocidal protoxin) (78 kDa crystal protein) Length = 682 Score = 29.6 bits (65), Expect = 4.4 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = +1 Query: 319 QGYNLHASNVFLGHNLQEMPPGMTHSNISTAAFQQNTGTNTAYMSYND 462 QGY+ + N GM H N S + + N NT Y SYN+ Sbjct: 645 QGYDTYDQNA----------NGMYHQNYSNSGYNYNQEYNTYYQSYNN 682
>CBP1_CAEEL (P34545) Protein cbp-1| Length = 2056 Score = 29.6 bits (65), Expect = 4.4 Identities = 19/64 (29%), Positives = 27/64 (42%) Frame = +1 Query: 130 GYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGS 309 G + L++ S+E +P+ S + T S G PSG P T P N G Sbjct: 18 GLDALSALESLEAFPTSSKD---TDVDNNPSTSAGGSGGPSGSTPHPQGTPQPAPSNNGG 74 Query: 310 VNVQ 321 N+Q Sbjct: 75 FNLQ 78
>PER2_VOLCA (P81132) Perphorin-2 (Perphorin II) (Fragment)| Length = 484 Score = 26.6 bits (57), Expect(2) = 4.5 Identities = 12/33 (36%), Positives = 14/33 (42%) Frame = -2 Query: 293 CVGCPVMCGSVGGPLGLPQLAWDKKLCCCCPVT 195 C +C S G P G A C CCPV+ Sbjct: 134 CTTLDQLCSSPGFPAGTCTAAMFDVACDCCPVS 166 Score = 21.6 bits (44), Expect(2) = 4.5 Identities = 8/18 (44%), Positives = 11/18 (61%) Frame = -1 Query: 114 PLIKMCLIPCHICLDRTI 61 P+I L PC +C+ TI Sbjct: 177 PVIPPVLRPCDVCIAATI 194
>NADE_MYCLE (Q9CBZ6) Glutamine-dependent NAD(+) synthetase (EC 6.3.5.1) (NAD(+)| synthase [glutamine-hydrolyzing]) Length = 680 Score = 29.3 bits (64), Expect = 5.8 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = -2 Query: 404 DILLCVIPGGISCKLCPRNTLEACRLYPCTFTDPSLKCVGCPVMCGSVGGPLGLPQLAWD 225 DIL +PG ++ N E CR TFT+ ++ +M +G P ++++D Sbjct: 393 DILAFTLPGFVTGDRTKSNATELCRALGVTFTEIDIRDT-ATLMLKKIGHPFSRGEVSYD 451
>AROK_ARCFU (O29730) Shikimate kinase (EC 2.7.1.71) (SK)| Length = 280 Score = 28.9 bits (63), Expect = 7.6 Identities = 12/44 (27%), Positives = 24/44 (54%) Frame = -2 Query: 275 MCGSVGGPLGLPQLAWDKKLCCCCPVTHGSVEPLGYGSTDTLEA 144 +C +G PL + + W+K + CC ++ + +GS + +EA Sbjct: 203 ICKMLGYPLEIAEKGWEKGI--CCGISGNGPSYVAFGSKNEMEA 244
>ENAM_MOUSE (O55196) Enamelin precursor| Length = 1274 Score = 28.9 bits (63), Expect = 7.6 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 1/111 (0%) Frame = +1 Query: 151 NVSVEPYPSGSTEPWVTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYN 330 N VE P ++ W Q + ++G+P P + + G+P HF N+ G N Sbjct: 352 NPQVERGPQWNSFAWEGKQATRP--GNPTYGKPPSPTSGVNYAGNPVHFGR---NLPGPN 406 Query: 331 LHASNVFLGHNLQEMPPGMTHSNISTAAF-QQNTGTNTAYMSYNDRPNDMF 480 F+G N P + + S F N +N ++ N N F Sbjct: 407 ----KPFVGANPASNKPFVGANPASNKPFVGANPASNKPFVGANPASNKPF 453
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.9 bits (63), Expect = 7.6 Identities = 14/49 (28%), Positives = 24/49 (48%) Frame = +2 Query: 326 IICMLLMCFSDTTYKKCHQE*HTVIYQLQLSSRTPEQIPHTCHIMIDQM 472 I+C L C ++ +C Q +++ L S R EQ H H ++Q+ Sbjct: 811 IVCPELPCQTELAVAQCTQRPVDIVFLLDGSERIGEQNFHRAHHFVEQV 859
>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2505 Score = 28.9 bits (63), Expect = 7.6 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 193 WVTGQQQQSFLSQASWGRPSGPPTE 267 WVT + Q+ F +W GPPT+ Sbjct: 2031 WVTQRAQEMFQKTGTWSPEQGPPTD 2055
>MIAM_SARMU (Q08668) Major microneme antigen precursor| Length = 241 Score = 28.9 bits (63), Expect = 7.6 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = -2 Query: 446 YAVFVPVFCWKAAVDILLCVI---PGGISCKLCPRNTLE 339 Y+ P FCW A CV+ GG+ CKL +N++E Sbjct: 202 YSGHAPAFCWAACKGTAGCVMYTFQGGV-CKLYSKNSVE 239
>GP157_RAT (Q5FVG1) Probable G-protein coupled receptor 157| Length = 330 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = -1 Query: 273 VWLGRRTTRPTPTCLGQKALLLLPCHPWLSRTTRVW 166 +W GR+ R +PT + K L+L+ P++ RVW Sbjct: 209 IWEGRQLQRGSPTSMADKKLILI---PFIFICLRVW 241
>FREA_MOUSE (Q61574) Forkhead-related transcription factor 10 (FREAC-10)| (Forkhead-like 18 protein) (Transcription factor FKH-3) Length = 329 Score = 28.5 bits (62), Expect = 9.9 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = +1 Query: 145 ASNVSVEPYPSGSTEPWVTGQQQQSFLSQASWGRPSGPP 261 AS+ + P P+ S EPWV G SF Q G P G P Sbjct: 282 ASHRAPLPLPADSKEPWVAG----SFPVQGGSGYPLGLP 316
>SPR1_SACBA (Q876J2) Sporulation-specific glucan 1,3-beta-glucosidase precursor| (EC 3.2.1.58) (Exo-1,3-beta-glucanase) Length = 445 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 127 QGYNFLASNVSVEPYPSGSTEPWVTGQQQQSFLSQASWGRPSG 255 QG+N + V + + S +P+VTG+Q+ W R G Sbjct: 126 QGFNMVRIPVGYWAFTTLSHDPYVTGEQEYFLDKAVDWARKYG 168
>LAMC1_HUMAN (P11047) Laminin gamma-1 chain precursor (Laminin B2 chain)| Length = 1609 Score = 28.5 bits (62), Expect = 9.9 Identities = 26/98 (26%), Positives = 36/98 (36%) Frame = -2 Query: 392 CVIPGGISCKLCPRNTLEACRLYPCTFTDPSLKCVGCPVMCGSVGGPLGLPQLAWDKKLC 213 C PGG SC + P+ C P T +C C G G PLG +LC Sbjct: 773 CPCPGGSSCAVVPKTKEVVCTNCPTGTT--GKRCELCD--DGYFGDPLGRNGPVRLCRLC 828 Query: 212 CCCPVTHGSVEPLGYGSTDTLEARKLYPCTFTDPSLKC 99 C +++P G+ + L L C + C Sbjct: 829 QC----SDNIDPNAVGNCNRLTGECL-KCIYNTAGFYC 861
>KPC1_NEUCR (P87253) Protein kinase C-like (EC 2.7.11.13)| Length = 1142 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/38 (36%), Positives = 22/38 (57%) Frame = +1 Query: 196 VTGQQQQSFLSQASWGRPSGPPTEPHMTGHPTHFNEGS 309 ++G +QS +G PS PP E + GH +H ++GS Sbjct: 80 MSGSHRQSVDDFEGYGAPSPPPKED-VRGHSSHQSQGS 116
>TSP2_HUMAN (P35442) Thrombospondin-2 precursor| Length = 1172 Score = 28.5 bits (62), Expect = 9.9 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 5/95 (5%) Frame = -2 Query: 368 CKLCPRNTLEACRLYPCTFTDPSLKCVGCPVMC-GSVGGPLGLPQLAWDKKLC----CCC 204 C L P ++ C T P C+ CP G+ +GL +K++C C Sbjct: 594 CALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCK 653 Query: 203 PVTHGSVEPLGYGSTDTLEARKLYPCTFTDPSLKC 99 TH + A +Y F+DP KC Sbjct: 654 DKTHNCHK----------HAECIYLGHFSDPMYKC 678
>HEMA_IAGU2 (P13103) Hemagglutinin precursor [Contains: Hemagglutinin HA1| chain; Hemagglutinin HA2 chain] Length = 566 Score = 28.5 bits (62), Expect = 9.9 Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 4/93 (4%) Frame = +1 Query: 181 STEPWVTGQQQ-QSFLSQASWGRPSGPPTEPHMTGHPTHFNEGSVNVQGYNLHASNVFLG 357 S E W+ G S W P PH +P G +N G H + Sbjct: 74 SFEGWIVGNPACTSNFGIREWSYLIEDPAAPHGLCYP-----GELNNNGELRHLFSGIRS 128 Query: 358 HNLQEMPPGMTHSNI---STAAFQQNTGTNTAY 447 + E+ P + + +T+A + NTGTN+ Y Sbjct: 129 FSRTELIPPTSWGEVLDGTTSACRDNTGTNSFY 161
>DYM_PONPY (Q5RAW5) Dymeclin| Length = 669 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 231 LGQKALLLLPCHPWLSRTTRVWLYRYIRSKKIIP--LHVY 118 + K L+ PC P+ S+ + LY +IR +K P HV+ Sbjct: 197 ISHKYLMRGPCLPYTSKLVKTLLYNFIRQEKPPPPGAHVF 236
>DYM_MOUSE (Q8CHY3) Dymeclin| Length = 669 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 231 LGQKALLLLPCHPWLSRTTRVWLYRYIRSKKIIP--LHVY 118 + K L+ PC P+ S+ + LY +IR +K P HV+ Sbjct: 197 ISHKYLMQGPCLPYTSKLVKTLLYNFIRQEKPPPPGTHVF 236
>DYM_HUMAN (Q7RTS9) Dymeclin (Dyggve-Melchior-Clausen syndrome protein)| Length = 669 Score = 28.5 bits (62), Expect = 9.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%) Frame = -1 Query: 231 LGQKALLLLPCHPWLSRTTRVWLYRYIRSKKIIP--LHVY 118 + K L+ PC P+ S+ + LY +IR +K P HV+ Sbjct: 197 ISHKYLMRGPCLPYTSKLVKTLLYNFIRQEKPPPPGAHVF 236 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.126 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,408,544 Number of Sequences: 219361 Number of extensions: 1717391 Number of successful extensions: 3772 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3604 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3768 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)