ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl05a10 |
|---|---|
| Clone Library Name | barley_pub |
>MMT1_HORVU (Q9MBC2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) (Hv-MMT1) Length = 1088 Score = 81.6 bits (200), Expect(2) = 3e-21 Identities = 37/38 (97%), Positives = 37/38 (97%) Frame = +3 Query: 237 LECFRTFHFRIHDVVLDPHLQGFQHRKKLTMMEIPSIF 350 LECFRTFHFRIHDVVLDPHLQGFQ RKKLTMMEIPSIF Sbjct: 62 LECFRTFHFRIHDVVLDPHLQGFQQRKKLTMMEIPSIF 99 Score = 37.7 bits (86), Expect(2) = 3e-21 Identities = 20/36 (55%), Positives = 20/36 (55%) Frame = +1 Query: 91 MAAAAGDVEAFLXXXXXXXXXXXXXXXXVLERLEAP 198 MAAAAGDVEAFL VLERLEAP Sbjct: 1 MAAAAGDVEAFLAACQASGDAAYGAAKAVLERLEAP 36
>MMT1_MAIZE (Q8W519) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1091 Score = 75.5 bits (184), Expect(2) = 2e-16 Identities = 33/37 (89%), Positives = 35/37 (94%) Frame = +3 Query: 240 ECFRTFHFRIHDVVLDPHLQGFQHRKKLTMMEIPSIF 350 +CFRTFHFRIHDVVLDPH+QGFQ KKLTMMEIPSIF Sbjct: 65 DCFRTFHFRIHDVVLDPHVQGFQQMKKLTMMEIPSIF 101 Score = 27.3 bits (59), Expect(2) = 2e-16 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 3/39 (7%) Frame = +1 Query: 91 MAAAAG---DVEAFLXXXXXXXXXXXXXXXXVLERLEAP 198 MAA AG DV+AFL VLERL AP Sbjct: 1 MAALAGEDKDVDAFLADCTASGDAAYGAAKAVLERLHAP 39
>MMT1_ARATH (Q9LTB2) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1071 Score = 46.6 bits (109), Expect = 2e-05 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +3 Query: 249 RTFHFRIHDVVLDPHLQGFQHRKKLTMMEIPSIF 350 +T+HF I D+ LD + +GFQ RKKLTMM IPSIF Sbjct: 60 QTYHFHIQDIYLDQY-EGFQSRKKLTMMVIPSIF 92
>MMT1_WOLBI (Q9SWR3) Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met| S-methyltransferase) Length = 1088 Score = 45.1 bits (105), Expect = 4e-05 Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Frame = +3 Query: 243 CFRTFHFRIHDVVLDPHL-QGFQHRKKLTMMEIPSIF 350 C T+HF+I D+ LD + G+Q+RKK TMM IPSIF Sbjct: 65 CLETYHFQIQDIYLDRNEGTGYQNRKKFTMMVIPSIF 101
>SYT3_RAT (P40748) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 588 Score = 32.0 bits (71), Expect = 0.39 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 +LG+S+ VS+ LCW PWR Sbjct: 68 LLGVSLFVSWKLCWVPWR 85
>SYT3_HUMAN (Q9BQG1) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 590 Score = 32.0 bits (71), Expect = 0.39 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 +LG+S+ VS+ LCW PWR Sbjct: 67 LLGVSLFVSWKLCWVPWR 84
>SYT3_MOUSE (O35681) Synaptotagmin-3 (Synaptotagmin III) (SytIII)| Length = 587 Score = 32.0 bits (71), Expect = 0.39 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 +LG+S+ VS+ LCW PWR Sbjct: 68 LLGVSLFVSWKLCWVPWR 85
>SY63_DISOM (P24507) Synaptotagmin C (Synaptic vesicle protein O-p65-C)| Length = 537 Score = 32.0 bits (71), Expect = 0.39 Identities = 11/18 (61%), Positives = 15/18 (83%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 +LG+S+ VS+ LCW PWR Sbjct: 69 LLGVSLFVSWKLCWIPWR 86
>SYT9_RAT (Q925C0) Synaptotagmin-9 (Synaptotagmin IX) (SytIX) (Synaptotagmin| V) (Synaptotagmin 5) Length = 491 Score = 30.4 bits (67), Expect = 1.1 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 + G+S+ VS+ LCW PWR Sbjct: 66 LFGVSLFVSWKLCWVPWR 83
>SYT9_MOUSE (Q9R0N9) Synaptotagmin-9 (Synaptotagmin IX) (SytIX) (Synaptotagmin| V) Length = 491 Score = 30.4 bits (67), Expect = 1.1 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 + G+S+ VS+ LCW PWR Sbjct: 66 LFGVSLFVSWKLCWVPWR 83
>SYT9_HUMAN (Q86SS6) Synaptotagmin-9 (Synaptotagmin IX) (SytIX)| Length = 491 Score = 30.4 bits (67), Expect = 1.1 Identities = 10/18 (55%), Positives = 14/18 (77%) Frame = -2 Query: 346 MLGISIIVSFFLCWNPWR 293 + G+S+ VS+ LCW PWR Sbjct: 66 LFGVSLFVSWKLCWVPWR 83
>C5ARL_HUMAN (Q9P296) C5a anaphylatoxin chemotactic receptor C5L2 (G-protein| coupled receptor 77) Length = 337 Score = 28.1 bits (61), Expect = 5.6 Identities = 9/16 (56%), Positives = 13/16 (81%) Frame = -2 Query: 343 LGISIIVSFFLCWNPW 296 LG +I+V FF+CW P+ Sbjct: 234 LGTAIVVGFFVCWAPY 249
>PLCB3_MOUSE (P51432) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-3) (PLC-beta-3) Length = 1234 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 237 LECFRTFHFRIHDVVLDPHLQGFQHRKKLTMME 335 LE R H R+ +VVLD H F+ K+L E Sbjct: 1058 LEHLRQAHQRLKEVVLDTHTTQFKRLKELNERE 1090
>CML1_RAT (O35786) Chemokine receptor-like 1 (G-protein coupled receptor DEZ)| (G-protein coupled chemoattractant-like receptor) Length = 371 Score = 27.3 bits (59), Expect = 9.5 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = -2 Query: 337 ISIIVSFFLCWNPW 296 I+II++FFLCW P+ Sbjct: 261 ITIIITFFLCWCPY 274
>CML1_MOUSE (P97468) Chemokine receptor-like 1 (G-protein coupled receptor DEZ)| Length = 371 Score = 27.3 bits (59), Expect = 9.5 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = -2 Query: 337 ISIIVSFFLCWNPW 296 I+II++FFLCW P+ Sbjct: 261 ITIIITFFLCWCPY 274 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,967,353 Number of Sequences: 219361 Number of extensions: 308830 Number of successful extensions: 1768 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 1700 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1766 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
