ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl05a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome... 436 e-119
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 436 e-119
3dbj|AK108773.1| Oryza sativa (japonica cultivar-group) cDNA clon... 436 e-119
4dbj|AK100354.1| Oryza sativa (japonica cultivar-group) cDNA clon... 123 6e-25
5gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 44 0.42
6gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complet... 44 0.42
7gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosom... 44 0.42
8gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome ... 42 1.7
9gb|AC133876.8| Mus musculus chromosome 5, clone RP23-190E15, com... 42 1.7
10gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome... 42 1.7
11emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in ... 42 1.7
12emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chro... 42 1.7
13ref|XM_624787.1| PREDICTED: Apis mellifera similar to salvador h... 42 1.7
14emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chro... 42 1.7
15gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome... 40 6.6
16gb|AC125135.5| Mus musculus BAC clone RP24-321M1 from chromosome... 40 6.6
17gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, com... 40 6.6
18gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, co... 40 6.6
19gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, com... 40 6.6
20gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome... 40 6.6
21gb|AC174234.4| Mus musculus BAC clone RP24-50H9 from chromosome ... 40 6.6
22gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Canc... 40 6.6
23gb|DQ015703.1| Homo sapiens mitogen-activated protein kinase kin... 40 6.6
24gb|AC005410.3| Homo sapiens chromosome 17, clone RP11-1096G20, c... 40 6.6
25gb|AY108278.1| Zea mays PCO119899 mRNA sequence 40 6.6
26emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chro... 40 6.6
27gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Canc... 40 6.6 
>gb|AC108500.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1280_A04,
             complete sequence
          Length = 88553

 Score =  436 bits (220), Expect = e-119
 Identities = 406/468 (86%)
 Strand = Plus / Plus

                                                                         
Query: 20    ccttcctcctcttgaaaaagaaggctttagagtttctgatcttgtctggggtaaagtaaa 79
             ||||||||||||||| |||| ||  ||| |||||||||| ||||||||||||||||||||
Sbjct: 32628 ccttcctcctcttgataaaggagaatttcgagtttctgaccttgtctggggtaaagtaaa 32687

                                                                         
Query: 80    aagccacccttggtggcctggtgagatctttgatccttcaaatgcatctgagttggcatt 139
             |||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||
Sbjct: 32688 aagccatccttggtggcctggtgagatttttgacccttcagatgcgtctgagttggcatt 32747

                                                                         
Query: 140   gaagcaccagaaaaagggcggtcgtttggttgcatattttggtgacaacagttttgcatg 199
             |||||||||||| |||||| | | |||| | |||||||| |||||||| | |||||||||
Sbjct: 32748 gaagcaccagaagaagggcagccatttgatagcatatttcggtgacaatacttttgcatg 32807

                                                                         
Query: 200   gtgcgacgattcccagttgaagccttttgtaacagactattcacagatggagaaacagag 259
             |||||| || ||||| ||||||||||||||| || | |||||||| ||||||||||||||
Sbjct: 32808 gtgcgatgaatcccaattgaagccttttgtatcaaattattcacaaatggagaaacagag 32867

                                                                         
Query: 260   tagtgcggattcctttgtcggttctgtcaattatgcacttgaagaactttcaaggcggat 319
              ||| | ||| |||||||  |||| || || ||||| ||||||||||| |||||||||||
Sbjct: 32868 cagttcagatgcctttgttagttcagttaactatgcccttgaagaactctcaaggcggat 32927

                                                                         
Query: 320   actgtcggggatgagctgttcttgcctgccagaagagctctctgacaatggaatgtcata 379
             | |||| |||||||||||||||||  | || |||||||| ||||||||||| ||||| ||
Sbjct: 32928 attgtcagggatgagctgttcttgtttaccggaagagctatctgacaatgggatgtccta 32987

                                                                         
Query: 380   tatggttgagaatgctgggctcaaggatggagttacatgctcagcagtcaaccggtctga 439
             |||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 32988 tatggtcgagaatgctgggctcaaggatggagttacttgctctgcagttaaccggtctga 33047

                                                             
Query: 440   gatcctggcatcttttagtccagaaagccttcttcagtatgttaagtc 487
             |||  || ||| ||  || |||||||  |||||| | |||||||||||
Sbjct: 33048 gattttgtcatgttgcagcccagaaaatcttcttaattatgttaagtc 33095



 Score =  123 bits (62), Expect = 6e-25
 Identities = 148/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                         
Query: 54    tctgatcttgtctggggtaaagtaaaaagccacccttggtggcctggtgagatctttgat 113
             |||| |||||| ||| ||||| | ||| | || |||||||||||||||||||| ||||||
Sbjct: 27373 tctggtcttgtgtggagtaaattgaaaggtcatccttggtggcctggtgagatatttgat 27432

                                                                         
Query: 114   ccttcaaatgcatctgagttggcattgaagcacc---agaaaaagggcggtcgtttggtt 170
              ||||| ||||||||||||||||| |||| ||||   |||| |||||| ||| |||||| 
Sbjct: 27433 acttcagatgcatctgagttggcactgaaacaccagaagaagaagggcagtcatttggta 27492

                                                                     
Query: 171   gcatattttggtgacaacagttttgcatggtgcgacgattcccagttgaagccttt 226
             |||||||| |||  ||| | |||||||||||| || || |||||||||||||||||
Sbjct: 27493 gcatatttcggtagcaatacttttgcatggtgtgatgaatcccagttgaagccttt 27548



 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                         
Query: 297   cttgaagaactttcaaggcggatactgtcggggatgagctgttcttgcctgccagaagag 356
             ||||||||| | |||||||||||| |||| |||||| | || | ||| || |||||||| 
Sbjct: 27619 cttgaagaaatctcaaggcggatattgtcagggatgtgttgcttttgtcttccagaagat 27678

                                                                         
Query: 357   ctctctgacaatggaatgtcatatatggttgagaatgctgggctcaaggatggagttaca 416
             |||||||||||| | ||||| || |||||||||||| ||||||||| |||||||||||| 
Sbjct: 27679 ctctctgacaattgcatgtcttacatggttgagaattctgggctcagggatggagttact 27738

                  
Query: 417   tgctc 421
             |||||
Sbjct: 27739 tgctc 27743
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  436 bits (220), Expect = e-119
 Identities = 406/468 (86%)
 Strand = Plus / Plus

                                                                            
Query: 20       ccttcctcctcttgaaaaagaaggctttagagtttctgatcttgtctggggtaaagtaaa 79
                ||||||||||||||| |||| ||  ||| |||||||||| ||||||||||||||||||||
Sbjct: 22620090 ccttcctcctcttgataaaggagaatttcgagtttctgaccttgtctggggtaaagtaaa 22620149

                                                                            
Query: 80       aagccacccttggtggcctggtgagatctttgatccttcaaatgcatctgagttggcatt 139
                |||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||
Sbjct: 22620150 aagccatccttggtggcctggtgagatttttgacccttcagatgcgtctgagttggcatt 22620209

                                                                            
Query: 140      gaagcaccagaaaaagggcggtcgtttggttgcatattttggtgacaacagttttgcatg 199
                |||||||||||| |||||| | | |||| | |||||||| |||||||| | |||||||||
Sbjct: 22620210 gaagcaccagaagaagggcagccatttgatagcatatttcggtgacaatacttttgcatg 22620269

                                                                            
Query: 200      gtgcgacgattcccagttgaagccttttgtaacagactattcacagatggagaaacagag 259
                |||||| || ||||| ||||||||||||||| || | |||||||| ||||||||||||||
Sbjct: 22620270 gtgcgatgaatcccaattgaagccttttgtatcaaattattcacaaatggagaaacagag 22620329

                                                                            
Query: 260      tagtgcggattcctttgtcggttctgtcaattatgcacttgaagaactttcaaggcggat 319
                 ||| | ||| |||||||  |||| || || ||||| ||||||||||| |||||||||||
Sbjct: 22620330 cagttcagatgcctttgttagttcagttaactatgcccttgaagaactctcaaggcggat 22620389

                                                                            
Query: 320      actgtcggggatgagctgttcttgcctgccagaagagctctctgacaatggaatgtcata 379
                | |||| |||||||||||||||||  | || |||||||| ||||||||||| ||||| ||
Sbjct: 22620390 attgtcagggatgagctgttcttgtttaccggaagagctatctgacaatgggatgtccta 22620449

                                                                            
Query: 380      tatggttgagaatgctgggctcaaggatggagttacatgctcagcagtcaaccggtctga 439
                |||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 22620450 tatggtcgagaatgctgggctcaaggatggagttacttgctctgcagttaaccggtctga 22620509

                                                                
Query: 440      gatcctggcatcttttagtccagaaagccttcttcagtatgttaagtc 487
                |||  || ||| ||  || |||||||  |||||| | |||||||||||
Sbjct: 22620510 gattttgtcatgttgcagcccagaaaatcttcttaattatgttaagtc 22620557



 Score =  123 bits (62), Expect = 6e-25
 Identities = 148/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                            
Query: 54       tctgatcttgtctggggtaaagtaaaaagccacccttggtggcctggtgagatctttgat 113
                |||| |||||| ||| ||||| | ||| | || |||||||||||||||||||| ||||||
Sbjct: 22614835 tctggtcttgtgtggagtaaattgaaaggtcatccttggtggcctggtgagatatttgat 22614894

                                                                            
Query: 114      ccttcaaatgcatctgagttggcattgaagcacc---agaaaaagggcggtcgtttggtt 170
                 ||||| ||||||||||||||||| |||| ||||   |||| |||||| ||| |||||| 
Sbjct: 22614895 acttcagatgcatctgagttggcactgaaacaccagaagaagaagggcagtcatttggta 22614954

                                                                        
Query: 171      gcatattttggtgacaacagttttgcatggtgcgacgattcccagttgaagccttt 226
                |||||||| |||  ||| | |||||||||||| || || |||||||||||||||||
Sbjct: 22614955 gcatatttcggtagcaatacttttgcatggtgtgatgaatcccagttgaagccttt 22615010



 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                            
Query: 297      cttgaagaactttcaaggcggatactgtcggggatgagctgttcttgcctgccagaagag 356
                ||||||||| | |||||||||||| |||| |||||| | || | ||| || |||||||| 
Sbjct: 22615081 cttgaagaaatctcaaggcggatattgtcagggatgtgttgcttttgtcttccagaagat 22615140

                                                                            
Query: 357      ctctctgacaatggaatgtcatatatggttgagaatgctgggctcaaggatggagttaca 416
                |||||||||||| | ||||| || |||||||||||| ||||||||| |||||||||||| 
Sbjct: 22615141 ctctctgacaattgcatgtcttacatggttgagaattctgggctcagggatggagttact 22615200

                     
Query: 417      tgctc 421
                |||||
Sbjct: 22615201 tgctc 22615205
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>dbj|AK108773.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H09, full
            insert sequence
          Length = 1480

 Score =  436 bits (220), Expect = e-119
 Identities = 406/468 (86%)
 Strand = Plus / Plus

                                                                        
Query: 20   ccttcctcctcttgaaaaagaaggctttagagtttctgatcttgtctggggtaaagtaaa 79
            ||||||||||||||| |||| ||  ||| |||||||||| ||||||||||||||||||||
Sbjct: 637  ccttcctcctcttgataaaggagaatttcgagtttctgaccttgtctggggtaaagtaaa 696

                                                                        
Query: 80   aagccacccttggtggcctggtgagatctttgatccttcaaatgcatctgagttggcatt 139
            |||||| |||||||||||||||||||| ||||| |||||| |||| ||||||||||||||
Sbjct: 697  aagccatccttggtggcctggtgagatttttgacccttcagatgcgtctgagttggcatt 756

                                                                        
Query: 140  gaagcaccagaaaaagggcggtcgtttggttgcatattttggtgacaacagttttgcatg 199
            |||||||||||| |||||| | | |||| | |||||||| |||||||| | |||||||||
Sbjct: 757  gaagcaccagaagaagggcagccatttgatagcatatttcggtgacaatacttttgcatg 816

                                                                        
Query: 200  gtgcgacgattcccagttgaagccttttgtaacagactattcacagatggagaaacagag 259
            |||||| || ||||| ||||||||||||||| || | |||||||| ||||||||||||||
Sbjct: 817  gtgcgatgaatcccaattgaagccttttgtatcaaattattcacaaatggagaaacagag 876

                                                                        
Query: 260  tagtgcggattcctttgtcggttctgtcaattatgcacttgaagaactttcaaggcggat 319
             ||| | ||| |||||||  |||| || || ||||| ||||||||||| |||||||||||
Sbjct: 877  cagttcagatgcctttgttagttcagttaactatgcccttgaagaactctcaaggcggat 936

                                                                        
Query: 320  actgtcggggatgagctgttcttgcctgccagaagagctctctgacaatggaatgtcata 379
            | |||| |||||||||||||||||  | || |||||||| ||||||||||| ||||| ||
Sbjct: 937  attgtcagggatgagctgttcttgtttaccggaagagctatctgacaatgggatgtccta 996

                                                                        
Query: 380  tatggttgagaatgctgggctcaaggatggagttacatgctcagcagtcaaccggtctga 439
            |||||| ||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct: 997  tatggtcgagaatgctgggctcaaggatggagttacttgctctgcagttaaccggtctga 1056

                                                            
Query: 440  gatcctggcatcttttagtccagaaagccttcttcagtatgttaagtc 487
            |||  || ||| ||  || |||||||  |||||| | |||||||||||
Sbjct: 1057 gattttgtcatgttgcagcccagaaaatcttcttaattatgttaagtc 1104
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>dbj|AK100354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083G23, full
           insert sequence
          Length = 2630

 Score =  123 bits (62), Expect = 6e-25
 Identities = 148/176 (84%), Gaps = 3/176 (1%)
 Strand = Plus / Plus

                                                                       
Query: 54  tctgatcttgtctggggtaaagtaaaaagccacccttggtggcctggtgagatctttgat 113
           |||| |||||| ||| ||||| | ||| | || |||||||||||||||||||| ||||||
Sbjct: 808 tctggtcttgtgtggagtaaattgaaaggtcatccttggtggcctggtgagatatttgat 867

                                                                       
Query: 114 ccttcaaatgcatctgagttggcattgaagcacc---agaaaaagggcggtcgtttggtt 170
            ||||| ||||||||||||||||| |||| ||||   |||| |||||| ||| |||||| 
Sbjct: 868 acttcagatgcatctgagttggcactgaaacaccagaagaagaagggcagtcatttggta 927

                                                                   
Query: 171 gcatattttggtgacaacagttttgcatggtgcgacgattcccagttgaagccttt 226
           |||||||| |||  ||| | |||||||||||| || || |||||||||||||||||
Sbjct: 928 gcatatttcggtagcaatacttttgcatggtgtgatgaatcccagttgaagccttt 983



 Score =  105 bits (53), Expect = 1e-19
 Identities = 107/125 (85%)
 Strand = Plus / Plus

                                                                        
Query: 297  cttgaagaactttcaaggcggatactgtcggggatgagctgttcttgcctgccagaagag 356
            ||||||||| | |||||||||||| |||| |||||| | || | ||| || |||||||| 
Sbjct: 1054 cttgaagaaatctcaaggcggatattgtcagggatgtgttgcttttgtcttccagaagat 1113

                                                                        
Query: 357  ctctctgacaatggaatgtcatatatggttgagaatgctgggctcaaggatggagttaca 416
            |||||||||||| | ||||| || |||||||||||| ||||||||| |||||||||||| 
Sbjct: 1114 ctctctgacaattgcatgtcttacatggttgagaattctgggctcagggatggagttact 1173

                 
Query: 417  tgctc 421
            |||||
Sbjct: 1174 tgctc 1178
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 28     ctcttgaaaaagaaggctttagagtt 53
              ||||||||||||||||||||| ||||
Sbjct: 200714 ctcttgaaaaagaaggctttaaagtt 200689
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>gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complete sequence
          Length = 204175

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 236   ctattcacagatggagaaacag 257
             ||||||||||||||||||||||
Sbjct: 14574 ctattcacagatggagaaacag 14553
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>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence
          Length = 206081

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 236    ctattcacagatggagaaacag 257
              ||||||||||||||||||||||
Sbjct: 144401 ctattcacagatggagaaacag 144380
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>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence
          Length = 218138

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 18     tcccttcctcctcttgaaaaagaag 42
              |||||||||||||||| ||||||||
Sbjct: 138566 tcccttcctcctcttggaaaagaag 138590
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>gb|AC133876.8| Mus musculus chromosome 5, clone RP23-190E15, complete sequence
          Length = 187088

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 10     ccagatactcccttcctcctc 30
              |||||||||||||||||||||
Sbjct: 109343 ccagatactcccttcctcctc 109323
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>gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome 6, complete sequence
          Length = 185160

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 18    tcccttcctcctcttgaaaaagaag 42
             |||||||||||||||| ||||||||
Sbjct: 45537 tcccttcctcctcttggaaaagaag 45561
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>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7, complete
              sequence
          Length = 145338

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 101    tgagatctttgatccttcaaa 121
              |||||||||||||||||||||
Sbjct: 131285 tgagatctttgatccttcaaa 131305
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>emb|AL596111.7| Mouse DNA sequence from clone RP23-188E9 on chromosome 11, complete
             sequence
          Length = 199961

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 350   agaagagctctctgacaatgg 370
             |||||||||||||||||||||
Sbjct: 22673 agaagagctctctgacaatgg 22693
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>ref|XM_624787.1| PREDICTED: Apis mellifera similar to salvador homolog 1
           (LOC552413), mRNA
          Length = 1551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 26  tcctcttgaaaaagaaggctt 46
           |||||||||||||||||||||
Sbjct: 961 tcctcttgaaaaagaaggctt 981
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>emb|CR956397.19| Pig DNA sequence from clone CH242-259E5 on chromosome 17, complete
             sequence
          Length = 177531

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 239   ttcacagatggagaaacagag 259
             |||||||||||||||||||||
Sbjct: 35559 ttcacagatggagaaacagag 35579
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>gb|AC122460.4| Mus musculus BAC clone RP24-283I1 from chromosome 19, complete sequence
          Length = 173119

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    aaaaagccacccttggtggc 96
             ||||||||||||||||||||
Sbjct: 78982 aaaaagccacccttggtggc 78963
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>gb|AC125135.5| Mus musculus BAC clone RP24-321M1 from chromosome 17, complete sequence
          Length = 182503

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     agatactcccttcctcctct 31
              ||||||||||||||||||||
Sbjct: 121219 agatactcccttcctcctct 121238
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>gb|AC091047.10| Homo sapiens chromosome 8, clone RP11-102F4, complete sequence
          Length = 165127

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   gtagtgcggattcctttgtc 278
             ||||||||||||||||||||
Sbjct: 82307 gtagtgcggattcctttgtc 82326
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>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence
          Length = 160748

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 367   atggaatgtcatatatggttgagaatgc 394
             ||||||||||| || |||||||||||||
Sbjct: 91241 atggaatgtcaaatgtggttgagaatgc 91268
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>gb|AC067859.7| Homo sapiens chromosome 18, clone RP11-569D6, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 367  atggaatgtcatatatggttgagaatgc 394
            ||||||||||| || |||||||||||||
Sbjct: 6077 atggaatgtcaaatgtggttgagaatgc 6104
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>gb|AC175666.3| Mus musculus BAC clone RP24-350M1 from chromosome y, complete sequence
          Length = 196535

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaaagaaggctttagagttt 54
             ||||||||||||||||||||
Sbjct: 30603 aaaagaaggctttagagttt 30622
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>gb|AC174234.4| Mus musculus BAC clone RP24-50H9 from chromosome y, complete sequence
          Length = 200919

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aaaagaaggctttagagttt 54
              ||||||||||||||||||||
Sbjct: 141562 aaaagaaggctttagagttt 141581
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>gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214923

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   ttcacagatggagaaacaga 258
             ||||||||||||||||||||
Sbjct: 23928 ttcacagatggagaaacaga 23909
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>gb|DQ015703.1| Homo sapiens mitogen-activated protein kinase kinase 4 (MAP2K4) gene,
             complete cds
          Length = 125331

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 296   acttgaagaactttcaaggc 315
             ||||||||||||||||||||
Sbjct: 63751 acttgaagaactttcaaggc 63770
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>gb|AC005410.3| Homo sapiens chromosome 17, clone RP11-1096G20, complete sequence
          Length = 141497

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    acttgaagaactttcaaggc 315
              ||||||||||||||||||||
Sbjct: 128855 acttgaagaactttcaaggc 128874
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>gb|AY108278.1| Zea mays PCO119899 mRNA sequence
          Length = 1540

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  ctgccagaagagctctctga 364
            ||||||||||||||||||||
Sbjct: 1034 ctgccagaagagctctctga 1015
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>emb|AL772282.9| Mouse DNA sequence from clone RP23-328F3 on chromosome 2, complete
             sequence
          Length = 188624

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   tcccagttgaagccttttgt 229
             ||||||||||||||||||||
Sbjct: 35334 tcccagttgaagccttttgt 35315
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>gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187031

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ttcacagatggagaaacaga 258
             ||||||||||||||||||||
Sbjct: 64598 ttcacagatggagaaacaga 64617


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,989,394
Number of Sequences: 3902068
Number of extensions: 4989394
Number of successful extensions: 94924
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94837
Number of HSP's gapped (non-prelim): 84
length of query: 489
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 467
effective length of database: 17,147,199,772
effective search space: 8007742293524
effective search space used: 8007742293524
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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