>YPC2_ECOLI (P18128) Hypothetical 26.4 kDa protein (ORF 245)|
          Length = 245

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 21/51 (41%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
 Frame = +1

Query: 223 PGAGPVPRSISRA-----TGFRPPCAAGVCARRQPSLP-----WTPVHAAG 345
           PGAG V  S   A      G RPPC A V     P+LP     W   H AG
Sbjct: 57  PGAGAVWESAHLAGRRCRVGIRPPCRAPVLCGNPPTLPGAGAVWESAHLAG 107



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 10/51 (19%)
 Frame = +1

Query: 223 PGAGPVPRSISRA-----TGFRPPCAAGVCARRQPSLP-----WTPVHAAG 345
           PGAG V +S   A        RPPC A V     P+LP     W   H AG
Sbjct: 20  PGAGAVWKSAHLAGRRCCVEIRPPCRAPVPCGNPPTLPGAGAVWESAHLAG 70

>DMWD_MOUSE (Q08274) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein)
          Length = 650

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
 Frame = +1

Query: 202 ARSTSRA--PGAGPVPRSISRATGFRPPC----AAGVCARRQPSLPWT 327
           A  +SRA   GAGP+PRS+SR+     P     A G  A  +P +P++
Sbjct: 449 ASGSSRAGETGAGPLPRSLSRSNSLPHPAGGGKAGGPNASMEPGIPFS 496

>CR1FB_BACTM (O66377) Pesticidal crystal protein cry1Fb (Insecticidal|
           delta-endotoxin CryIF(b)) (Crystaline entomocidal
           protoxin) (132 kDa crystal protein)
          Length = 1169

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 324 DPRPRSRALGDPLLL-GPFGAPHLLVGV 404
           DPRP  R L DP+ + G FG PH ++G+
Sbjct: 351 DPRPFYRTLSDPVFVRGGFGNPHYVLGL 378

>CR1FA_BACTA (Q03746) Pesticidal crystal protein cry1Fa (Insecticidal|
           delta-endotoxin CryIF(a)) (Crystaline entomocidal
           protoxin) (134 kDa crystal protein)
          Length = 1174

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +3

Query: 324 DPRPRSRALGDPLLL-GPFGAPHLLVGV 404
           DPRP  R L DP+ + G FG PH ++G+
Sbjct: 351 DPRPFYRTLSDPVFVRGGFGNPHYVLGL 378

>ATS19_MOUSE (P59509) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 19)
           (ADAM-TS 19) (ADAM-TS19)
          Length = 1210

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 17/40 (42%), Positives = 19/40 (47%)
 Frame = +1

Query: 280 CAAGVCARRQPSLPWTPVHAAGLWATPCSSDRSAPPTCSS 399
           C AG C RR P+    P H AG W+   S  RS     SS
Sbjct: 623 CKAGECTRRTPA----PEHLAGEWSPWSSCSRSCSSGVSS 658

>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein|
           (Dystrophia myotonica-containing WD repeat motif
           protein) (DMR-N9 protein) (Protein 59) (Fragment)
          Length = 553

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 202 ARSTSRA--PGAGPVPRSISRATGFRPPCAAG 291
           A S+SR   PG GP+PRS+SR+     P   G
Sbjct: 351 AASSSRGGEPGPGPLPRSLSRSNSLPHPAGGG 382

>PI5PA_MOUSE (P59644) Phosphatidylinositol 4,5-bisphosphate 5-phosphatase A (EC|
           3.1.3.56)
          Length = 1003

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
 Frame = +1

Query: 196 SLARSTSRAPGAGP---------VPRSISRATGFRPPCAAGVCARRQPSLPWTPVHAAGL 348
           S +RS SR+P   P         +P+ +++A G      +G C    P+L      AA  
Sbjct: 348 SPSRSPSRSPNRSPCLPPAPEVALPKPVTQAAG------SGRCP--SPNLQAQESPAAAT 399

Query: 349 WATPCSSDRSAPPTCSSEFYFR 414
             T  +S  SA PTC S+  FR
Sbjct: 400 TTTSPTSSWSAQPTCKSDPGFR 421

>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
 Frame = +1

Query: 217 RAPGAGPVPRSISR------ATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCSSD 372
           + P   P PRS++R      A    PP +     RR P LP  P  A    A  CS +
Sbjct: 358 QTPAVQPAPRSLARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQARACSPE 415

>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
 Frame = +1

Query: 217 RAPGAGPVPRSISR------ATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCSSD 372
           + P   P PRS++R      A    PP +     RR P LP  P  A    A  CS +
Sbjct: 358 QTPAVQPAPRSLARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQARACSPE 415

>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit|
            (Voltage-gated calcium channel alpha subunit Cav3.1)
          Length = 2254

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 8/46 (17%)
 Frame = +1

Query: 196  SLARSTSRAPGAGPV----PRSIS----RATGFRPPCAAGVCARRQ 309
            SL       PG+ P     P SIS     + G RPPC+ GVC RR+
Sbjct: 2166 SLGGQPLGGPGSRPKKKLSPPSISIDPPESQGSRPPCSPGVCLRRR 2211

>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent|
           helicase IGHMBP2) (Immunoglobulin mu-binding protein 2)
           (SMUBP-2) (Glial factor 1) (GF-1)
          Length = 993

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 401 SDEQVGGAERSEEQGVAQSPAAWTGVQGREGWRRAHTPAAQGGRKPVAREM 249
           S E   G+  +  +    + +  TG Q +EG + A  PA QG +KP  + +
Sbjct: 652 SHENSQGSSHAATKPQGPATSTRTGSQRQEGGQEAAAPARQGRKKPAGKSL 702

>SYE_METKA (Q8TXB7) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 571

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +2

Query: 20  GERLVSLHPRNPIARSLLSG 79
           GER++ LHP N +AR+LL G
Sbjct: 439 GERVLILHPENGVARALLDG 458

>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1211

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 338 AWTGVQGREGWRRAHTPAAQGGRKPVAREMDRGTGPAP 225
           AW   Q  E  R+    AA GG + +  E+DR +G +P
Sbjct: 178 AWKQKQAAERERKQREAAAAGGARSILEEIDRKSGLSP 215

>TXND3_ANTCR (P90666) Thioredoxin domain-containing protein 3 homolog|
           (Intermediate chain 1)
          Length = 837

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 18/63 (28%)
 Frame = -2

Query: 386 GGAERSE------EQGVAQSPAAWTGVQGREGW------------RRAHTPAAQGGRKPV 261
           GG E++E      E+  A+ PAA +G Q  EG             ++A  P A+GG KP 
Sbjct: 654 GGEEQTEQPAGEGEEQQAEQPAAESGEQQAEGGEPATETATEGGEQQAEQPPAEGGEKPA 713

Query: 260 ARE 252
             E
Sbjct: 714 EEE 716

>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1186

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 338 AWTGVQGREGWRRAHTPAAQGGRKPVAREMDRGTGPAP 225
           AW   Q  E  R+    AA GG + +  E+DR +G +P
Sbjct: 183 AWKQKQAAEKERKQREAAAAGGTRSILDEIDRKSGLSP 220

>HOX3_XENLA (P50476) Homeobox protein XHOX-3|
          Length = 388

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = +1

Query: 193 LSLARSTSRAPGAGPV-PRSISRATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCS 366
           +S   + +  P + P+ P    R      P    +CA R PS+  +P H  G   +PCS
Sbjct: 272 ISAGSTAAATPFSAPLRPLDTFRVLSHPYPRPDLLCAFRHPSIYASPAHGLGSGGSPCS 330

>Y11K_STRFR (P26800) Hypothetical 11.4 kDa protein (ORF1)|
          Length = 99

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 23/67 (34%), Positives = 26/67 (38%)
 Frame = +1

Query: 193 LSLARSTSRAPGAGPVPRSISRATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCSSD 372
           +   R T  A   G   R   RAT         V AR  PS  W PV +     TP    
Sbjct: 1   MKATRRTRVASERGVRRRRRVRATRKAGELPVKVWARTLPSAAWDPVGSVRTQVTP---S 57

Query: 373 RSAPPTC 393
           R+AP TC
Sbjct: 58  RAAPRTC 64

>PLDP2_ARATH (Q9M9W8) Phospholipase D p2 (EC 3.1.4.4) (AtPLDp2) (Phospholipase|
           D2 PHOX and PX containing domain) (Phospholipase D zeta
           2) (PLDzeta2)
          Length = 1046

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +1

Query: 301 RRQPSLPWTPVHAAGLWATPC 363
           R+ P +PW  VH A LW  PC
Sbjct: 542 RKYPRMPWHDVHCA-LWGPPC 561

>US25_HCMVA (P17145) Hypothetical protein US25|
          Length = 179

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 14/58 (24%), Positives = 24/58 (41%)
 Frame = +1

Query: 235 PVPRSISRATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCSSDRSAPPTCSSEFY 408
           P P+   + + F P  A  +C   +  L + PV      + P S  +  PP  + E +
Sbjct: 27  PAPKRRGKCSDFSPSFATLICLGLRTDLAFGPVRRNSRRSEPLSGSQPRPPIVTGETF 84

>HUNB_DROYA (O62541) Protein hunchback|
          Length = 759

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
 Frame = +1

Query: 205 RSTSRAPGAGPVPRSISRATGFRPPCAAGVCARRQPSLPWTPVHA---AGLWATPCSSDR 375
           R   ++   GP+    S  +G R P  A V  ++Q S P  P  +   A L   P     
Sbjct: 374 RRGPKSKNGGPIASGGS-GSGSRKPNVAAVAPQQQQSQPAQPATSQLSAALQGFPLVQSN 432

Query: 376 SAPPTCS 396
           SAPP  S
Sbjct: 433 SAPPAAS 439

>PLDP1_ARATH (Q9LRZ5) Phospholipase D p1 (EC 3.1.4.4) (AtPLDp1) (Phospholipase|
           D1 PHOX and PX containing domain) (Phospholipase D zeta
           1) (PLDzeta1)
          Length = 1096

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 301 RRQPSLPWTPVHAAGLWATPC 363
           ++ P +PW  VH A LW  PC
Sbjct: 547 KKHPRMPWHDVHCA-LWGPPC 566

>JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 696

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/31 (48%), Positives = 18/31 (58%)
 Frame = -2

Query: 347 SPAAWTGVQGREGWRRAHTPAAQGGRKPVAR 255
           SP +W G  G EG R A TP+   GR+  AR
Sbjct: 501 SPGSWNGEPGGEGSRPA-TPSDGAGRRSPAR 530

>MSA2_PLAFC (Q99317) Merozoite surface antigen 2 precursor (MSA-2) (Allelic|
           form 1)
          Length = 262

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 23/65 (35%), Positives = 26/65 (40%)
 Frame = +1

Query: 208 STSRAPGAGPVPRSISRATGFRPPCAAGVCARRQPSLPWTPVHAAGLWATPCSSDRSAPP 387
           S S   GAG      S   G  P    G  A R PS P TP   A    T  ++D  A  
Sbjct: 55  SGSAGSGAGA-----SAGNGANP----GADAERSPSTPATPATPATTTTTTTTNDAEAST 105

Query: 388 TCSSE 402
           + SSE
Sbjct: 106 STSSE 110


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,393,481
Number of Sequences: 219361
Number of extensions: 592641
Number of successful extensions: 2685
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)