ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl05a03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 331 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggtggggagttcg 390 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||||||||| ||| Sbjct: 19939950 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 19939891 Query: 391 ctcc 394 |||| Sbjct: 19939890 ctcc 19939887 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gcggccccgcggaggagcggc 242 ||||||||||||||||||||| Sbjct: 32103912 gcggccccgcggaggagcggc 32103932 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgacgacgcgtggggccgcg 98 |||||||||||||||||||| Sbjct: 9000595 cgacgacgcgtggggccgcg 9000614
>dbj|AP004753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0508B05 Length = 166165 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 331 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggtggggagttcg 390 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||||||||| ||| Sbjct: 117551 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 117492 Query: 391 ctcc 394 |||| Sbjct: 117491 ctcc 117488
>dbj|AP005609.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0014M17 Length = 156778 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Minus Query: 331 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggtggggagttcg 390 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||||||||| ||| Sbjct: 44071 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 44012 Query: 391 ctcc 394 |||| Sbjct: 44011 ctcc 44008
>dbj|AK070310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047F16, full insert sequence Length = 3048 Score = 48.1 bits (24), Expect = 0.022 Identities = 54/64 (84%) Strand = Plus / Plus Query: 331 gaccatccaaaattgagcgcccagtatctgggagtgacctgccccaaggtggggagttcg 390 |||| ||||||||| |||| || | ||| ||| | ||||||||||| ||||||||| ||| Sbjct: 395 gaccgtccaaaattcagcgaccgggatccgggggcgacctgccccagggtggggagatcg 454 Query: 391 ctcc 394 |||| Sbjct: 455 ctcc 458
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ccccgcggaggagcggcggcag 247 |||||||||||||||||||||| Sbjct: 116347 ccccgcggaggagcggcggcag 116326
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22, complete sequence Length = 166052 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ccccgcggaggagcggcggcag 247 |||||||||||||||||||||| Sbjct: 35507 ccccgcggaggagcggcggcag 35486
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 gaccgccactgccgccagcgcc 147 |||||||||||||||||||||| Sbjct: 128408 gaccgccactgccgccagcgcc 128387
>emb|AJ347062.1|UBA347062 Uncultured bacterium 16S rRNA gene, clone TK36 Length = 433 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 gtgacctgccccaaggtgggga 385 |||||||||||||||||||||| Sbjct: 117 gtgacctgccccaaggtgggga 138
>emb|AJ347036.1|UBA347036 Uncultured bacterium 16S rRNA gene, clone TK17 Length = 1334 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 364 gtgacctgccccaaggtgggga 385 |||||||||||||||||||||| Sbjct: 115 gtgacctgccccaaggtgggga 136
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ccccgcggaggagcggcggcag 247 |||||||||||||||||||||| Sbjct: 14700053 ccccgcggaggagcggcggcag 14700032
>ref|XM_467923.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcggccccgcggaggagcggc 242 ||||||||||||||||||||| Sbjct: 152 gcggccccgcggaggagcggc 132
>gb|AC137923.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0066C04, complete sequence Length = 133944 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 132729 cgcggaggagcggcggcagcg 132709
>gb|AC145326.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0076C23 map near C53961S, complete sequence Length = 11139 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 5628 cgcggaggagcggcggcagcg 5608
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 126 gaccgccactgccgccagcgccggtgacc 154 ||||| |||||||| |||||||||||||| Sbjct: 3923398 gaccggcactgccggcagcgccggtgacc 3923426
>gb|AC139884.8| Mus musculus chromosome 6, clone RP23-343E20, complete sequence Length = 227769 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gctctacttctcttcattccc 274 ||||||||||||||||||||| Sbjct: 3656 gctctacttctcttcattccc 3676
>ref|XM_811457.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053508387.160) partial mRNA Length = 2319 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 cgccactgccgccagcgccgg 149 ||||||||||||||||||||| Sbjct: 2180 cgccactgccgccagcgccgg 2200
>gb|AC110233.9| Mus musculus chromosome 6, clone RP23-68H1, complete sequence Length = 151295 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 gctctacttctcttcattccc 274 ||||||||||||||||||||| Sbjct: 28465 gctctacttctcttcattccc 28445
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 126 gaccgccactgccgccagcgccggtgacc 154 ||||| |||||||| |||||||||||||| Sbjct: 112389 gaccggcactgccggcagcgccggtgacc 112417
>emb|BX248346.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 13/14 Length = 316050 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 126 gaccgccactgccgccagcgccggtgacc 154 ||||| |||||||| |||||||||||||| Sbjct: 124116 gaccggcactgccggcagcgccggtgacc 124144
>emb|AL731616.5|OSJN00262 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073E02, complete sequence Length = 139080 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 106033 cgcggaggagcggcggcagcg 106053
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 ccgccactgccgccagcgccg 148 ||||||||||||||||||||| Sbjct: 952274 ccgccactgccgccagcgccg 952254
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 25888623 cgcggaggagcggcggcagcg 25888643
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 11614997 cgcggaggagcggcggcagcg 11615017
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 10329072 cgcggaggagcggcggcagcg 10329092 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagc 248 |||||||||||||||||||| Sbjct: 22063590 cgcggaggagcggcggcagc 22063571
>dbj|AP006584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1197G05 Length = 130823 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 36609 cgcggaggagcggcggcagcg 36629
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 133299 cgcggaggagcggcggcagcg 133319
>dbj|AP005002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0486G03 Length = 146713 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 222 gcggccccgcggaggagcggc 242 ||||||||||||||||||||| Sbjct: 40568 gcggccccgcggaggagcggc 40588
>dbj|AK099679.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070O18, full insert sequence Length = 2856 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 59 cgcggaggagcggcggcagcg 39
>dbj|AK072585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133I16, full insert sequence Length = 2523 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 85 cgcggaggagcggcggcagcg 65
>dbj|AK072373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023065D01, full insert sequence Length = 3109 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 87 cgcggaggagcggcggcagcg 67
>dbj|AK068344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149L20, full insert sequence Length = 1354 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gcggccccgcggaggagcggc 242 ||||||||||||||||||||| Sbjct: 153 gcggccccgcggaggagcggc 133
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 90 ggggccgcgaccgccggcggccgcgccga 118 ||||||| ||| ||||||||||||||||| Sbjct: 1736530 ggggccgagacggccggcggccgcgccga 1736502
>dbj|AK062650.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E06, full insert sequence Length = 529 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 75 cgcggaggagcggcggcagcg 55
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 11694186 cgcggaggagcggcggcagcg 11694206
>emb|AL731629.2|OSJN00274 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0061C13, complete sequence Length = 139226 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cgcggaggagcggcggcagcg 249 ||||||||||||||||||||| Sbjct: 14885 cgcggaggagcggcggcagcg 14905
>ref|XM_523706.1| PREDICTED: Pan troglodytes similar to nuclear receptor subfamily 2, group F, member 6; ERBA-related gene-2; v-erb-a avian erythroblastic leukemia viral oncogene homolog-like 2 (LOC468317), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 375 cgccactgccgccagcgccg 356
>ref|XM_464884.1| Oryza sativa (japonica cultivar-group), mRNA Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgacgacgcgtggggccgcg 98 |||||||||||||||||||| Sbjct: 437 cgacgacgcgtggggccgcg 456
>gb|BC084544.1| Homo sapiens cDNA clone IMAGE:4591955, partial cds Length = 1814 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 563 cgccactgccgccagcgccg 544
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 cccagctcagtgcgcgcgacgacg 86 ||||| |||||||||||||||||| Sbjct: 1925646 cccaggtcagtgcgcgcgacgacg 1925669
>ref|XM_600248.2| PREDICTED: Bos taurus similar to Tripartite motif protein 32 (Zinc-finger protein HT2A) (72 kDa Tat-interacting protein) (LOC521975), mRNA Length = 2049 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 ccgcggaggagcggcggcag 247 |||||||||||||||||||| Sbjct: 422 ccgcggaggagcggcggcag 441
>ref|NM_005234.3| Homo sapiens nuclear receptor subfamily 2, group F, member 6 (NR2F6), mRNA Length = 1804 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 587 cgccactgccgccagcgccg 568
>gb|BC063018.1| Homo sapiens nuclear receptor subfamily 2, group F, member 6, mRNA (cDNA clone IMAGE:5228022), partial cds Length = 1783 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 527 cgccactgccgccagcgccg 508
>gb|BC002669.2| Homo sapiens nuclear receptor subfamily 2, group F, member 6, mRNA (cDNA clone IMAGE:3608765), partial cds Length = 1821 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 587 cgccactgccgccagcgccg 568
>gb|AC091091.2| Gallus gallus clone WAG-93J15, complete sequence Length = 136822 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 gccccgcggaggagcggcgg 244 |||||||||||||||||||| Sbjct: 8126 gccccgcggaggagcggcgg 8145
>emb|X12794.1|HSEAR2 Human v-erbA related ear-2 gene Length = 2380 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 1167 cgccactgccgccagcgccg 1148
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccggcggccgcgccgacg 120 |||||||||||||||||||| Sbjct: 12854 cgccggcggccgcgccgacg 12835
>emb|AJ438039.1|RLE438039 Rhizobium leguminosarum bv. phaseoli panB (partial), oxyR and katG genes Length = 4754 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccggcggccgcgccgacg 120 |||||||||||||||||||| Sbjct: 2410 cgccggcggccgcgccgacg 2429
>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence Length = 198202 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 tggctgactggcttccgccccacc 307 ||||| |||||||||||||||||| Sbjct: 181775 tggctcactggcttccgccccacc 181752
>emb|CR932802.1| Mus musculus chromosome 2, clone GenSys-198F12 strain 129/Sv, complete sequence Length = 99647 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gccccgcggaggagcggcggcagc 248 ||||| |||||||||||||||||| Sbjct: 79082 gccccacggaggagcggcggcagc 79059
>emb|CR932799.1| Mus musculus chromosome 2, clone RPCI-22-207E02 strain 129/Sv, complete sequence Length = 151675 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gccccgcggaggagcggcggcagc 248 ||||| |||||||||||||||||| Sbjct: 24341 gccccacggaggagcggcggcagc 24318
>gb|AE011996.1| Xanthomonas axonopodis pv. citri str. 306, section 374 of 469 of the complete genome Length = 10994 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gccgcgaccgccggcggccg 112 |||||||||||||||||||| Sbjct: 1166 gccgcgaccgccggcggccg 1185
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccggcggccgcgccgacg 120 |||||||||||||||||||| Sbjct: 4074 cgccggcggccgcgccgacg 4093
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 Length = 1841713 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 accgcgtcaacgaggggaga 215 |||||||||||||||||||| Sbjct: 373728 accgcgtcaacgaggggaga 373709
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 cgaccgccggcggccgcgcc 116 |||||||||||||||||||| Sbjct: 3786955 cgaccgccggcggccgcgcc 3786936
>gb|AC010646.5| Homo sapiens chromosome 19 clone LLNLR-277B12, complete sequence Length = 41461 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgccactgccgccagcgccg 148 |||||||||||||||||||| Sbjct: 26334 cgccactgccgccagcgccg 26353
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 cgccgacgaacgggaccgcc 132 |||||||||||||||||||| Sbjct: 1375376 cgccgacgaacgggaccgcc 1375357
>gb|AC003662.3| Homo sapiens chromosome 17, clone CTB-104N19, complete sequence Length = 94576 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 tggctgactggcttccgccccacc 307 ||||| |||||||||||||||||| Sbjct: 24704 tggctcactggcttccgccccacc 24681
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 101 cgccggcggccgcgccgacg 120 |||||||||||||||||||| Sbjct: 2898057 cgccggcggccgcgccgacg 2898038
>gb|AF126956.1|AF126956 Streptomyces coelicolor ferric uptake regulator homolog (furA) and catalase-peroxidase (catC) genes, complete cds Length = 3027 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 cgccggcggccgcgccgacg 120 |||||||||||||||||||| Sbjct: 1336 cgccggcggccgcgccgacg 1355
>dbj|AP005461.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0612G07 Length = 182548 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cgcggaggagcggcggcagc 248 |||||||||||||||||||| Sbjct: 101463 cgcggaggagcggcggcagc 101444
>emb|BX571892.9| Mouse DNA sequence from clone RP23-207B21 on chromosome 2, complete sequence Length = 170046 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 gccccgcggaggagcggcggcagc 248 ||||| |||||||||||||||||| Sbjct: 54658 gccccacggaggagcggcggcagc 54635
>dbj|AP006160.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1178F07 Length = 144454 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgacgacgcgtggggccgcg 98 |||||||||||||||||||| Sbjct: 41041 cgacgacgcgtggggccgcg 41060
>dbj|AP005803.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0060K08 Length = 159626 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cgacgacgcgtggggccgcg 98 |||||||||||||||||||| Sbjct: 73204 cgacgacgcgtggggccgcg 73223
>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete sequence Length = 177152 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 tggctgactggcttccgccccacc 307 ||||| |||||||||||||||||| Sbjct: 163988 tggctcactggcttccgccccacc 163965
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gaccgccactgccgccagcg 145 |||||||||||||||||||| Sbjct: 3318599 gaccgccactgccgccagcg 3318618
>gb|AF038569.1|AF038569 Schistocerca americana embryonic hemolymph protein precursor, mRNA, complete cds Length = 2307 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cgcgaccgcgtcaacgaggg 211 |||||||||||||||||||| Sbjct: 415 cgcgaccgcgtcaacgaggg 434
>gb|M21628.1|HSBGLYB Bovine herpesvirus type 2 glycoprotein B gene, complete cds Length = 9388 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ctcgggcggccccgcggagg 236 |||||||||||||||||||| Sbjct: 4663 ctcgggcggccccgcggagg 4682 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,047,962 Number of Sequences: 3902068 Number of extensions: 2047962 Number of successful extensions: 48916 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 70 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47514 Number of HSP's gapped (non-prelim): 1402 length of query: 394 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 372 effective length of database: 17,147,199,772 effective search space: 6378758315184 effective search space used: 6378758315184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
