ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl05a02 |
|---|---|
| Clone Library Name | barley_pub |
>HOX1A_MAIZE (P46605) Homeobox protein HOX1A| Length = 719 Score = 38.9 bits (89), Expect = 0.005 Identities = 20/57 (35%), Positives = 33/57 (57%) Frame = +2 Query: 260 RGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRST 430 RG+KGSQ + Y S++S RVLRSTS K+ + +P++ A ++ R++ Sbjct: 57 RGKKGSQGLTGQAYTLMSSNSDVRVLRSTSSSKTTSTEHVQAPVQPAAKRRKMSRAS 113
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 32.7 bits (73), Expect = 0.37 Identities = 39/140 (27%), Positives = 58/140 (41%), Gaps = 7/140 (5%) Frame = +2 Query: 8 SCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKT 187 S +R RS A + +R RGR ++G S RR RS T Sbjct: 291 STTRSRSTSVGKTRALTSRSRSRGRSPSTCRRG-------GGRSPRRRSRSP------ST 337 Query: 188 SASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSA-------RVLRST 346 +S Q +++ + SP T+G RG +GS+ + LRR SS+ R + Sbjct: 338 YSSCTTQRSQRAR--AESPTTRGARGSRGSRGGSRGGRLRRRGRSSSSSSPAHKRSRGGS 395 Query: 347 SKDKSKTPNEPVSPLRSAHS 406 +K + +P E LRS S Sbjct: 396 AKLRGVSPGEVGGSLRSVSS 415
>VAC7_YEAST (P53950) Vacuolar segregation protein 7| Length = 1165 Score = 32.3 bits (72), Expect = 0.49 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 11/108 (10%) Frame = +2 Query: 131 PISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKG----KRGRKG-----SQI 283 P SS R +S++++ + AS + KK S++ PT + R S Sbjct: 143 PSSSLRNKKSSLLVASNPAFASDVELSKKKPAVISNNMPTSNIALYQTARSANIHGPSST 202 Query: 284 TASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPL--RSAHSSPRVL 421 +ASK + + SA S+ +++ S TP P+ PL S + P+++ Sbjct: 203 SASKAFRKASAFSNNTAPSTSNNIGSNTPPAPLLPLPSLSQQNKPKII 250
>VE2_HPV38 (Q80910) Regulatory protein E2| Length = 441 Score = 32.3 bits (72), Expect = 0.49 Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Frame = +2 Query: 110 P*VSQDWPISSRREGRSAVIIYMDKTSASGL---VQENKKVGNDSSSPPTKGKRGRKGSQ 280 P S P+ + S + TS S Q ++ G +SSP T +R RKG + Sbjct: 197 PVTSSTPPVGDSTDSASRAALPEPSTSVSPERPPSQTARRYGRKASSPSTTSRRQRKGQR 256 Query: 281 ITASKKYLRRSAHSSARVLRSTSKD--KSKTPNEPVSPLR 394 T + RR + S +R +D +S + VSP R Sbjct: 257 ETTGTQ-RRRKSRSRSRSTNRGGRDTRRSSSRGSSVSPTR 295
>YJY1_SCHPO (Q9USN8) Hypothetical protein C132.01c in chromosome III| Length = 1021 Score = 32.3 bits (72), Expect = 0.49 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 8/53 (15%) Frame = +2 Query: 227 NDSSSPPTKG--------KRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 361 N+ S+P T G KRG+KGS++ +KK + + R R T+ ++S Sbjct: 751 NNQSTPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEES 803
>CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enhanced| expression protein) (PCEE) Length = 518 Score = 32.0 bits (71), Expect = 0.64 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%) Frame = +2 Query: 179 DKTSASGLVQENKKVGNDSSSPPTKGKRGR--KGSQITASKK-----YLRRSAHSSARVL 337 D S SG + + + S SPP + RG KGS++ S+K YL + H S Sbjct: 404 DSGSTSGGSKSQSRSRSRSDSPPRQVHRGAPYKGSEVRGSRKSKDCKYLTQKPHKSRS-- 461 Query: 338 RSTSKDKSKT 367 RS+S+ +S++ Sbjct: 462 RSSSRSRSRS 471
>MSH6_YEAST (Q03834) MutS protein homolog 6| Length = 1242 Score = 32.0 bits (71), Expect = 0.64 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 4/50 (8%) Frame = +2 Query: 275 SQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEP-VSPLRS---AHSSP 412 ++ T+ KK+ ++HSS+ R+ S+D SK + P +P RS +HS P Sbjct: 211 AETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQP 260
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 32.0 bits (71), Expect = 0.64 Identities = 41/142 (28%), Positives = 59/142 (41%), Gaps = 6/142 (4%) Frame = +2 Query: 2 SPSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMD 181 S S SR RSR G S +R R + G P ++ S+ G + Sbjct: 204 SGSRSRSRSRSG------SRTSRSRSK------TGTPSPNRSRSGSASGSGSDVGVPKKK 251 Query: 182 KTSASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRST--- 346 ASG QE KK G+DS PTK K+ R + S + + + A ++A + Sbjct: 252 ARKASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKAPAAADIFGDADDI 311 Query: 347 SKDKSKT-PNEPVSPLRSAHSS 409 S D+ + P SP+RS S Sbjct: 312 SDDEDEAGPAARKSPVRSKSRS 333
>SFRS4_HUMAN (Q08170) Splicing factor, arginine/serine-rich 4 (Pre-mRNA-splicing| factor SRP75) (SRP001LB) Length = 494 Score = 31.6 bits (70), Expect = 0.83 Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%) Frame = +2 Query: 2 SPSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMD 181 S S +R+ R+ E ++S +R R + E++ ++G S+ SS+++ + Sbjct: 348 SKSKDKRKGRKRSREESRSR-SRSRSKSERSRKRGSKRDSKAG--SSKKKKKEDTDRSQS 404 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGS-QITASKKYLR-RSAHSSARVLRSTSKD 355 ++ + + +E + ++SS +G+ G+ Q T S+ +S + RS SK Sbjct: 405 RSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKS 464 Query: 356 KSKTPNEPVSPLRSAHSSPRVLRS 427 SKT + S RSA SP RS Sbjct: 465 ASKTRSRSKSRSRSASRSPSRSRS 488
>SFRS4_MOUSE (Q8VE97) Splicing factor, arginine/serine-rich 4| Length = 489 Score = 31.2 bits (69), Expect = 1.1 Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 23/165 (13%) Frame = +2 Query: 2 SPSCSRRRS---REGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVII 172 S S SR RS R+G + +R R + E++ + SS+R+ Sbjct: 339 SRSRSRSRSKDKRKGRKRSRDESRSRSRSKSERSRKH-----------SSKRDS------ 381 Query: 173 YMDKTSASGLVQENKKVGNDSSSPP---------TKGKRGRKGSQIT-----------AS 292 K S+S + KK + S SP K + G++GS+ A Sbjct: 382 ---KVSSSSSSSKKKKDTDHSRSPSRSVSKEREHAKAESGQRGSRAEGESEAPNPEPRAR 438 Query: 293 KKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRVLRS 427 + +S + RS SK SKT + SP RSA SP RS Sbjct: 439 SRSTSKSKPNVPAESRSRSKSASKTRSRSKSPSRSASRSPSRSRS 483
>MLH_TETTH (P40631) Micronuclear linker histone polyprotein (MIC LH)| [Contains: Micronuclear linker histone-alpha; Micronuclear linker histone-beta; Micronuclear linker histone-delta; Micronuclear linker histone-gamma] Length = 633 Score = 31.2 bits (69), Expect = 1.1 Identities = 21/66 (31%), Positives = 31/66 (46%) Frame = +2 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 361 K+S+ G ++N K S S + RK + + SKK + RS SK KS Sbjct: 493 KSSSKG--KKNSKSNTRSKSKSKSASKSRKNA--SKSKKDTTNHGRQTRSKSRSESKSKS 548 Query: 362 KTPNEP 379 + PN+P Sbjct: 549 EAPNKP 554 Score = 30.4 bits (67), Expect = 1.9 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 3/121 (2%) Frame = +2 Query: 56 SPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKTSASGLVQENK---KVG 226 S R +G+ +V +G + SS+R S+ ++S+S + + + G Sbjct: 183 SKSRRSSSKGKSSVSKG-----RTKSTSSKRRADSSASQGRSQSSSSNRRKASSSKDQKG 237 Query: 227 NDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHS 406 SSS +GRK S T++K R S+ SS R S +K S + N+ S + S Sbjct: 238 TRSSSRKASNSKGRKNS--TSNK---RNSSSSSKRSSSSKNKKSSSSKNKKSSSSKGRKS 292 Query: 407 S 409 S Sbjct: 293 S 293
>VE2_HPV47 (P22420) Regulatory protein E2| Length = 506 Score = 31.2 bits (69), Expect = 1.1 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 4/97 (4%) Frame = +2 Query: 119 SQDWPISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKK 298 S+ +SRR GR + + S S + + GN +G++GR GS ++ Sbjct: 311 SRSTSTTSRRGGRGSSTRQRSR-SPSTYTSKRSREGNTRGRG--RGRQGRAGSSGGREQR 367 Query: 299 YLRRS----AHSSARVLRSTSKDKSKTPNEPVSPLRS 397 RRS SS RV R + K + +P+E LRS Sbjct: 368 RRRRSFSTSPDSSKRVRRESPKYRGVSPSEVGKQLRS 404
>RED2_HUMAN (Q9NS39) Double-stranded RNA-specific editase B2 (EC 3.5.-.-)| (dsRNA adenosine deaminase B2) (RNA-dependent adenosine deaminase 3) (RNA-editing deaminase 2) (RNA-editing enzyme 2) Length = 739 Score = 31.2 bits (69), Expect = 1.1 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = +2 Query: 185 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYL 304 +++S V+EN+ VGN ++ PP G R R G+ K+ L Sbjct: 63 STSSAEVKENRNVGNLAARPPPSGDRARGGAPGAKRKRPL 102
>YBL7_YEAST (P38213) Protein YBR007C| Length = 736 Score = 31.2 bits (69), Expect = 1.1 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +2 Query: 188 SASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKT 367 S++ + + + ND S PPT + K S K L +S R+ +K+K Sbjct: 337 SSTSTITKTNTMTNDISLPPTPPYKAHKKKTSLNSLKKLFKSP-------RTRAKNKKDL 389 Query: 368 PNEPVSPLRSAHSS 409 +E SP+RSA +S Sbjct: 390 ESEGSSPIRSATNS 403
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 31.2 bits (69), Expect = 1.1 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 20/158 (12%) Frame = +2 Query: 5 PSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDK 184 P+ R R AA P + RGR E+ V+ +Q +S REG ++ Sbjct: 1995 PAEGWRSPRSQKSAAAAGPQGK-RGRNEQKVEAAAEAGAQ----ASTREGNPKS--RGER 2047 Query: 185 TSASGLVQENKKVGNDSSSPPT---------------KGKRGR-----KGSQITASKKYL 304 +AS ++ + D S P T K KRGR G A ++ L Sbjct: 2048 EAASEPKRDRRDPSTDKSGPDTFPVEVLERKPPEKTYKSKRGRARSTRSGMDRAAHQRSL 2107 Query: 305 RRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSPRV 418 +A ++ + + + +P E SP + + SSP++ Sbjct: 2108 EMAARAAGQAADKEAGPAAASPQESESPQKGSGSSPQL 2145
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 30.8 bits (68), Expect = 1.4 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 2/134 (1%) Frame = +2 Query: 2 SPSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMD 181 SP+ ++R R+G E G GE+ + SR +GR+ Sbjct: 250 SPTTRKKRQRQGEGEG--------EGEGEETNYRRQ---------RSRSKGRT------- 285 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQ--ITASKKYLRRSAHSSARVLRSTSKD 355 +T G + + + S+ PT +RGR G + T S+ R +HS +R T+ Sbjct: 286 ETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGPTTRSQSRSRSRSHSRSRSRGGTASR 345 Query: 356 KSKTPNEPVSPLRS 397 +P+E + +RS Sbjct: 346 VGVSPDEVGTRVRS 359
>PRP4B_MOUSE (Q61136) Serine/threonine-protein kinase PRP4 homolog (EC 2.7.11.1)| (PRP4 pre-mRNA-processing factor 4 homolog) (Pre-mRNA protein kinase) Length = 1007 Score = 30.4 bits (67), Expect = 1.9 Identities = 34/147 (23%), Positives = 58/147 (39%), Gaps = 12/147 (8%) Frame = +2 Query: 2 SPSCSRRRSREG--VLEAAKSP--GARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVI 169 SP+ + +S E + + KSP R R R +K+ P+ R + + Sbjct: 258 SPAEEKMKSEEKGKIKDRKKSPIVNERSRDRSKKSKS----------PVDLRDKSKDRRS 307 Query: 170 IYMDKTSASGLVQENKKVGNDSSSPPTKGKR--------GRKGSQITASKKYLRRSAHSS 325 ++ S + + KK S + GK GR + + S K +S S Sbjct: 308 RSKERKSKRSEIDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKLRDKSRRSR 367 Query: 326 ARVLRSTSKDKSKTPNEPVSPLRSAHS 406 + +L +SK+P+ +SP R A S Sbjct: 368 SPLLNDRRSKQSKSPSRTLSPGRRAKS 394
>RSP1_CAEEL (Q23121) Probable splicing factor, arginine/serine-rich 1| (RNA-binding protein srp-5) (CeSRp75) Length = 312 Score = 30.4 bits (67), Expect = 1.9 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 7/67 (10%) Frame = +2 Query: 233 SSSPPTKGKRGRKGSQITASK------KYLRRSAHSSARVLRSTSKDK-SKTPNEPVSPL 391 S SPP + +R K + S+ + R + S +V RS S + S++P+E SP Sbjct: 238 SRSPPKRSRRESKSKSRSRSRSRSADNRKSRSPSRSPKKVDRSPSPPRGSRSPSEKGSPR 297 Query: 392 RSAHSSP 412 RS +SP Sbjct: 298 RSRSASP 304
>TWST2_RAT (P97831) Twist-related protein 2| Length = 160 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = +2 Query: 149 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 298 EG S+ + +D TS L ++ K+ G + PT GKRG+KGS S + Sbjct: 3 EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62 Query: 299 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 394 L+ S R+L + + ++++ NE + LR Sbjct: 63 ELQ-----SQRILANVRERQRTQSLNEAFAALR 90
>TWST2_MOUSE (Q9D030) Twist-related protein 2 (Dermis expressed protein 1)| (Dermo-1) Length = 160 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = +2 Query: 149 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 298 EG S+ + +D TS L ++ K+ G + PT GKRG+KGS S + Sbjct: 3 EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62 Query: 299 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 394 L+ S R+L + + ++++ NE + LR Sbjct: 63 ELQ-----SQRILANVRERQRTQSLNEAFAALR 90
>TWST2_HUMAN (Q8WVJ9) Twist-related protein 2 (Dermis expressed protein 1)| (Dermo-1) Length = 160 Score = 30.4 bits (67), Expect = 1.9 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Frame = +2 Query: 149 EGRSAVIIYMDK--TSASGLVQENKKVG--------NDSSSPPTKGKRGRKGSQITASKK 298 EG S+ + +D TS L ++ K+ G + PT GKRG+KGS S + Sbjct: 3 EGSSSPVSPVDSLGTSEEELERQPKRFGRKRRYSKKSSEDGSPTPGKRGKKGSPSAQSFE 62 Query: 299 YLRRSAHSSARVLRST-SKDKSKTPNEPVSPLR 394 L+ S R+L + + ++++ NE + LR Sbjct: 63 ELQ-----SQRILANVRERQRTQSLNEAFAALR 90
>YR871_MIMIV (Q5UP41) Hypothetical protein R871| Length = 561 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +2 Query: 227 NDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 361 N SSS RGR + +SKK+ H S++ +S+ +DKS Sbjct: 122 NKSSSKDKSPSRGRSPKRHKSSKKHKSSKKHKSSKHDKSSKRDKS 166
>SFRS8_HUMAN (Q12872) Splicing factor, arginine/serine-rich 8 (Suppressor of| white apricot protein homolog) Length = 951 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Frame = +2 Query: 287 ASKKYLR-RSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSP 412 AS+K R RS H + RS S+ KSK ++ VSP + A P Sbjct: 837 ASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRP 879
>SWR1_YARLI (Q6CA87) Helicase SWR1 (EC 3.6.1.-)| Length = 1772 Score = 30.4 bits (67), Expect = 1.9 Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 1/99 (1%) Frame = +2 Query: 86 EKAVQQGLP*VSQDWPISSRREGR-SAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKR 262 E+ QQ Q+ ++SRR R SA K+ + ++K + S +KGK Sbjct: 308 EEQEQQEEEEEEQEEEVTSRRGSRRSAPTKAKGKSKTASKTSKSKSKASSKSKSKSKGKG 367 Query: 263 GRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEP 379 + S+++ S++Y+ V S+ ++ PN+P Sbjct: 368 QARASKLSKSRRYVN-------AVDSSSEEESDYDPNKP 399
>CWC27_USTMA (Q4P7H2) Peptidyl-prolyl isomerase CWC27 (EC 5.2.1.8)| Length = 485 Score = 30.0 bits (66), Expect = 2.4 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 5/80 (6%) Frame = +2 Query: 188 SASGLVQENKKVGNDS--SSPPTKGKRGRKGSQITAS-KKYLRRSAHSSA--RVLRSTSK 352 S+ L++++K + + +S TK + I++ K++L +S+ S+ V + SK Sbjct: 236 SSHDLLKDDKHLSRQTIETSKSTKANTPAVSANISSKEKRFLAQSSSSTTPPAVTKQASK 295 Query: 353 DKSKTPNEPVSPLRSAHSSP 412 D + P + L+S HS P Sbjct: 296 DGTSDAPHPTATLKSEHSGP 315
>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein| 89) Length = 8081 Score = 29.6 bits (65), Expect = 3.2 Identities = 28/148 (18%), Positives = 64/148 (43%), Gaps = 6/148 (4%) Frame = +2 Query: 2 SPSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMD 181 SP+ + + E KSP + EK+ ++ +++ P S ++ S V + D Sbjct: 1736 SPTKKEKSPEKSAAEEVKSPTKK-----EKSPEKS----AEEKPKSPTKKESSPVKMADD 1786 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 361 + + +++ + + + PTK ++ + S K ++ S+ ++ + K Sbjct: 1787 EVKSPTKKEKSPEKVEEKPASPTKKEKTPEKSAAEELKSPTKKEKSPSSPTKKTGDESKE 1846 Query: 362 KTPNEP------VSPLRSAHSSPRVLRS 427 K+P +P +P +S SP+ +S Sbjct: 1847 KSPEKPEEKPKSPTPKKSPPGSPKKKKS 1874
>YOJ4_CAEEL (P34627) Hypothetical protein ZK353.4| Length = 305 Score = 29.6 bits (65), Expect = 3.2 Identities = 21/76 (27%), Positives = 34/76 (44%) Frame = +2 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKS 361 K S + L E K+ N SSS + G +I + KY + + + T+ ++ Sbjct: 159 KNSLTDLKNEATKMANTSSSA---NRTGEISVEIVSPSKYFQCLLPTHNLIPEPTTAVQA 215 Query: 362 KTPNEPVSPLRSAHSS 409 TP +P+S SA S Sbjct: 216 STPEKPMSSAESAMES 231
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 29.6 bits (65), Expect = 3.2 Identities = 34/155 (21%), Positives = 56/155 (36%), Gaps = 13/155 (8%) Frame = +2 Query: 2 SPSCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMD 181 S + S+ ++R A++ ++ R R + S SS S+ Sbjct: 558 SENKSKNKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSS 617 Query: 182 KTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRS------ 343 +S SG + SSS RGR ++ ++ + R ++ + RS Sbjct: 618 SSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSMDRKRRDTSGLERSHKSSKG 677 Query: 344 -------TSKDKSKTPNEPVSPLRSAHSSPRVLRS 427 SKDKS P+ S S+ S R RS Sbjct: 678 GSSRDRKGSKDKSSRPDRKRSISESSRSGKRSSRS 712
>ECM32_YEAST (P32644) Putative ATP-dependent RNA helicase ECM32 (EC 3.6.1.-)| (Extracellular matrix protein 32) (Helicase 1) (scHelI) (DNA helicase B) (DNA helicase III) (Hcs B) (Modulator of translation termination protein 1) Length = 1121 Score = 29.6 bits (65), Expect = 3.2 Identities = 28/118 (23%), Positives = 47/118 (39%) Frame = +2 Query: 44 EAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKTSASGLVQENKKV 223 E + GE + LP ++ S + GR + IY+ ++ +K Sbjct: 107 ECGEESNLNANRNGEVLCDKCLPKSNRAKDFVSEKSGRF-LYIYLGLNETQNSTRKPRKK 165 Query: 224 GNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRS 397 G +GK+GRKG++I KK + S R+ K+ S + S LR+ Sbjct: 166 GGRRVG---RGKKGRKGAKIKKEKKETFEAKIS--RIAYEVKKENSTIQSSSSSNLRN 218
>H14_MOUSE (P43274) Histone H1.4 (H1 VAR.2) (H1e)| Length = 218 Score = 29.3 bits (64), Expect = 4.1 Identities = 20/82 (24%), Positives = 34/82 (41%) Frame = +2 Query: 185 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 364 T ASG + NKK + + P K K + + K +++A +A +ST K K Sbjct: 98 TGASGSFKLNKKAASGEAKPKAKRAGAAKAKKPAGAAKKPKKAA-GTATAKKSTKKTPKK 156 Query: 365 TPNEPVSPLRSAHSSPRVLRST 430 + SP+ ++T Sbjct: 157 AKKPAAAAGAKKAKSPKKAKAT 178
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +2 Query: 179 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 352 D +SA QE+ + PPT+G+ R+G + A RRSA R R+ S+ Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 29.3 bits (64), Expect = 4.1 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = +2 Query: 179 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSK 352 D +SA QE+ + PPT+G+ R+G + A RRSA R R+ S+ Sbjct: 245 DNSSAQAPRQEDSRPARARPGPPTRGR--RRGRRPAAPGPASRRSARLRRRQPRTNSR 300
>DNAJ_XANOR (Q5H185) Chaperone protein dnaJ| Length = 376 Score = 29.3 bits (64), Expect = 4.1 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = +2 Query: 8 SCSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKT 187 SC S +G ++ + C GRG+ +Q+G+ + Q P +GR +I KT Sbjct: 147 SCHGSGSEDGKVQTCGT----CHGRGQVRIQRGIFAMQQSCP---HCDGRGTLIQNPCKT 199 Query: 188 -SASGLVQENK 217 +G V+ENK Sbjct: 200 CHGAGRVEENK 210
>YCF3_MARPO (P12202) Photosystem I assembly protein ycf3| Length = 167 Score = 28.9 bits (63), Expect = 5.4 Identities = 12/34 (35%), Positives = 20/34 (58%) Frame = +2 Query: 71 CRGRGEKAVQQGLP*VSQDWPISSRREGRSAVII 172 C RGE+A+QQG P S+ W + + A+++ Sbjct: 116 CHYRGEQAIQQGDPEASETWFDQAAEYWKQAILL 149
>GYRA_RICPR (P41080) DNA gyrase subunit A (EC 5.99.1.3)| Length = 905 Score = 28.9 bits (63), Expect = 5.4 Identities = 18/66 (27%), Positives = 33/66 (50%) Frame = +3 Query: 123 RTGLSVPAEKVGRRSSFIWTKHLLLVLFRRIKKLGMIHHLLLPRGKGEGKGPRLQQVKSI 302 R+GLS+ E + + F+ + H ++ F I K+ + LP +GKG + + S+ Sbjct: 558 RSGLSMRDEDITTQV-FVGSTHTPMLFFSNIGKVYSLKLYKLPLSNPQGKGRPMVNILSL 616 Query: 303 SGDLHI 320 + HI Sbjct: 617 QENEHI 622
>FMT_ENTFA (Q82ZD8) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 313 Score = 28.9 bits (63), Expect = 5.4 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -1 Query: 409 TTMSGSQWTYWLIRCLTLVF*SRAKNPGTTMCRSPEILFTCCNLG 275 TT G+ W W + LT + PGT + RS + L+ C G Sbjct: 236 TTYQGTNWKIWAVTPLTE---TTTSAPGTIIQRSKKALWIACGEG 277
>KITM_MACFA (Q9N0C5) Thymidine kinase 2, mitochondrial precursor (EC 2.7.1.21)| (Mt-TK) Length = 265 Score = 28.9 bits (63), Expect = 5.4 Identities = 16/48 (33%), Positives = 22/48 (45%) Frame = +2 Query: 56 SPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKTSASG 199 SPG+ G G + VQ+G WP RE +I ++ ASG Sbjct: 21 SPGSPASGPGSRRVQRGA------WPSDKEREKEKKSVICVEGNIASG 62
>KC13_YEAST (P39962) Casein kinase I homolog 3 (EC 2.7.11.1)| Length = 524 Score = 28.9 bits (63), Expect = 5.4 Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 3/97 (3%) Frame = +2 Query: 134 ISSRREGRSAVIIYMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRS 313 +++ + R+ + K A ++ SS+P + K+ +I + KY+ + Sbjct: 370 VNTNSKTRNTTPVATPKQQAQNSYNKDNSKSRISSNPQSFTKQQHVLKKIEPNSKYIPET 429 Query: 314 AHSSARVLRSTSK---DKSKTPNEPVSPLRSAHSSPR 415 + R ++S S+ S T N P P S+ ++P+ Sbjct: 430 HSNLQRPIKSQSQTYDSISHTQNSPFVPYSSSKANPK 466
>TTKA_DROME (P42282) Protein tramtrack, alpha isoform (Tramtrack p88)| (Repressor protein fushi tarazu) Length = 813 Score = 28.5 bits (62), Expect = 7.1 Identities = 12/51 (23%), Positives = 26/51 (50%) Frame = +2 Query: 173 YMDKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSS 325 Y + + QE+ +++PP + G+KG++ ++ +RR A S+ Sbjct: 531 YQGNEAEATPAQEDSPAAETATAPPPAPRSGKKGAKRPIQRRRVRRKAQST 581
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 28.5 bits (62), Expect = 7.1 Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 7/92 (7%) Frame = +2 Query: 122 QDWPISSRREGRSAVIIYMDKTSASGL-------VQENKKVGNDSSSPPTKGKRGRKGSQ 280 +DW ++ R GRS +++ D +A G+ V GN G+ GR GS Sbjct: 399 RDWVLAEFRSGRSPIMVATD-VAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGST 457 Query: 281 ITASKKYLRRSAHSSARVLRSTSKDKSKTPNE 376 TA + + A +++ + K P E Sbjct: 458 GTAISFFTEGNKSLGAALIKIMREAKQDIPEE 489
>DNAJ_XANCP (Q8PAK8) Chaperone protein dnaJ| Length = 376 Score = 28.5 bits (62), Expect = 7.1 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%) Frame = +2 Query: 11 CSRRRSREGVLEAAKSPGARCRGRGEKAVQQGLP*VSQDWPISSRREGRSAVIIYMDKT- 187 C S +G +E A C GRG+ +Q+G+ + Q P +GR +I KT Sbjct: 148 CHGSGSEDGKVEVC----ATCHGRGQVRIQRGIFAMQQSCP---HCDGRGTLIQNPCKTC 200 Query: 188 SASGLVQENK 217 +G V+E+K Sbjct: 201 HGAGRVEEDK 210
>NIM1_NEUCR (P48479) G2-specific protein kinase nim-1 (EC 2.7.11.1)| Length = 779 Score = 28.5 bits (62), Expect = 7.1 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 1/79 (1%) Frame = +2 Query: 179 DKTSASGLVQENKKVGNDSSSP-PTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKD 355 D++ A LV K++ S +P T R R + L S + L + SK Sbjct: 531 DESEAEALVPSPKRITKSSKNPFSTVTTRSRPSLNSQQNSNVLPIHGLRSKQTLATRSKT 590 Query: 356 KSKTPNEPVSPLRSAHSSP 412 S + PLRSA S+P Sbjct: 591 VSGVSSIGQHPLRSAPSAP 609
>Y521_ARCFU (O29729) Hypothetical acetyltransferase AF0521 (EC 2.3.1.-)| Length = 147 Score = 28.1 bits (61), Expect = 9.2 Identities = 30/82 (36%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Frame = +3 Query: 66 RGAE--AAARKQFNKAYPK----SPRTGLSVPAEKVGRRSSFIWTKHLLLVLFRRIKKLG 227 RG E A RK+ K Y K + G+ V AE G F+ +F R KK+G Sbjct: 23 RGLEDYAYTRKRDVKNYFKWLLSRDKDGVMV-AEIDGEAVGFVACDTNWFSIFER-KKVG 80 Query: 228 MIHHL-LLPRGKGEGKGPRLQQ 290 IH L +LP +GEG G +L + Sbjct: 81 EIHELFVLPEFRGEGIGAKLME 102
>RIF1_HUMAN (Q5UIP0) Telomere-associated protein RIF1 (Rap1-interacting factor 1| homolog) Length = 2472 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/45 (31%), Positives = 23/45 (51%) Frame = +2 Query: 278 QITASKKYLRRSAHSSARVLRSTSKDKSKTPNEPVSPLRSAHSSP 412 QIT ++K LRRS+ + V+ ST++ + K + R P Sbjct: 1406 QITPNQKTLRRSSRRRSEVVESTTESQDKENSHQKKERRKEEEKP 1450
>VIT2_FUNHE (Q98893) Vitellogenin-2 precursor (Vitellogenin II) (VTG II)| [Contains: Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2 (LV2)] Length = 1687 Score = 28.1 bits (61), Expect = 9.2 Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = +2 Query: 185 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAH--SSARVLRSTSKDK 358 +S+SG + ++ + SSS + R S + S LRR++ A L TSK Sbjct: 1089 SSSSGSSRSSRSRSSSSSSSSSSSSSSRSSSSSSRSSSSLRRNSKMLDLADPLNITSKRS 1148 Query: 359 SKTPNEPVSPLRSAHSS 409 S + + S S+ SS Sbjct: 1149 SSSSSSSSSSSSSSSSS 1165
>H12_HUMAN (P16403) Histone H1.2 (Histone H1d)| Length = 212 Score = 28.1 bits (61), Expect = 9.2 Identities = 18/68 (26%), Positives = 29/68 (42%) Frame = +2 Query: 185 TSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDKSK 364 T ASG + NKK + + P K G K + + K +++A + + K K Sbjct: 98 TGASGSFKLNKKAASGEAKPKVKKAGGTKPKKPVGAAKKPKKAAGGA-----TPKKSAKK 152 Query: 365 TPNEPVSP 388 TP + P Sbjct: 153 TPKKAKKP 160
>EAF7_KLULA (Q6CX31) Chromatin modification-related protein EAF7| Length = 402 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/84 (23%), Positives = 33/84 (39%) Frame = +2 Query: 179 DKTSASGLVQENKKVGNDSSSPPTKGKRGRKGSQITASKKYLRRSAHSSARVLRSTSKDK 358 DK G ++ +V +S P +R + + + ++ + S + Sbjct: 184 DKAKLKGAESQDTQVEQESEEPR---EREKDIDEKDTEQNNVQAKQEMATTPPVSVGESV 240 Query: 359 SKTPNEPVSPLRSAHSSPRVLRST 430 S+ NEPV AH PR RST Sbjct: 241 SELANEPVDEPVDAHKKPRTRRST 264
>STRR_STRGR (P08076) Streptomycin biosynthesis operon possible regulatory| protein Length = 350 Score = 28.1 bits (61), Expect = 9.2 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +2 Query: 188 SASGLVQENKKVGNDSSSPPTKGKRGRK--GSQITASKKYLRRSAHSSARVLRSTSKDKS 361 S +G+ Q N ++G D + P GRK + + R + A V ST+ D Sbjct: 166 STAGVPQSNVRIGRDGRARPLDPTEGRKLASRLLQENPSASLRQIAAQAGVSPSTASDVR 225 Query: 362 KTPNEPVSPL 391 K + SPL Sbjct: 226 KRLSRGESPL 235
>SKB1_MOUSE (Q8CIG8) Protein arginine N-methyltransferase 5 (EC 2.1.1.-) (Shk1| kinase-binding protein 1 homolog) (SKB1 homolog) (Jak-binding protein 1) Length = 636 Score = 28.1 bits (61), Expect = 9.2 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = +1 Query: 139 FPQRRSVGGHHLYGQNIC--FWSCSGE*KSW 225 FP ++ + H GQNIC FW CS K W Sbjct: 583 FPIKQPITVHE--GQNICVRFWRCSNSKKVW 611 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,819,331 Number of Sequences: 219361 Number of extensions: 1401256 Number of successful extensions: 3939 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 3781 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3925 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
