ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04h07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CK002_HUMAN (Q9UID3) Protein C11orf2 (Another new gene 2 protein) 80 3e-15
2COG1_DROME (Q9VGC3) Putative conserved oligomeric Golgi complex ... 35 0.12
3EXOC8_XENLA (Q5U247) Exocyst complex component 8 33 0.47
4SSPP_STAAU (P81297) Staphopain A precursor (EC 3.4.22.48) (Staph... 33 0.47
5SSPP_STAAR (Q6GFE8) Staphopain A precursor (EC 3.4.22.48) (Staph... 33 0.47
6SSPP_STAAN (P65826) Staphopain A precursor (EC 3.4.22.48) (Staph... 32 1.0
7SSPP_STAAM (P65825) Staphopain A precursor (EC 3.4.22.48) (Staph... 32 1.0
8SSPP_STAAC (Q5HEL3) Staphopain A precursor (EC 3.4.22.48) (Staph... 32 1.0
9IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2 31 1.4
10VP61_NPVOP (O10270) 61 kDa protein homolog 31 1.4
11EXOC8_HUMAN (Q8IYI6) Exocyst complex component 8 (Exocyst comple... 31 1.4
12EXOC8_RAT (O54924) Exocyst complex component 8 (Exocyst complex ... 31 1.4
13EXOC8_MOUSE (Q6PGF7) Exocyst complex component 8 (Exocyst comple... 31 1.4
14EXO84_GIBZE (Q4HYZ2) Exocyst complex component EXO84 31 1.4
15COG1_YEAST (P53079) Conserved oligomeric Golgi complex component... 31 1.8
16YIBP_ECOLI (P37690) Hypothetical protein yibP 31 1.8
17COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1 31 1.8
18COG8_CAEEL (O44502) Putative conserved oligomeric Golgi complex ... 30 2.3
19SSPP_STAAW (Q8NVS9) Staphopain A precursor (EC 3.4.22.48) (Staph... 30 2.3
20SSPP_STAAS (Q6G824) Staphopain A precursor (EC 3.4.22.48) (Staph... 30 2.3
21COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component... 30 2.3
22EXO84_ASPFU (Q4WM32) Exocyst complex component exo84 30 3.1
23CDR2_MOUSE (P97817) Cerebellar degeneration-related protein 2 30 3.1
24EXO84_EMENI (Q5BFX0) Exocyst complex component exo84 30 4.0
25GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (G... 29 5.2
26CDR2_HUMAN (Q01850) Cerebellar degeneration-related protein 2 (P... 29 6.8
27Y759_FUSNN (Q8RFE6) Maf-like protein FN0759 29 6.8
28SYT_NANEQ (Q74MP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 29 6.8
29FHOD1_HUMAN (Q9Y613) FH1/FH2 domain-containing protein (Formin h... 29 6.8
30YQQ2_CAEEL (Q09305) Hypothetical protein F10B5.2 in chromosome II 29 6.8
31TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A pro... 29 6.8
32CR2AB_BACTK (P21254) Pesticidal crystal protein cry2Ab (Insectic... 28 8.9
33CI039_HUMAN (Q9NXG0) Protein C9orf39 28 8.9

>CK002_HUMAN (Q9UID3) Protein C11orf2 (Another new gene 2 protein)|
          Length = 782

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 37/81 (45%), Positives = 55/81 (67%)
 Frame = +1

Query: 220 INSTSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           +N   F+P+VY+D L ++  L  L+     M  +I+ LD+D+Q LVYENYNKFISATDTI
Sbjct: 63  LNGAHFDPEVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDTI 122

Query: 400 KRMKTNIAGMETNMEQLLSKI 462
           ++MK +   ME  M++L + +
Sbjct: 123 RKMKNDFRKMEDEMDRLATNM 143



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>COG1_DROME (Q9VGC3) Putative conserved oligomeric Golgi complex component 1|
          Length = 886

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 20/66 (30%), Positives = 36/66 (54%)
 Frame = +1

Query: 253 MDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIAGME 432
           +D L +Q ++  + + H K+ + ++N   +L+  V E Y   + A DTI  M+T+     
Sbjct: 10  VDTLFEQHSVSEIDEVHKKIQSVVENKREELRTHVGERYRDLLQAADTIAAMQTSAG--- 66

Query: 433 TNMEQL 450
           T MEQ+
Sbjct: 67  TLMEQV 72



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>EXOC8_XENLA (Q5U247) Exocyst complex component 8|
          Length = 685

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 220 INSTSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKN-LDTDLQMLVYENYNKFISATDT 396
           + S SF  + Y+ +L QQS+ +  LQ H +    + +     L+  VY+NY +FI     
Sbjct: 15  LESNSFQAEQYVKLLSQQSDGDRDLQEHRQRIQSLADETAQSLKRNVYQNYRQFIETAKE 74

Query: 397 IKRMK---TNIAGMETNMEQLLSKIT 465
           I  ++     ++ + T  + ++  +T
Sbjct: 75  ISYLEGEMYQLSHILTEQKSIMESVT 100



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>SSPP_STAAU (P81297) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 14/42 (33%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  +RHV++  E K++ TD++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKRHVQVNVEDKSVPTDVRNLAQKDYLSYVTSLDKI 70



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>SSPP_STAAR (Q6GFE8) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 14/42 (33%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  +RHV++  E K++ TD++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKRHVQVNVEDKSVPTDVRNLAQKDYLSYVTSLDKI 70



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>SSPP_STAAN (P65826) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/42 (30%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  ++HV++  E K++ TD++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKKHVQVNVEDKSVPTDVRNLAQKDYLSYVTSLDKI 70



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>SSPP_STAAM (P65825) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/42 (30%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  ++HV++  E K++ TD++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKKHVQVNVEDKSVPTDVRNLAQKDYLSYVTSLDKI 70



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>SSPP_STAAC (Q5HEL3) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 13/42 (30%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  ++HV++  E K++ TD++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKKHVQVNVEDKSVPTDVRNLAQKDYLSYVTSLDKI 70



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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +2

Query: 8   PISPASNLLPNLGAKWPPPSAPRRRQWTRRPGARA 112
           P +PA+   P   A+ P P  PR  Q  +RPGA A
Sbjct: 127 PEAPAAKAAPEAPAQRPTPGGPRPGQQQQRPGAPA 161



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>VP61_NPVOP (O10270) 61 kDa protein homolog|
          Length = 474

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/66 (31%), Positives = 32/66 (48%)
 Frame = +1

Query: 238 NPDVYMDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTN 417
           +PD   ++    + +EALL+  V   AE+  L  D     YE Y+K+IS   T  +  T 
Sbjct: 98  DPDARRNLNSVLARIEALLRVDVVNDAEVNVLSGDF----YEEYSKYISYQQTFAQTPTA 153

Query: 418 IAGMET 435
            A  +T
Sbjct: 154 SASQQT 159



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>EXOC8_HUMAN (Q8IYI6) Exocyst complex component 8 (Exocyst complex 84 kDa|
           subunit)
          Length = 725

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 220 INSTSFNPDVYMDVLVQQSNLEALLQRH-VKMAAEIKNLDTDLQMLVYENYNKFISATDT 396
           + S  F   +Y+  L QQS+ +  LQ H  ++ A  +    +L+  VY+NY +FI     
Sbjct: 17  LESGGFEARLYVKQLSQQSDGDRDLQEHRQRIQALAEETAQNLKRNVYQNYRQFIETA-- 74

Query: 397 IKRMKTNIAGMETNMEQLLSKIT 465
                  I+ +E+ M QL   +T
Sbjct: 75  -----REISYLESEMYQLSHLLT 92



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>EXOC8_RAT (O54924) Exocyst complex component 8 (Exocyst complex 84 kDa|
           subunit)
          Length = 716

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 220 INSTSFNPDVYMDVLVQQSNLEALLQRH-VKMAAEIKNLDTDLQMLVYENYNKFISATDT 396
           + S  F   +Y+  L QQS+ +  LQ H  ++ A  +    +L+  VY+NY +FI     
Sbjct: 13  LESGGFEARLYVKQLSQQSDGDRDLQEHRQRVQALAEETAQNLKRNVYQNYRQFIETA-- 70

Query: 397 IKRMKTNIAGMETNMEQLLSKIT 465
                  I+ +E+ M QL   +T
Sbjct: 71  -----REISYLESEMYQLSHLLT 88



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>EXOC8_MOUSE (Q6PGF7) Exocyst complex component 8 (Exocyst complex 84 kDa|
           subunit)
          Length = 716

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 220 INSTSFNPDVYMDVLVQQSNLEALLQRH-VKMAAEIKNLDTDLQMLVYENYNKFISATDT 396
           + S  F   +Y+  L QQS+ +  LQ H  ++ A  +    +L+  VY+NY +FI     
Sbjct: 13  LESGGFEARLYVKQLSQQSDGDRDLQEHRQRVQALAEETAQNLKRNVYQNYRQFIETA-- 70

Query: 397 IKRMKTNIAGMETNMEQLLSKIT 465
                  I+ +E+ M QL   +T
Sbjct: 71  -----REISYLESEMYQLSHLLT 88



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>EXO84_GIBZE (Q4HYZ2) Exocyst complex component EXO84|
          Length = 679

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/80 (17%), Positives = 36/80 (45%)
 Frame = +1

Query: 211 LESINSTSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISAT 390
           ++ +      PD Y+   +  +  + + +    +      + TDLQ  V +N  +FI  +
Sbjct: 125 IKGLRDPKLKPDRYVQAALSDATEDQIREFEESLRQVKTRVGTDLQQSVMQNRTQFIKIS 184

Query: 391 DTIKRMKTNIAGMETNMEQL 450
              +++K+ +  ++  M +L
Sbjct: 185 KEAEKLKSEMRNLKNFMSEL 204



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>COG1_YEAST (P53079) Conserved oligomeric Golgi complex component 1 (Complexed|
           with DOR1 protein 3)
          Length = 417

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 12/63 (19%), Positives = 33/63 (52%)
 Frame = +1

Query: 262 LVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIAGMETNM 441
           L + S++  +    +++  ++   +   Q  + +NYNK +S TD++  +  N+  ++ + 
Sbjct: 7   LFRDSHIPQIKDYQLELQNDLTKTNEAFQKNLLKNYNKILSLTDSVNDLSLNLKNVDQDF 66

Query: 442 EQL 450
           + L
Sbjct: 67  KSL 69



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>YIBP_ECOLI (P37690) Hypothetical protein yibP|
          Length = 419

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +1

Query: 265 VQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIAGMETNME 444
           ++Q+  E  +QR     AE++   ++ Q L+YE   +    T  +   K  +AG+E++++
Sbjct: 166 LKQTREEVAMQR-----AELEEKQSEQQTLLYEQRAQQAKLTQALNERKKTLAGLESSIQ 220

Query: 445 Q 447
           Q
Sbjct: 221 Q 221



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>COG1_HUMAN (Q8WTW3) Conserved oligomeric Golgi complex component 1|
          Length = 980

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 292 LQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIAGM 429
           L+R V+  AEI++   +L+ +V E Y   I A DTI +M+    G+
Sbjct: 33  LERQVR--AEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAVGL 76



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>COG8_CAEEL (O44502) Putative conserved oligomeric Golgi complex component 8|
          Length = 743

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
 Frame = +1

Query: 265 VQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISA-------TDTIKRMKTNIA 423
           ++   LE + ++ V +A+E+K +D  +  L + NY  +  A       + T   M+    
Sbjct: 13  IRNMGLEEMRRQKVLLASELKAIDAQISDLAFNNYGTYADAGRATHDCSKTFGEMRDKTV 72

Query: 424 GMETNMEQLLS 456
            +    E+L S
Sbjct: 73  NLSDQAEELTS 83



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>SSPP_STAAW (Q8NVS9) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 12/42 (28%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  ++HV++  E K++ T+++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKKHVQVNVEDKSIPTEVRNLAQKDYLSYVTSLDKI 70



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>SSPP_STAAS (Q6G824) Staphopain A precursor (EC 3.4.22.48) (Staphylopain A)|
           (Staphylococcal cysteine proteinase A)
          Length = 388

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 12/42 (28%), Positives = 29/42 (69%)
 Frame = +1

Query: 274 SNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTI 399
           SN++A  ++HV++  E K++ T+++ L  ++Y  ++++ D I
Sbjct: 29  SNIKAKDKKHVQVNVEDKSIPTEVRNLAQKDYLSYVTSLDKI 70



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>COG1_MOUSE (Q9Z160) Conserved oligomeric Golgi complex component 1 (Low|
           density lipoprotein receptor defect B-complementing
           protein)
          Length = 980

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 292 LQRHVKMAAEIKNLDTDLQMLVYENYNKFISATDTIKRMKTNIAGM 429
           L+R V+  AEI++   +L+ +V E Y   I A DTI +M+    G+
Sbjct: 33  LERQVR--AEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAEGL 76



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>EXO84_ASPFU (Q4WM32) Exocyst complex component exo84|
          Length = 683

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = +1

Query: 265 VQQSNL-----EALLQRHVKMAAEIKN-LDTDLQMLVYENYNKFISATDTIKRMKTNIAG 426
           V +SNL     E  ++ +     +++N   TDLQ  VY+N  +FI  +   +++K  +  
Sbjct: 128 VDRSNLLANATEEEIEEYQNNLRKVRNRTSTDLQQNVYQNRTQFIKISKEAEKLKGEMRT 187

Query: 427 METNMEQLLSKI 462
           + T M +L + +
Sbjct: 188 LRTLMAELTTAL 199



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>CDR2_MOUSE (P97817) Cerebellar degeneration-related protein 2|
          Length = 455

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
 Frame = +1

Query: 280 LEALLQRHVKMAAEI----KNLDTDLQMLVYEN---YNKFISATDTIKRMKTNIAGMETN 438
           L  + ++H K+  ++    + L+   Q LV E+     K +S T+TI+ ++TNI  +++ 
Sbjct: 72  LRQMNEQHAKVYEQLDVTARELEETNQKLVAESKASQQKILSLTETIECLQTNIDHLQSQ 131

Query: 439 MEQLLS 456
           +E+L S
Sbjct: 132 VEELKS 137



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>EXO84_EMENI (Q5BFX0) Exocyst complex component exo84|
          Length = 666

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +1

Query: 211 LESINSTSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKN-LDTDLQMLVYENYNKFISA 387
           L ++   S   D Y+  L+  ++ E  ++ + +   ++KN   TDLQ  VY+N  +FI  
Sbjct: 117 LTALRDPSLPVDRYVTNLLANAS-EDDIREYQQALRKVKNRTSTDLQQNVYQNRTQFIRI 175

Query: 388 TDTIKRMKTNIAGMETNMEQLLSKI 462
           +    ++K  +  + + M +L + +
Sbjct: 176 SQEADKLKGEMKTLRSLMAELTTAL 200



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>GDF6_HUMAN (Q6KF10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 455

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +2

Query: 35  PNLGAK--WPPPS-APRRRQWTRRPGAR 109
           P  GA+  WPPPS AP  R W   PG R
Sbjct: 305 PGAGAEGSWPPPSGAPDARPWLPSPGRR 332



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>CDR2_HUMAN (Q01850) Cerebellar degeneration-related protein 2 (Paraneoplastic|
           cerebellar degeneration-associated antigen) (Major Yo
           paraneoplastic antigen)
          Length = 454

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/66 (27%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
 Frame = +1

Query: 280 LEALLQRHVKMAAEI----KNLDTDLQMLVYEN---YNKFISATDTIKRMKTNIAGMETN 438
           L  + ++H K+  ++    + L+   Q LV ++     K +S T+TI+ ++TNI  +++ 
Sbjct: 73  LRQMNEQHAKVYEQLDVTARELEETNQKLVADSKASQQKILSLTETIECLQTNIDHLQSQ 132

Query: 439 MEQLLS 456
           +E+L S
Sbjct: 133 VEELKS 138



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>Y759_FUSNN (Q8RFE6) Maf-like protein FN0759|
          Length = 192

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 18/78 (23%), Positives = 35/78 (44%)
 Frame = +1

Query: 214 ESINSTSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYENYNKFISATD 393
           E +    FN  V    + + S+ + + +R + +A      +  L+ +   N N+F+ A D
Sbjct: 12  EILKDAGFNFKVITSNIEEISDKKNITERILDIA------EKKLEQIAKNNINEFVLAAD 65

Query: 394 TIKRMKTNIAGMETNMEQ 447
           T+  +   I G   N E+
Sbjct: 66  TVVELDGKILGKPKNREE 83



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>SYT_NANEQ (Q74MP3) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 633

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +1

Query: 235 FNPDVYMDVLVQQSNLEALLQRHVKMAAEIKNLDTDLQMLV----YENYNKF 378
           + PD+++        +E  L  H K+  EIK +  D ++L+    +E+Y K+
Sbjct: 360 YMPDLHVFTKDLDEAVEQFLNMHKKIMEEIKKIGRDYELLINVASFEDYEKY 411



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>FHOD1_HUMAN (Q9Y613) FH1/FH2 domain-containing protein (Formin homolog|
           overexpressed in spleen) (FHOS) (Formin homology 2
           domain-containing protein 1)
          Length = 1163

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +1

Query: 244 DVYMDVL--VQQSNLEALLQRHVKMAAEIKNLDTDLQMLVYEN 366
           D + DV   ++Q  +EAL+QRH+  A    ++D   Q+++YEN
Sbjct: 291 DSFYDVTDALEQQGMEALVQRHLGTAG--TDVDLRTQLVLYEN 331



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>YQQ2_CAEEL (Q09305) Hypothetical protein F10B5.2 in chromosome II|
          Length = 357

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
 Frame = +1

Query: 319 EIKNLDTDLQMLVYENYNKFISAT-----DTIKRMKTNIAGMETNMEQLLS 456
           ++KN+D+ L    YENY  +   T     DT++R+   I G  T+  +L+S
Sbjct: 106 QLKNMDSSLAPYPYENYRSWYGLTDFITADTVERIHP-ILGRITSQAELVS 155



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>TNR6A_HUMAN (Q8NDV7) Trinucleotide repeat-containing gene 6A protein (CAG repeat|
            protein 26) (Glycin-tryptophan protein of 182 kDa) (GW182
            autoantigen) (GW1 protein) (EMSY interactor protein)
          Length = 1962

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 2    QPPISPASNLLPNLGAKWPPP 64
            QPP  P S+  PNL A+ PPP
Sbjct: 1349 QPPAQPLSSSQPNLRAQVPPP 1369



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>CR2AB_BACTK (P21254) Pesticidal crystal protein cry2Ab (Insecticidal|
           delta-endotoxin CryIIA(b)) (Crystaline entomocidal
           protoxin) (71 kDa crystal protein)
          Length = 633

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
 Frame = +1

Query: 238 NPDVYMDVLVQQSNLEALLQRHV------KMAAEIKNL-----DTDLQMLVYENYNKFIS 384
           N  +Y+D +V    + + L + V      ++ +E++NL      T+L   +     KF++
Sbjct: 45  NHSLYLDPIV--GTVASFLLKKVGSLVGKRILSELRNLIFPSGSTNLMQDILRETEKFLN 102

Query: 385 A---TDTIKRMKTNIAGMETNMEQ 447
               TDT+ R+   + G++ N+E+
Sbjct: 103 QRLNTDTLARVNAELTGLQANVEE 126



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>CI039_HUMAN (Q9NXG0) Protein C9orf39|
          Length = 1084

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 21/97 (21%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
 Frame = +1

Query: 229 TSFNPDVYMDVLVQQSNLEALLQRHVKMAAEIKNL-------DTDLQMLVYENYN----- 372
           T  N + Y ++  Q+S+   +L R   ++ + +N          +L +  Y+  N     
Sbjct: 641 TRVNREKYKNITAQKSSSNIILLRERIISLQQQNSVLQNAKKTAELSVKEYKEVNEKLLH 700

Query: 373 -------KFISATDTIKRMKTNIAGMETNMEQLLSKI 462
                  +F ++  TIK++  ++AG+    E LL K+
Sbjct: 701 QQQVSDQRFQTSRQTIKKLNLDLAGLRKEKEDLLKKL 737


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.127    0.336 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,943,176
Number of Sequences: 219361
Number of extensions: 734273
Number of successful extensions: 2250
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2247
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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