ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04h02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PEPL1_PONPY (Q5R7G6) Probable aminopeptidase NPEPL1 (EC 3.4.11.-... 28 5.3
2PEPL1_HUMAN (Q8NDH3) Probable aminopeptidase NPEPL1 (EC 3.4.11.-... 28 5.3
3AMPA_XANCP (Q8PCR4) Probable cytosol aminopeptidase (EC 3.4.11.1... 27 9.0
4XERD_RHIME (Q92ME3) Tyrosine recombinase xerD 27 9.0
5LOX_PSEAE (Q8RNT4) Oleic acid lipoxygenase precursor (EC 1.13.11.-) 27 9.0
6LOXA_PSEAE (Q9I4G8) Arachidonate 15-lipoxygenase precursor (EC 1... 27 9.0

>PEPL1_PONPY (Q5R7G6) Probable aminopeptidase NPEPL1 (EC 3.4.11.-)|
           (Aminopeptidase-like 1)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 357 EPQLMRTGCGCARAFPAVKNATSISRNLAEDSISL 253
           +P++  + C  ARAFP   + +  SR L + ++++
Sbjct: 117 QPEVFASACALARAFPLFTHRSGASRRLEKKTVTV 151



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>PEPL1_HUMAN (Q8NDH3) Probable aminopeptidase NPEPL1 (EC 3.4.11.-)|
           (Aminopeptidase-like 1)
          Length = 523

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 357 EPQLMRTGCGCARAFPAVKNATSISRNLAEDSISL 253
           +P++  + C  ARAFP   + +  SR L + ++++
Sbjct: 117 QPEVFASACALARAFPLFTHRSGASRRLEKKTVTV 151



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>AMPA_XANCP (Q8PCR4) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 493

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +3

Query: 192 GDPNRVYPLQIAAAAAEDRPGERWNLPPNFC 284
           GD  R   + IA A   +   E  NLPPN+C
Sbjct: 163 GDDARALAVGIATAEGVEFARELGNLPPNYC 193



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>XERD_RHIME (Q92ME3) Tyrosine recombinase xerD|
          Length = 311

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
 Frame = -3

Query: 309 AVKNATSISRNLAEDSISLXXXXXXXXPQFGADKPYSGHQFFFILSYFLLVG-RVEEWQP 133
           A K A ++ + L+ + ++          + G+D   +  +   ++      G RV E   
Sbjct: 103 APKKARTLPKTLSIEDVTRLIGQAEAEAKSGSDDVMAKLRMHALIELLYATGMRVSELVS 162

Query: 132 EGSPVLARSGERSLFPSKANQEQLAP 55
             + VLA++G   +   K N+E+L P
Sbjct: 163 LPASVLAQNGRFLIIRGKGNKERLVP 188



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>LOX_PSEAE (Q8RNT4) Oleic acid lipoxygenase precursor (EC 1.13.11.-)|
          Length = 685

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 293 VAFLTAGNARAQPQPVLINCGSDSATN 373
           +A    G  RA+  PV I CG D AT+
Sbjct: 314 IALFALGKDRARLLPVAIQCGQDPATH 340



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>LOXA_PSEAE (Q9I4G8) Arachidonate 15-lipoxygenase precursor (EC 1.13.11.33)|
           (15-LOX)
          Length = 685

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 293 VAFLTAGNARAQPQPVLINCGSDSATN 373
           +A    G  RA+  PV I CG D AT+
Sbjct: 314 IALFALGKDRARLLPVAIQCGQDPATH 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,513,665
Number of Sequences: 219361
Number of extensions: 746184
Number of successful extensions: 2186
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2186
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 1365190992
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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