Clone Name | bastl04g07 |
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Clone Library Name | barley_pub |
>SYT8_HUMAN (Q8NBV8) Synaptotagmin-8 (Synaptotagmin VIII) (SytVIII)| Length = 172 Score = 30.0 bits (66), Expect = 3.7 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = +1 Query: 196 PPASPLTHDPAASPGGVAGKVP*SSGDLGSETPWQRWIL 312 PP SP PA + + G +P DL + TPW RW L Sbjct: 18 PPVSPSAPAPAGTTA-IPGLIP----DLVAGTPWPRWAL 51
>SFR16_MOUSE (Q8CFC7) Splicing factor, arginine/serine-rich 16 (Suppressor of| white-apricot homolog 2) (Clk4-associating SR-related protein) Length = 653 Score = 29.6 bits (65), Expect = 4.9 Identities = 22/56 (39%), Positives = 29/56 (51%) Frame = +1 Query: 193 SPPASPLTHDPAASPGGVAGKVP*SSGDLGSETPWQRWILSRPAKTPSARLEMRLQ 360 SPP LT PAASP V K+ + G ET ++P TP RL++R+Q Sbjct: 514 SPPREKLTR-PAASPA-VGEKLKKTEPAAGKETG-----AAKPKLTPQERLKLRMQ 562
>SCFD2_MOUSE (Q8BTY8) Sec1 family domain-containing protein 2 (Syntaxin-binding| protein 1-like 1) (Neuronal Sec1) Length = 684 Score = 29.6 bits (65), Expect = 4.9 Identities = 17/56 (30%), Positives = 27/56 (48%) Frame = +3 Query: 294 MAAVDLIASCQDSIRQIGDEIADALVYLDAGTLEAFHFIGAFPLLLELGARAVCSL 461 M+A ++A Q Q+ ++ ++VYLDA E+ H+ LLE C L Sbjct: 1 MSAAGILAFAQQGWEQVLAKVKWSVVYLDAACAESLHWSCGSSRLLEAVKGPACHL 56
>MAST2_HUMAN (Q6P0Q8) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1798 Score = 29.3 bits (64), Expect = 6.4 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 1/112 (0%) Frame = -2 Query: 472 RRTSKLHTARAPSSRSRGNAPIKWNASRVPASRYTSASAISSPIWRMESWQDAIRSTAAM 293 ++ S LHT+R+ SS +R + S + ++ + + SP DA+ S Sbjct: 1237 KQASLLHTSRSLSSLNRS---LSSGESGPGSPTHSHSLSPRSPTQGYRVTPDAVHSVGGN 1293 Query: 292 ASHSLGPQKITEPSPRRRLVMRPDRG*GAKPEGS*R-R*PRLENTETSPLPP 140 +S S P SP RP G P+ + R PR ++ + PL P Sbjct: 1294 SSQSSSPSSSVPSSPAGSGHTRPSSLHGLAPKLQRQYRSPRRKSAGSIPLSP 1345
>NCAM2_MOUSE (O35136) Neural cell adhesion molecule 2 precursor (N-CAM 2) (RB-8| neural cell adhesion molecule) (R4B12) Length = 837 Score = 29.3 bits (64), Expect = 6.4 Identities = 19/75 (25%), Positives = 33/75 (44%) Frame = -2 Query: 472 RRTSKLHTARAPSSRSRGNAPIKWNASRVPASRYTSASAISSPIWRMESWQDAIRSTAAM 293 +R+ L AP S W + + S +A+ +S WR E ++T + Sbjct: 390 QRSMHLDIEYAPKFVSNQTMYYSWEGNPINISCDVTANPPASIHWRREKLLLPAKNTTHL 449 Query: 292 ASHSLGPQKITEPSP 248 +HS+G + I E +P Sbjct: 450 KTHSVGRKMILEIAP 464
>SBE2_YEAST (P42223) Protein SBE2| Length = 864 Score = 28.9 bits (63), Expect = 8.3 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Frame = -2 Query: 466 TSKLHTARAP-SSRSRGNAPIKWNASRVPASRYTSASAISSPIWRMESWQDAIRSTAAMA 290 TSKL + S+ + N P K++ + S YT + S P+ + S A ST Sbjct: 13 TSKLDPLKEEDSTHLKQNQPKKFSTKELMLSEYTERKSCSLPLSKSRSGSSASSSTTGSN 72 Query: 289 SHSLGPQK 266 ++G ++ Sbjct: 73 GKNIGTRR 80
>CU093_HUMAN (P59091) Protein C21orf93| Length = 139 Score = 28.9 bits (63), Expect = 8.3 Identities = 17/34 (50%), Positives = 19/34 (55%) Frame = +1 Query: 199 PASPLTHDPAASPGGVAGKVP*SSGDLGSETPWQ 300 PA H PAA+ GGV +V SS L E PWQ Sbjct: 18 PADAQLHGPAAAGGGVGPRVMLSS--LCREHPWQ 49 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,602,390 Number of Sequences: 219361 Number of extensions: 1348728 Number of successful extensions: 4727 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 4409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4724 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)