ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04g07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 5e-50
2gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
3gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 161 3e-36
6gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 1.7
7ref|XM_567859.1| Cryptococcus neoformans var. neoformans JEC21 m... 42 1.7
8emb|AL606506.11| Mouse DNA sequence from clone RP23-11A24 on chr... 42 1.7
9emb|AJ250923.1|HVO250923 Haloferax volcanii aceB gene for malate... 42 1.7
10gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin bios... 42 1.7
11ref|XM_478208.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.9
12gb|AE009139.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 6.9
13gb|BT011104.1| Drosophila melanogaster LP09056 full insert cDNA 40 6.9
14emb|AJ842444.1| Vibrio hepatarius partial partial recA pseudogen... 40 6.9
15emb|AJ842423.1| Vibrio fortis partial recA gene, strain R-15037 40 6.9
16gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete se... 40 6.9
17gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell ... 40 6.9
18gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswel... 40 6.9
19gb|AC023697.5| Drosophila melanogaster X BAC RP98-13N3 (Roswell ... 40 6.9
20gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete se... 40 6.9
21gb|AE011889.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.9
22ref|NM_169673.1| Drosophila melanogaster CG4699-RC, transcript v... 40 6.9
23ref|NM_169672.1| Drosophila melanogaster CG4699-RB, transcript v... 40 6.9
24ref|NM_142235.1| Drosophila melanogaster CG4699-RA, transcript v... 40 6.9
25gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 6.9
26gb|AC012097.8| Drosophila melanogaster, chromosome X, region 16F... 40 6.9
27emb|BX248389.8| Zebrafish DNA sequence from clone CH211-236C4 in... 40 6.9
28gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, r... 40 6.9
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
30dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
31gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.9
32gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, r... 40 6.9
33ref|XM_223094.3| PREDICTED: Rattus norvegicus similar to 60S rib... 40 6.9
34dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
35gb|AY104851.1| Zea mays PCO129785 mRNA sequence 40 6.9
36gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, r... 40 6.9
37gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48... 40 6.9
38gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 ... 40 6.9
39gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17... 40 6.9
40gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 6.9
41gb|AC175116.2| Mus musculus BAC clone RP23-396H16 from chromosom... 40 6.9
42gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
43emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa... 40 6.9
44emb|CR954198.2| Medicago truncatula chromosome 5 clone mte1-67f2... 40 6.9
45gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome... 40 6.9 
>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
           insert sequence
          Length = 3521

 Score =  206 bits (104), Expect = 5e-50
 Identities = 171/192 (89%), Gaps = 1/192 (0%)
 Strand = Plus / Plus

                                                                       
Query: 301 cggtggatcttatcgcgtcctgccaagactccatccgccagattggagatgagattgcag 360
           |||||||||| |||||  ||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 222 cggtggatctgatcgccgcctgcctcgactccatccgccagattggagatgagattgcag 281

                                                                       
Query: 361 atgcactagtgtacctagatgcaggcactctggaggcgttccactttataggagcattcc 420
           |||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||
Sbjct: 282 atgcactagtgtaccttgatgcaggcactctggaggcgtttcagtttattggagctttcc 341

                                                                       
Query: 421 ctctgcttcttgagcttggcgctcgtgcggtgtgcagcttgga-agtacgtctcctcttg 479
           |  |||||||||||||||| ||||||||  | ||||||||||| | | | ||||| ||||
Sbjct: 342 ccttgcttcttgagcttggtgctcgtgcaatttgcagcttggagaatgcatctccgcttg 401

                       
Query: 480 atgctgctgctg 491
           ||||||||||||
Sbjct: 402 atgctgctgctg 413



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 80  gcatctccggcgagctgcagcgccgaa 106
           ||||||||||||||| |||||||||||
Sbjct: 57  gcatctccggcgagcggcagcgccgaa 83
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score =  161 bits (81), Expect = 3e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                        
Query: 339  cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1378 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 1319

                                                                        
Query: 399  ttccactttataggagcattccctctgcttcttgagcttggcgctcgtgcggtgtgcagc 458
            || || ||||| ||||| |||||  |||||||||||||||| ||||||||  | ||||||
Sbjct: 1318 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 1259

                 
Query: 459  ttgga 463
            |||||
Sbjct: 1258 ttgga 1254



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 80   gcatctccggcgagctgcagcgccgaa 106
            ||||||||||||||| |||||||||||
Sbjct: 2083 gcatctccggcgagcggcagcgccgaa 2057



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 301  cggtggatcttatcgcgtcctgccaagactccatccgccag 341
            |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 1918 cggtggatctgatcgccgcctgcctcgactccatccgccag 1878
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23
              map near R10571S, complete sequence
          Length = 161073

 Score =  161 bits (81), Expect = 3e-36
 Identities = 114/125 (91%)
 Strand = Plus / Minus

                                                                          
Query: 339    cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
              |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 100687 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 100628

                                                                          
Query: 399    ttccactttataggagcattccctctgcttcttgagcttggcgctcgtgcggtgtgcagc 458
              || || ||||| ||||| |||||  |||||||||||||||| ||||||||  | ||||||
Sbjct: 100627 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 100568

                   
Query: 459    ttgga 463
              |||||
Sbjct: 100567 ttgga 100563



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 80     gcatctccggcgagctgcagcgccgaa 106
              ||||||||||||||| |||||||||||
Sbjct: 101392 gcatctccggcgagcggcagcgccgaa 101366



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 301    cggtggatcttatcgcgtcctgccaagactccatccgccag 341
              |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 101227 cggtggatctgatcgccgcctgcctcgactccatccgccag 101187
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  161 bits (81), Expect = 3e-36
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                           
Query: 339     cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3313607 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 3313666

                                                                           
Query: 399     ttccactttataggagcattccctctgcttcttgagcttggcgctcgtgcggtgtgcagc 458
               || || ||||| ||||| |||||  |||||||||||||||| ||||||||  | ||||||
Sbjct: 3313667 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 3313726

                    
Query: 459     ttgga 463
               |||||
Sbjct: 3313727 ttgga 3313731



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 80      gcatctccggcgagctgcagcgccgaa 106
               ||||||||||||||| |||||||||||
Sbjct: 3312902 gcatctccggcgagcggcagcgccgaa 3312928



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 301     cggtggatcttatcgcgtcctgccaagactccatccgccag 341
               |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 3313067 cggtggatctgatcgccgcctgcctcgactccatccgccag 3313107
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  161 bits (81), Expect = 3e-36
 Identities = 114/125 (91%)
 Strand = Plus / Plus

                                                                           
Query: 339     cagattggagatgagattgcagatgcactagtgtacctagatgcaggcactctggaggcg 398
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 3322312 cagattggagatgagattgcagatgcactagtgtaccttgatgcaggcactctggaggcg 3322371

                                                                           
Query: 399     ttccactttataggagcattccctctgcttcttgagcttggcgctcgtgcggtgtgcagc 458
               || || ||||| ||||| |||||  |||||||||||||||| ||||||||  | ||||||
Sbjct: 3322372 tttcagtttattggagctttccccttgcttcttgagcttggtgctcgtgcaatttgcagc 3322431

                    
Query: 459     ttgga 463
               |||||
Sbjct: 3322432 ttgga 3322436



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 80      gcatctccggcgagctgcagcgccgaa 106
               ||||||||||||||| |||||||||||
Sbjct: 3321607 gcatctccggcgagcggcagcgccgaa 3321633



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 301     cggtggatcttatcgcgtcctgccaagactccatccgccag 341
               |||||||||| |||||  ||||||  |||||||||||||||
Sbjct: 3321772 cggtggatctgatcgccgcctgcctcgactccatccgccag 3321812
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 471    ctcctcttgatgctgctgctg 491
              |||||||||||||||||||||
Sbjct: 750095 ctcctcttgatgctgctgctg 750075
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>ref|XM_567859.1| Cryptococcus neoformans var. neoformans JEC21 mismatch
           repair-related protein (CNK02590) partial mRNA
          Length = 3724

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 471 ctcctcttgatgctgctgctg 491
           |||||||||||||||||||||
Sbjct: 200 ctcctcttgatgctgctgctg 180
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>emb|AL606506.11| Mouse DNA sequence from clone RP23-11A24 on chromosome 11 Contains a
              novel pseudogene and two CpG islands, complete sequence
          Length = 213971

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 471    ctcctcttgatgctgctgctg 491
              |||||||||||||||||||||
Sbjct: 148834 ctcctcttgatgctgctgctg 148854
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>emb|AJ250923.1|HVO250923 Haloferax volcanii aceB gene for malate synthase
          Length = 1302

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 137 cttcggcgggagcggcgaggt 157
           |||||||||||||||||||||
Sbjct: 825 cttcggcgggagcggcgaggt 805
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>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
            complete sequence
          Length = 55972

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 141  ggcgggagcggcgaggtctccgtgt 165
            ||||||||||| |||||||||||||
Sbjct: 8800 ggcgggagcggggaggtctccgtgt 8776
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>ref|XM_478208.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 801

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 115 ccgcctctccctcgcctcccccct 138
           ||||||||||||| ||||||||||
Sbjct: 605 ccgcctctccctctcctcccccct 628
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>gb|AE009139.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 165
            of 256 of the complete sequence
          Length = 10153

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  tggtatccgcctctccctcg 128
            ||||||||||||||||||||
Sbjct: 5529 tggtatccgcctctccctcg 5510
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>gb|BT011104.1| Drosophila melanogaster LP09056 full insert cDNA
          Length = 4249

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  tgctgctgctgtgtggaatt 500
            ||||||||||||||||||||
Sbjct: 1610 tgctgctgctgtgtggaatt 1591
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>emb|AJ842444.1| Vibrio hepatarius partial partial recA pseudogene, strain LMG
           20362T
          Length = 1157

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tgagattgcagatgcactag 369
           ||||||||||||||||||||
Sbjct: 708 tgagattgcagatgcactag 727
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>emb|AJ842423.1| Vibrio fortis partial recA gene, strain R-15037
          Length = 797

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 350 tgagattgcagatgcactag 369
           ||||||||||||||||||||
Sbjct: 307 tgagattgcagatgcactag 326
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>gb|AC137702.18| Medicago truncatula clone mth2-7k10, complete sequence
          Length = 94750

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 tgctgctgctgtgtggaatt 500
           ||||||||||||||||||||
Sbjct: 171 tgctgctgctgtgtggaatt 190
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>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 155615

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   cttgatgctgctgctgtgtg 495
             ||||||||||||||||||||
Sbjct: 99330 cttgatgctgctgctgtgtg 99311
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>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 157739

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   cttgatgctgctgctgtgtg 495
             ||||||||||||||||||||
Sbjct: 84872 cttgatgctgctgctgtgtg 84853
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>gb|AC023697.5| Drosophila melanogaster X BAC RP98-13N3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 171751

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 474   ctcttgatgctgctgctgtg 493
             ||||||||||||||||||||
Sbjct: 75650 ctcttgatgctgctgctgtg 75631
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>gb|AC148756.2| Medicago truncatula clone mth2-22d18, complete sequence
          Length = 107160

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    tgctgctgctgtgtggaatt 500
              ||||||||||||||||||||
Sbjct: 105153 tgctgctgctgtgtggaatt 105134
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>gb|AE011889.1| Xanthomonas axonopodis pv. citri str. 306,  section 267 of 469 of the
            complete genome
          Length = 10542

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 424  tgcttcttgagcttggcgctcgtg 447
            |||||||||||| |||||||||||
Sbjct: 5696 tgcttcttgagcctggcgctcgtg 5719
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>ref|NM_169673.1| Drosophila melanogaster CG4699-RC, transcript variant C (CG4699),
            mRNA
          Length = 5764

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  tgctgctgctgtgtggaatt 500
            ||||||||||||||||||||
Sbjct: 3126 tgctgctgctgtgtggaatt 3107
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>ref|NM_169672.1| Drosophila melanogaster CG4699-RB, transcript variant B (CG4699),
            mRNA
          Length = 5966

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  tgctgctgctgtgtggaatt 500
            ||||||||||||||||||||
Sbjct: 3328 tgctgctgctgtgtggaatt 3309
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>ref|NM_142235.1| Drosophila melanogaster CG4699-RA, transcript variant A (CG4699),
            mRNA
          Length = 5870

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  tgctgctgctgtgtggaatt 500
            ||||||||||||||||||||
Sbjct: 3232 tgctgctgctgtgtggaatt 3213
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 109     tggtatccgcctctccctcg 128
               ||||||||||||||||||||
Sbjct: 1829363 tggtatccgcctctccctcg 1829344
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>gb|AC012097.8| Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
             BACR29H04, complete sequence
          Length = 155670

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   aggcggcgtcgcggggaagg 256
             ||||||||||||||||||||
Sbjct: 24550 aggcggcgtcgcggggaagg 24531
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>emb|BX248389.8| Zebrafish DNA sequence from clone CH211-236C4 in linkage group 7,
              complete sequence
          Length = 134182

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 471    ctcctcttgatgctgctgctgtgt 494
              ||||||||| ||||||||||||||
Sbjct: 107038 ctcctcttgctgctgctgctgtgt 107061
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>gb|AC012163.13|AC012163 Drosophila melanogaster, chromosome X, region 16F-16F, BAC clone
             BACR17D02, complete sequence
          Length = 186748

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aggcggcgtcgcggggaagg 256
             ||||||||||||||||||||
Sbjct: 88064 aggcggcgtcgcggggaagg 88083
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      ccgcctctccctcgcctccc 134
                ||||||||||||||||||||
Sbjct: 14565261 ccgcctctccctcgcctccc 14565280
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 115      ccgcctctccctcgcctcccccct 138
                ||||||||||||| ||||||||||
Sbjct: 18463040 ccgcctctccctctcctcccccct 18463063
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 88      ggcgagctgcagcgccgaag 107
               ||||||||||||||||||||
Sbjct: 2671030 ggcgagctgcagcgccgaag 2671049
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>gb|AC010122.7|AC010122 Drosophila melanogaster, chromosome 3R, region 89A-89A, BAC clone
             BACR06B08, complete sequence
          Length = 151447

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   tgctgctgctgtgtggaatt 500
             ||||||||||||||||||||
Sbjct: 43095 tgctgctgctgtgtggaatt 43076
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>ref|XM_223094.3| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9
           (LOC305087), mRNA
          Length = 801

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 tccctctgcttcttgagctt 437
           ||||||||||||||||||||
Sbjct: 108 tccctctgcttcttgagctt 89
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 115   ccgcctctccctcgcctcccccct 138
             ||||||||||||| ||||||||||
Sbjct: 54888 ccgcctctccctctcctcccccct 54911
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>gb|AY104851.1| Zea mays PCO129785 mRNA sequence
          Length = 672

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 ctgcttcttgagcttggcgc 442
           ||||||||||||||||||||
Sbjct: 109 ctgcttcttgagcttggcgc 90
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>gb|AC006414.6|AC006414 Drosophila melanogaster, chromosome 3R, region 89A1-89A5, BAC clone
              BACR48G17, complete sequence
          Length = 179122

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    tgctgctgctgtgtggaatt 500
              ||||||||||||||||||||
Sbjct: 154108 tgctgctgctgtgtggaatt 154089
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>gb|AE003710.2| Drosophila melanogaster chromosome 3R, section 48 of 118 of the complete
              sequence
          Length = 224071

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    tgctgctgctgtgtggaatt 500
              ||||||||||||||||||||
Sbjct: 143338 tgctgctgctgtgtggaatt 143319
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>gb|AE003507.3| Drosophila melanogaster chromosome X, section 59 of 74 of the complete
              sequence
          Length = 299804

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    aggcggcgtcgcggggaagg 256
              ||||||||||||||||||||
Sbjct: 143237 aggcggcgtcgcggggaagg 143256
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>gb|AE003483.4| Drosophila melanogaster chromosome 3L, section 17 of 83 of the complete
             sequence
          Length = 175890

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   cttgatgctgctgctgtgtg 495
             ||||||||||||||||||||
Sbjct: 85638 cttgatgctgctgctgtgtg 85619
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
              sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 474    ctcttgatgctgctgctgtg 493
              ||||||||||||||||||||
Sbjct: 300256 ctcttgatgctgctgctgtg 300237
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>gb|AC175116.2| Mus musculus BAC clone RP23-396H16 from chromosome 5, complete sequence
          Length = 210409

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    tgctgctgctgtgtggaatt 500
              ||||||||||||||||||||
Sbjct: 206520 tgctgctgctgtgtggaatt 206501
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 115      ccgcctctccctcgcctccc 134
                ||||||||||||||||||||
Sbjct: 14519545 ccgcctctccctcgcctccc 14519564
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>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   ccgcctctccctcgcctccc 134
             ||||||||||||||||||||
Sbjct: 96032 ccgcctctccctcgcctccc 96013
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>emb|CR954198.2| Medicago truncatula chromosome 5 clone mte1-67f21, COMPLETE SEQUENCE
          Length = 101335

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 481   tgctgctgctgtgtggaatt 500
             ||||||||||||||||||||
Sbjct: 78372 tgctgctgctgtgtggaatt 78391
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>gb|AC171500.2| Mus musculus BAC clone RP24-67A10 from chromosome 5, complete
            sequence
          Length = 185497

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 481  tgctgctgctgtgtggaatt 500
            ||||||||||||||||||||
Sbjct: 8625 tgctgctgctgtgtggaatt 8606


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,865,107
Number of Sequences: 3902068
Number of extensions: 3865107
Number of successful extensions: 73658
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73352
Number of HSP's gapped (non-prelim): 305
length of query: 506
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 484
effective length of database: 17,147,199,772
effective search space: 8299244689648
effective search space used: 8299244689648
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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