ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
2dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
3dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic D... 178 1e-41
4ref|XM_471091.1| Oryza sativa (japonica cultivar-group), predic... 46 0.098
5emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4,... 46 0.098
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.098
7gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 44 0.39
8gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 44 0.39
9ref|XM_527644.1| PREDICTED: Pan troglodytes eukaryotic translati... 42 1.5
10gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.5
11gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.5
12gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 42 1.5
13gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete... 42 1.5
14gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 6.0
15ref|XM_482679.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
16ref|XM_466967.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.0
17ref|NM_190336.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
18ref|NM_190335.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
19gb|AY644470.1| Homo sapiens interferon gamma receptor 2 (interfe... 40 6.0
20ref|XM_390114.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 6.0
21gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.0
22gb|DQ100334.1| Eucalyptus globulus putative beta-expansin (EXPB1... 40 6.0
23dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
24dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 6.0
25gb|AC073882.4| Mus musculus strain 129/SvES Cell Line CJ7 chromo... 40 6.0
26gb|AC068952.10| Mus musculus strain 129/Sv ES cell line CJ7 chro... 40 6.0
27gb|AC068903.11| Mus musculus strain 129/Sv ES cell line CJ7 chro... 40 6.0
28dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
29dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
30dbj|AP000045.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 6.0
31gb|AC093496.2| Homo sapiens chromosome 3 clone RP11-536I6 map 3p... 40 6.0
32gb|AC090941.2| Homo sapiens chromosome 3 clone RP11-16L19 map 3p... 40 6.0
33dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chr... 40 6.0
35dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
36dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
37dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.0
38emb|BX537378.1|HSM805673 Homo sapiens mRNA; cDNA DKFZp686C2482 (... 40 6.0
39emb|BX088557.2| Mouse DNA sequence from clone RP23-173C23 on chr... 40 6.0
40dbj|AP000189.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 6.0
41dbj|AP000300.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 6.0
42dbj|AP000113.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 6.0 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Plus

                                                                            
Query: 271      ggctcgcgcccgcagctcgacctcagcggcgccgccatccacggcaccctcgaggaccgc 330
                |||||||| |||||||| |||||||||||||| || |||||||||| ||| |||||||||
Sbjct: 20627415 ggctcgcggccgcagctggacctcagcggcgcggcgatccacggcaacctggaggaccgc 20627474

                                                                            
Query: 331      aaccccaccatcctgctgcccaaccagtccgacgacatctcccacctcgccctcgacatc 390
                ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 20627475 aacccgaccatcctgctgcctaaccagtccgacgacatctcccacctcgccctcgacatc 20627534

                  
Query: 391      gg 392
                ||
Sbjct: 20627535 gg 20627536



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 65       ggcaggtgggcggttggtggcggc 88
                ||||||||||||||||||||||||
Sbjct: 20627217 ggcaggtgggcggttggtggcggc 20627240
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>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1112_E07
          Length = 132055

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Plus

                                                                         
Query: 271   ggctcgcgcccgcagctcgacctcagcggcgccgccatccacggcaccctcgaggaccgc 330
             |||||||| |||||||| |||||||||||||| || |||||||||| ||| |||||||||
Sbjct: 21026 ggctcgcggccgcagctggacctcagcggcgcggcgatccacggcaacctggaggaccgc 21085

                                                                         
Query: 331   aaccccaccatcctgctgcccaaccagtccgacgacatctcccacctcgccctcgacatc 390
             ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 21086 aacccgaccatcctgctgcctaaccagtccgacgacatctcccacctcgccctcgacatc 21145

               
Query: 391   gg 392
             ||
Sbjct: 21146 gg 21147



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 65    ggcaggtgggcggttggtggcggc 88
             ||||||||||||||||||||||||
Sbjct: 20828 ggcaggtgggcggttggtggcggc 20851
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>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0515E01
          Length = 140063

 Score =  178 bits (90), Expect = 1e-41
 Identities = 114/122 (93%)
 Strand = Plus / Plus

                                                                         
Query: 271   ggctcgcgcccgcagctcgacctcagcggcgccgccatccacggcaccctcgaggaccgc 330
             |||||||| |||||||| |||||||||||||| || |||||||||| ||| |||||||||
Sbjct: 93073 ggctcgcggccgcagctggacctcagcggcgcggcgatccacggcaacctggaggaccgc 93132

                                                                         
Query: 331   aaccccaccatcctgctgcccaaccagtccgacgacatctcccacctcgccctcgacatc 390
             ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 93133 aacccgaccatcctgctgcctaaccagtccgacgacatctcccacctcgccctcgacatc 93192

               
Query: 391   gg 392
             ||
Sbjct: 93193 gg 93194



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 65    ggcaggtgggcggttggtggcggc 88
             ||||||||||||||||||||||||
Sbjct: 92875 ggcaggtgggcggttggtggcggc 92898
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>ref|XM_471091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 201  cgagccggaggccaaggggaaggcgccggcg 231
            ||||| ||||||||||| |||||||||||||
Sbjct: 1191 cgagctggaggccaaggagaaggcgccggcg 1221
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>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete
              sequence
          Length = 152632

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 201    cgagccggaggccaaggggaaggcgccggcg 231
              ||||| ||||||||||| |||||||||||||
Sbjct: 113989 cgagctggaggccaaggagaaggcgccggcg 113959
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 201     cgagccggaggccaaggggaaggcgccggcg 231
               ||||| ||||||||||| |||||||||||||
Sbjct: 1454965 cgagctggaggccaaggagaaggcgccggcg 1454935
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 375     cctcgccctcgacatcggcggc 396
               ||||||||||||||||||||||
Sbjct: 1245687 cctcgccctcgacatcggcggc 1245708
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 375     cctcgccctcgacatcggcggc 396
               ||||||||||||||||||||||
Sbjct: 1666730 cctcgccctcgacatcggcggc 1666751
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>ref|XM_527644.1| PREDICTED: Pan troglodytes eukaryotic translation initiation factor
           3, subunit 9 eta, 116kDa (LOC472269), mRNA
          Length = 2319

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 359 ccgacgacatctcccacctcg 379
           |||||||||||||||||||||
Sbjct: 359 ccgacgacatctcccacctcg 339
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 258     gatgaaccgctccggctcgcgcccg 282
               ||||| |||||||||||||||||||
Sbjct: 4758682 gatgatccgctccggctcgcgcccg 4758706
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 377     tcgccctcgacatcggcggct 397
               |||||||||||||||||||||
Sbjct: 2819509 tcgccctcgacatcggcggct 2819489
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 258     gatgaaccgctccggctcgcgcccg 282
               ||||| |||||||||||||||||||
Sbjct: 5153977 gatgatccgctccggctcgcgcccg 5154001
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>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence
          Length = 412348

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 282   gcagctcgacctcagcggcgc 302
             |||||||||||||||||||||
Sbjct: 63242 gcagctcgacctcagcggcgc 63262
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 364    gacatctcccacctcgccctcgacatcggcgg 395
              |||||| ||||||||||||||| ||| |||||
Sbjct: 626231 gacatcgcccacctcgccctcggcatgggcgg 626200
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>ref|XM_482679.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 297

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 77 gttggtggcggcactgatcc 96
          ||||||||||||||||||||
Sbjct: 24 gttggtggcggcactgatcc 43
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>ref|XM_466967.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 tcgacctcagcggcgccgcc 306
           ||||||||||||||||||||
Sbjct: 401 tcgacctcagcggcgccgcc 420
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>ref|NM_190336.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 633

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 198 gcacgagccggaggccaaggggaaggcg 225
           |||||||||||||||  |||||||||||
Sbjct: 294 gcacgagccggaggcggaggggaaggcg 267
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>ref|NM_190335.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 378

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 198 gcacgagccggaggccaaggggaaggcg 225
           |||||||||||||||  |||||||||||
Sbjct: 286 gcacgagccggaggcggaggggaaggcg 313
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>gb|AY644470.1| Homo sapiens interferon gamma receptor 2 (interferon gamma transducer
             1) (IFNGR2) gene, complete cds
          Length = 38374

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 38371 ccaccatcctgctgcccaac 38352
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>ref|XM_390114.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG09938.1)
           partial mRNA
          Length = 1740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 3   cgatcgattccgtttttgtc 22
           ||||||||||||||||||||
Sbjct: 965 cgatcgattccgtttttgtc 946
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>gb|AC167968.5| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940121D9, complete sequence
          Length = 108830

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 293   tcagcggcgccgccatccacggca 316
             |||||| |||||||||||||||||
Sbjct: 63849 tcagcgccgccgccatccacggca 63826
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>gb|DQ100334.1| Eucalyptus globulus putative beta-expansin (EXPB1) mRNA, partial
           cds
          Length = 979

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 tcgacctcagcggcgccgcc 306
           ||||||||||||||||||||
Sbjct: 206 tcgacctcagcggcgccgcc 225
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>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1065G12
          Length = 165006

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 198    gcacgagccggaggccaaggggaaggcg 225
              |||||||||||||||  |||||||||||
Sbjct: 140712 gcacgagccggaggcggaggggaaggcg 140685



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 198    gcacgagccggaggccaaggggaaggcg 225
              |||||||||||||||  |||||||||||
Sbjct: 140028 gcacgagccggaggcggaggggaaggcg 140055
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 300     cgccgccatccacggcaccc 319
               ||||||||||||||||||||
Sbjct: 4466222 cgccgccatccacggcaccc 4466241
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>gb|AC073882.4| Mus musculus strain 129/SvES Cell Line CJ7 chromosome 2 clone
             ct7-305f12, complete sequence
          Length = 130734

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   tcaaatccactggcctggaa 145
             ||||||||||||||||||||
Sbjct: 90191 tcaaatccactggcctggaa 90172
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>gb|AC068952.10| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone
             ct7-254f1, complete sequence
          Length = 95292

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tcaaatccactggcctggaa 145
             ||||||||||||||||||||
Sbjct: 51538 tcaaatccactggcctggaa 51557
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>gb|AC068903.11| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 2 clone
             ct7-196d19, complete sequence
          Length = 82033

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tcaaatccactggcctggaa 145
             ||||||||||||||||||||
Sbjct: 36759 tcaaatccactggcctggaa 36778
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 287      tcgacctcagcggcgccgcc 306
                ||||||||||||||||||||
Sbjct: 25672703 tcgacctcagcggcgccgcc 25672722
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 198      gcacgagccggaggccaaggggaaggcg 225
                |||||||||||||||  |||||||||||
Sbjct: 39339006 gcacgagccggaggcggaggggaaggcg 39338979



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 198      gcacgagccggaggccaaggggaaggcg 225
                |||||||||||||||  |||||||||||
Sbjct: 39338322 gcacgagccggaggcggaggggaaggcg 39338349
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>dbj|AP000045.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 16/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 61079 ccaccatcctgctgcccaac 61060
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>gb|AC093496.2| Homo sapiens chromosome 3 clone RP11-536I6 map 3p, complete sequence
          Length = 184041

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   caaccccaccatcctgctgc 349
             ||||||||||||||||||||
Sbjct: 94706 caaccccaccatcctgctgc 94725
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>gb|AC090941.2| Homo sapiens chromosome 3 clone RP11-16L19 map 3p, complete sequence
          Length = 187159

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    caaccccaccatcctgctgc 349
              ||||||||||||||||||||
Sbjct: 178887 caaccccaccatcctgctgc 178906
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>dbj|AP006757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0551C06
          Length = 149829

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 198    gcacgagccggaggccaaggggaaggcg 225
              |||||||||||||||  |||||||||||
Sbjct: 120252 gcacgagccggaggcggaggggaaggcg 120225



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 198    gcacgagccggaggccaaggggaaggcg 225
              |||||||||||||||  |||||||||||
Sbjct: 119568 gcacgagccggaggcggaggggaaggcg 119595
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>emb|BX649317.5| Mouse DNA sequence from clone RP23-415G15 on chromosome 2, complete
             sequence
          Length = 199584

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   tcaaatccactggcctggaa 145
             ||||||||||||||||||||
Sbjct: 47737 tcaaatccactggcctggaa 47756
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>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014E22
          Length = 157627

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    tcgacctcagcggcgccgcc 306
              ||||||||||||||||||||
Sbjct: 142750 tcgacctcagcggcgccgcc 142769
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>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 287   tcgacctcagcggcgccgcc 306
             ||||||||||||||||||||
Sbjct: 75379 tcgacctcagcggcgccgcc 75398
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>dbj|AP001717.1| Homo sapiens genomic DNA, chromosome 21q, section 61/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 48229 ccaccatcctgctgcccaac 48210
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>emb|BX537378.1|HSM805673 Homo sapiens mRNA; cDNA DKFZp686C2482 (from clone DKFZp686C2482);
            complete cds
          Length = 3084

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 335  ccaccatcctgctgcccaac 354
            ||||||||||||||||||||
Sbjct: 2687 ccaccatcctgctgcccaac 2706
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>emb|BX088557.2| Mouse DNA sequence from clone RP23-173C23 on chromosome 2, complete
            sequence
          Length = 80320

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  tcaaatccactggcctggaa 145
            ||||||||||||||||||||
Sbjct: 9846 tcaaatccactggcctggaa 9865
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>dbj|AP000189.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 16/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 67055 ccaccatcctgctgcccaac 67036
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>dbj|AP000300.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:PACB5, complete sequence
          Length = 56188

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 33847 ccaccatcctgctgcccaac 33828
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>dbj|AP000113.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 16/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 335   ccaccatcctgctgcccaac 354
             ||||||||||||||||||||
Sbjct: 67055 ccaccatcctgctgcccaac 67036


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,573,248
Number of Sequences: 3902068
Number of extensions: 2573248
Number of successful extensions: 51042
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50474
Number of HSP's gapped (non-prelim): 568
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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