ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_473069.1| Oryza sativa (japonica cultivar-group), predic... 396 e-107
2emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 396 e-107
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 396 e-107
4dbj|AK066572.1| Oryza sativa (japonica cultivar-group) cDNA clon... 396 e-107
5gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosom... 46 0.083
6gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, c... 44 0.33
7gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.33
8gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.33
9gb|AC149645.4| Bos taurus BAC CH240-50L4 (Children's Hospital O... 42 1.3
10gb|AC147260.3| Mus musculus BAC clone RP24-186L11 from chromosom... 42 1.3
11gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosom... 42 1.3
12gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosom... 42 1.3
13gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome... 42 1.3
14gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome... 42 1.3
15gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome... 42 1.3
16emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
17gb|AC115695.11| Mus musculus chromosome 5, clone RP24-229D18, co... 42 1.3
18gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosom... 42 1.3
19gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.3
20gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complet... 42 1.3
21gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 5.1
22gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
23gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
24gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.1
25gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
26ref|XM_362883.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 5.1
27gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 40 5.1
28gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 5.1
29gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.1
30gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, com... 40 5.1
31gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole b... 40 5.1
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.1
33ref|XM_542301.2| PREDICTED: Canis familiaris similar to wingless... 40 5.1
34gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
35gb|AF547430.1| Mycobacteriophage PG1, complete genome 40 5.1
36gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
37emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on ch... 40 5.1
38emb|AL355353.23| Human DNA sequence from clone RP11-385F7 on chr... 40 5.1
39emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416... 40 5.1
40gb|CP000088.1| Thermobifida fusca YX, complete genome 40 5.1
41emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.1
42emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 5.1
43emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4,... 40 5.1
44gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, comp... 40 5.1
45dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 5.1
46gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 5.1
47gb|AE012335.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 5.1
48dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g... 40 5.1
49dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, ... 40 5.1
50gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genom... 40 5.1
51gb|AY667408.1| Escherichia coli O86:H2 O-antigen gene cluster, c... 40 5.1
52gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosom... 40 5.1
53gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
54gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
55gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 5.1
56gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.1
57dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
58dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
59dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
60dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
61dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
62gb|AY012189.1| Escherichia coli isolate M1182 GDP-mannose pyroph... 40 5.1
63dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
64gb|AC098820.3| Homo sapiens BAC clone RP11-253L15 from 2, comple... 40 5.1
65dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
66dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
67dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.1
68dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.1
69dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
70gb|AY670704.1| Escherichia coli O86 O-antigen gene cluster, comp... 40 5.1
71dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
72emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 i... 40 5.1
73gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 5.1
74gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.1
75gb|DQ011534.1| Escherichia fergusonii strain EC2781b serotype O1... 40 5.1
76gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 5.1
77gb|AF061251.1|AF061251 Eschericia coli serotype O157:H7 O antige... 40 5.1
78gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.1
79emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC... 40 5.1
80gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 5.1
81gb|AC153524.3| Mus musculus 10 BAC RP23-349H12 (Roswell Park Can... 40 5.1
82gb|AY220982.1| Escherichia coli O86:B7 O-antigen gene cluster, c... 40 5.1
83dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.1
84dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 5.1
85gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome 40 5.1
86dbj|AB008676.1| Escherichia coli 0157 DNA, map position at 46 mi... 40 5.1 
>ref|XM_473069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3564

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggagcccgggctgagcatcgagtccgggtcggccatccgggtggcagtgctgccggtg 169
           |||||||||||  |||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 1   atggagcccggcgtgagcatcgagtccgggtcggcgatccgcgtggcggtgctgccggtg 60

                                                                       
Query: 170 ggcgggccgatcccgccgcagtgcctgcgggactacgcggcgctggtggcgcggcacgcg 229
           |||||||||||| |||||  | |||| || ||||||||||||||||||||||||||||||
Sbjct: 61  ggcgggccgatctcgccggcgcgcctccgcgactacgcggcgctggtggcgcggcacgcg 120

                                                                       
Query: 230 cgcgtcgacctcgcctcgctgcgcccctactactcggagcaccagaagagccccttcgcg 289
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgcgtcgacctcgcctcgctgcggccctactactcggagcaccagaagagccccttcgcg 180

                                                                       
Query: 290 caccagccctgggacacgggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 349
           |||||||| |||| |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caccagccgtggggcggcggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 240

                                               
Query: 350 tcgccctgggaggacttccagtcctcgcgcaaggtg 385
           ||||| |||||||||||||||||||| |||||||||
Sbjct: 241 tcgccgtgggaggacttccagtcctcccgcaaggtg 276
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
              complete sequence
          Length = 173171

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                          
Query: 110    atggagcccgggctgagcatcgagtccgggtcggccatccgggtggcagtgctgccggtg 169
              |||||||||||  |||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 163522 atggagcccggcgtgagcatcgagtccgggtcggcgatccgcgtggcggtgctgccggtg 163581

                                                                          
Query: 170    ggcgggccgatcccgccgcagtgcctgcgggactacgcggcgctggtggcgcggcacgcg 229
              |||||||||||| |||||  | |||| || ||||||||||||||||||||||||||||||
Sbjct: 163582 ggcgggccgatctcgccggcgcgcctccgcgactacgcggcgctggtggcgcggcacgcg 163641

                                                                          
Query: 230    cgcgtcgacctcgcctcgctgcgcccctactactcggagcaccagaagagccccttcgcg 289
              ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 163642 cgcgtcgacctcgcctcgctgcggccctactactcggagcaccagaagagccccttcgcg 163701

                                                                          
Query: 290    caccagccctgggacacgggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 349
              |||||||| |||| |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163702 caccagccgtggggcggcggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 163761

                                                  
Query: 350    tcgccctgggaggacttccagtcctcgcgcaaggtg 385
              ||||| |||||||||||||||||||| |||||||||
Sbjct: 163762 tcgccgtgggaggacttccagtcctcccgcaaggtg 163797
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                            
Query: 110      atggagcccgggctgagcatcgagtccgggtcggccatccgggtggcagtgctgccggtg 169
                |||||||||||  |||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 25042937 atggagcccggcgtgagcatcgagtccgggtcggcgatccgcgtggcggtgctgccggtg 25042996

                                                                            
Query: 170      ggcgggccgatcccgccgcagtgcctgcgggactacgcggcgctggtggcgcggcacgcg 229
                |||||||||||| |||||  | |||| || ||||||||||||||||||||||||||||||
Sbjct: 25042997 ggcgggccgatctcgccggcgcgcctccgcgactacgcggcgctggtggcgcggcacgcg 25043056

                                                                            
Query: 230      cgcgtcgacctcgcctcgctgcgcccctactactcggagcaccagaagagccccttcgcg 289
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 25043057 cgcgtcgacctcgcctcgctgcggccctactactcggagcaccagaagagccccttcgcg 25043116

                                                                            
Query: 290      caccagccctgggacacgggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 349
                |||||||| |||| |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25043117 caccagccgtggggcggcggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 25043176

                                                    
Query: 350      tcgccctgggaggacttccagtcctcgcgcaaggtg 385
                ||||| |||||||||||||||||||| |||||||||
Sbjct: 25043177 tcgccgtgggaggacttccagtcctcccgcaaggtg 25043212



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 32      ttctgttcccttctccacct 51
               ||||||||||||||||||||
Sbjct: 8200740 ttctgttcccttctccacct 8200721
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>dbj|AK066572.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070O10, full
           insert sequence
          Length = 3811

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                       
Query: 110 atggagcccgggctgagcatcgagtccgggtcggccatccgggtggcagtgctgccggtg 169
           |||||||||||  |||||||||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 69  atggagcccggcgtgagcatcgagtccgggtcggcgatccgcgtggcggtgctgccggtg 128

                                                                       
Query: 170 ggcgggccgatcccgccgcagtgcctgcgggactacgcggcgctggtggcgcggcacgcg 229
           |||||||||||| |||||  | |||| || ||||||||||||||||||||||||||||||
Sbjct: 129 ggcgggccgatctcgccggcgcgcctccgcgactacgcggcgctggtggcgcggcacgcg 188

                                                                       
Query: 230 cgcgtcgacctcgcctcgctgcgcccctactactcggagcaccagaagagccccttcgcg 289
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 189 cgcgtcgacctcgcctcgctgcggccctactactcggagcaccagaagagccccttcgcg 248

                                                                       
Query: 290 caccagccctgggacacgggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 349
           |||||||| |||| |   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caccagccgtggggcggcggctgcctccgcctcaagttcgtgctcggcggctgcgtgccc 308

                                               
Query: 350 tcgccctgggaggacttccagtcctcgcgcaaggtg 385
           ||||| |||||||||||||||||||| |||||||||
Sbjct: 309 tcgccgtgggaggacttccagtcctcccgcaaggtg 344
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>gb|AC127341.3| Mus musculus BAC clone RP23-189L19 from chromosome 17, complete
             sequence
          Length = 213609

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 33    tctgttcccttctccacctcccc 55
             |||||||||||||||||||||||
Sbjct: 36571 tctgttcccttctccacctcccc 36593
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>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence
          Length = 1212674

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 206    gcggcgctggtggcgcggcacg 227
              ||||||||||||||||||||||
Sbjct: 938541 gcggcgctggtggcgcggcacg 938520



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 206    gcggcgctggtggcgcggcacg 227
              ||||||||||||||||||||||
Sbjct: 934517 gcggcgctggtggcgcggcacg 934496



 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 206    gcggcgctggtggcgcggcacg 227
              ||||||||||||||||||||||
Sbjct: 931465 gcggcgctggtggcgcggcacg 931444
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 194     ctgcgggactacgcggcgctgg 215
               ||||||||||||||||||||||
Sbjct: 2205214 ctgcgggactacgcggcgctgg 2205235
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 204     acgcggcgctggtggcgcggca 225
               ||||||||||||||||||||||
Sbjct: 4654396 acgcggcgctggtggcgcggca 4654375



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     cctcgcctcgctgcgcccct 257
               ||||||||||||||||||||
Sbjct: 4363343 cctcgcctcgctgcgcccct 4363324
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>gb|AC149645.4| Bos taurus  BAC CH240-50L4 (Children's Hospital Oakland Research
           Institute Bovine BAC Library (male)) complete sequence
          Length = 198061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 30  atttctgttcccttctccacc 50
           |||||||||||||||||||||
Sbjct: 198 atttctgttcccttctccacc 178
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>gb|AC147260.3| Mus musculus BAC clone RP24-186L11 from chromosome Y, complete sequence
          Length = 137361

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 82    tctcgagctctccccctccccctcc 106
             |||| ||||||||||||||||||||
Sbjct: 57417 tctccagctctccccctccccctcc 57441
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>gb|AC144651.2| Mus musculus BAC clone RP24-251O18 from chromosome Y, complete sequence
          Length = 144831

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 82     tctcgagctctccccctccccctcc 106
              |||| ||||||||||||||||||||
Sbjct: 118170 tctccagctctccccctccccctcc 118146
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>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence
          Length = 222469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tctcgagctctccccctccccctcc 106
             |||| ||||||||||||||||||||
Sbjct: 53489 tctccagctctccccctccccctcc 53465



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     agctctccccctccccctcc 106
              ||||||||||||||||||||
Sbjct: 220313 agctctccccctccccctcc 220294
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>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence
          Length = 222469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tctcgagctctccccctccccctcc 106
             |||| ||||||||||||||||||||
Sbjct: 53489 tctccagctctccccctccccctcc 53465



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     agctctccccctccccctcc 106
              ||||||||||||||||||||
Sbjct: 220313 agctctccccctccccctcc 220294
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>gb|AC130833.3| Mus musculus BAC clone RP24-91H16 from chromosome Y, complete sequence
          Length = 208378

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 82     tctcgagctctccccctccccctcc 106
              |||| ||||||||||||||||||||
Sbjct: 176048 tctccagctctccccctccccctcc 176024
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>gb|AC134852.4| Mus musculus BAC clone RP24-248B6 from chromosome Y, complete sequence
          Length = 186637

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 82     tctcgagctctccccctccccctcc 106
              |||| ||||||||||||||||||||
Sbjct: 150699 tctccagctctccccctccccctcc 150723
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 209     gcgctggtggcgcggcacgcgcgcg 233
               |||| ||||||||||||||||||||
Sbjct: 1725995 gcgccggtggcgcggcacgcgcgcg 1726019



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 220     gcggcacgcgcgcgtcgacctcgc 243
               ||||||||||||||||||| ||||
Sbjct: 3394000 gcggcacgcgcgcgtcgacgtcgc 3394023
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>gb|AC115695.11| Mus musculus chromosome 5, clone RP24-229D18, complete sequence
          Length = 161430

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     ctctccccctccccctccgca 109
              |||||||||||||||||||||
Sbjct: 115080 ctctccccctccccctccgca 115100
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>gb|AC141474.4| Mus musculus BAC clone RP24-192L11 from chromosome y, complete sequence
          Length = 178464

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tctcgagctctccccctccccctcc 106
             |||| ||||||||||||||||||||
Sbjct: 89130 tctccagctctccccctccccctcc 89106
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 334     cggcggctgcgtgccctcgccctgg 358
               ||||||||||||| |||||||||||
Sbjct: 1683888 cggcggctgcgtggcctcgccctgg 1683912
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>gb|AC140924.4| Mus musculus BAC clone RP24-249B5 from Y, complete sequence
          Length = 200241

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 82    tctcgagctctccccctccccctcc 106
             |||| ||||||||||||||||||||
Sbjct: 65592 tctccagctctccccctccccctcc 65568
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 1070977 ctctccccctccccctccgc 1070996
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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 35420 ctctccccctccccctccgc 35401



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 25334 ctctccccctccccctccgc 25315
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>gb|AC133291.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0542B04,
              complete sequence
          Length = 182823

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     ctctccccctccccctccgc 108
              ||||||||||||||||||||
Sbjct: 158096 ctctccccctccccctccgc 158115
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 220     gcggcacgcgcgcgtcgacctcgc 243
               ||||||||||||||||||| ||||
Sbjct: 2436146 gcggcacgcgcgcgtcgacgtcgc 2436169
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>gb|AC134053.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0005H02, complete sequence
          Length = 144882

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 73951 ctctccccctccccctccgc 73932
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>ref|XM_362883.1| Magnaporthe grisea 70-15 hypothetical protein (MG08554.4) partial
           cds
          Length = 1692

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 214 ggtggcgcggcacgcgcgcg 233
           ||||||||||||||||||||
Sbjct: 357 ggtggcgcggcacgcgcgcg 376
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>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 206   gcggcgctggtggcgcggcacgcgcgcg 233
             ||||||||||||||||||| ||| ||||
Sbjct: 81198 gcggcgctggtggcgcggctcgcccgcg 81171
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 227     gcgcgcgtcgacctcgcctcgctg 250
               ||||||||||||||||||| ||||
Sbjct: 3326398 gcgcgcgtcgacctcgcctggctg 3326375
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 220     gcggcacgcgcgcgtcgacctcgc 243
               ||||||||||||||||||| ||||
Sbjct: 3651292 gcggcacgcgcgcgtcgacgtcgc 3651315
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>gb|AC105169.9| Mus musculus chromosome 10, clone RP24-124K4, complete sequence
          Length = 167310

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     ttcccttctccacctccccg 56
              ||||||||||||||||||||
Sbjct: 153933 ttcccttctccacctccccg 153952
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>gb|DQ013294.1| Polyangium cellulosum strain So ce12 disorazole biosynthesis gene
             cluster, complete sequence
          Length = 84868

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ctacgcggcgctggtggcgc 221
             ||||||||||||||||||||
Sbjct: 73662 ctacgcggcgctggtggcgc 73681
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 206      gcggcgctggtggcgcggcacgcgcgcg 233
                ||||||||||||||||||| ||| ||||
Sbjct: 32429070 gcggcgctggtggcgcggctcgcccgcg 32429043



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 14811075 ctctccccctccccctccgc 14811094



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 6515272 ctctccccctccccctccgc 6515291
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>ref|XM_542301.2| PREDICTED: Canis familiaris similar to wingless-type MMTV
           integration site family, member 11 precursor
           (LOC485183), mRNA
          Length = 1084

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 213 tggtggcgcggcacgcgcgc 232
           ||||||||||||||||||||
Sbjct: 20  tggtggcgcggcacgcgcgc 1
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 58034 ctctccccctccccctccgc 58053
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>gb|AF547430.1| Mycobacteriophage PG1, complete genome
          Length = 68999

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 322   caagttcgtgctcggcggct 341
             ||||||||||||||||||||
Sbjct: 42386 caagttcgtgctcggcggct 42405
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>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             B1356F10, complete sequence
          Length = 170681

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 32395 ctctccccctccccctccgc 32376
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>emb|AL512284.20| Human DNA sequence from clone RP11-248M22 on chromosome 10 Contains
             part of the gene for CamKI-like protein kinase (CKLiK)
             (LOC221042 LOC283070) and two CpG islands, complete
             sequence
          Length = 113920

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agctctccccctccccctcc 106
             ||||||||||||||||||||
Sbjct: 74100 agctctccccctccccctcc 74081
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>emb|AL355353.23| Human DNA sequence from clone RP11-385F7 on chromosome 6 Contains the
             5' end of the CD2AP gene for CD2-associated protein and
             three CpG islands, complete sequence
          Length = 141605

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tgttcccttctccacctccc 54
             ||||||||||||||||||||
Sbjct: 73980 tgttcccttctccacctccc 73999
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>emb|AL121929.17|HSBA416N2 Human DNA sequence from clone RP11-416N2 on chromosome 10 Contains the
             3' end of the NEURL gene for neuralized-like (Drosophila),
             the 3' end of the SH3MD1 gene for SH3 multiple domains 1
             and seven CpG islands, complete sequence
          Length = 203262

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    agctctccccctccccctcc 106
             ||||||||||||||||||||
Sbjct: 80194 agctctccccctccccctcc 80213
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 202    ctacgcggcgctggtggcgc 221
              ||||||||||||||||||||
Sbjct: 432710 ctacgcggcgctggtggcgc 432691
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 220    gcggcacgcgcgcgtcgacc 239
              ||||||||||||||||||||
Sbjct: 151079 gcggcacgcgcgcgtcgacc 151098
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 220   gcggcacgcgcgcgtcgacc 239
             ||||||||||||||||||||
Sbjct: 62060 gcggcacgcgcgcgtcgacc 62079
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>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21,
             complete sequence
          Length = 130433

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    ttctgttcccttctccacct 51
             ||||||||||||||||||||
Sbjct: 11253 ttctgttcccttctccacct 11234
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>gb|AC154873.6| Mus musculus chromosome 1, clone RP23-71J17, complete sequence
          Length = 256719

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agctctccccctccccctcc 106
             ||||||||||||||||||||
Sbjct: 13362 agctctccccctccccctcc 13343
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 208     ggcgctggtggcgcggcacg 227
               ||||||||||||||||||||
Sbjct: 2958108 ggcgctggtggcgcggcacg 2958089
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>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     ctgcgcccctactactcgga 267
               ||||||||||||||||||||
Sbjct: 2922509 ctgcgcccctactactcgga 2922490
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>gb|AE012335.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 243
            of 460 of the complete genome
          Length = 10811

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tccagtcctcgcgcaaggtg 385
            ||||||||||||||||||||
Sbjct: 8081 tccagtcctcgcgcaaggtg 8100
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>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 248     ctgcgcccctactactcgga 267
               ||||||||||||||||||||
Sbjct: 2468566 ctgcgcccctactactcgga 2468585
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>dbj|AB232923.1| Oryzias latipes hox gene cluster, complete cds, contains hoxDa
          Length = 225033

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ctgttcccttctccacctcc 53
              ||||||||||||||||||||
Sbjct: 196006 ctgttcccttctccacctcc 196025



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ctgttcccttctccacctcc 53
             ||||||||||||||||||||
Sbjct: 35342 ctgttcccttctccacctcc 35323
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>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete
              sequence
          Length = 148021

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctctccccctccccctccgc 108
              ||||||||||||||||||||
Sbjct: 121693 ctctccccctccccctccgc 121674
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>gb|AY667408.1| Escherichia coli O86:H2 O-antigen gene cluster, complete sequence
          Length = 13990

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  gagccccttcgcgcaccagc 296
            ||||||||||||||||||||
Sbjct: 7664 gagccccttcgcgcaccagc 7645
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>gb|AC174641.3| Mus musculus BAC clone RP24-406C15 from chromosome y, complete sequence
          Length = 174265

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agctctccccctccccctcc 106
             ||||||||||||||||||||
Sbjct: 80777 agctctccccctccccctcc 80758
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>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09,
              complete sequence
          Length = 143533

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctctccccctccccctccgc 108
              ||||||||||||||||||||
Sbjct: 122619 ctctccccctccccctccgc 122600
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>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09,
              complete sequence
          Length = 143533

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     ctctccccctccccctccgc 108
              ||||||||||||||||||||
Sbjct: 122619 ctctccccctccccctccgc 122600
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 366     tccagtcctcgcgcaaggtg 385
               ||||||||||||||||||||
Sbjct: 2228714 tccagtcctcgcgcaaggtg 2228695
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    tccgggtggcagtgctgccg 166
              ||||||||||||||||||||
Sbjct: 777273 tccgggtggcagtgctgccg 777292
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 21508876 ctctccccctccccctccgc 21508857



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 20313583 ctctccccctccccctccgc 20313602



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 3388960 ctctccccctccccctccgc 3388979



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 3378874 ctctccccctccccctccgc 3378893
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 212     ctggtggcgcggcacgcgcg 231
               ||||||||||||||||||||
Sbjct: 4606225 ctggtggcgcggcacgcgcg 4606206
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 7056121 ctctccccctccccctccgc 7056102
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 206      gcggcgctggtggcgcggcacgcgcgcg 233
                ||||||||||||||||||| ||| ||||
Sbjct: 32519580 gcggcgctggtggcgcggctcgcccgcg 32519553



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 14805609 ctctccccctccccctccgc 14805628



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 6514485 ctctccccctccccctccgc 6514504
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 10417700 ctctccccctccccctccgc 10417719
to top
>gb|AY012189.1| Escherichia coli isolate M1182 GDP-mannose pyrophosphorylase (manC),
            putative glycosyl transferase, and phosphomannomutase
            (manB) genes, complete cds
          Length = 3611

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  gagccccttcgcgcaccagc 296
            ||||||||||||||||||||
Sbjct: 2583 gagccccttcgcgcaccagc 2564
to top
>dbj|AP002480.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0469E05
          Length = 160769

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 62660 ctctccccctccccctccgc 62679
to top
>gb|AC098820.3| Homo sapiens BAC clone RP11-253L15 from 2, complete sequence
          Length = 155669

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    agctctccccctccccctcc 106
             ||||||||||||||||||||
Sbjct: 42247 agctctccccctccccctcc 42228
to top
>dbj|AP002070.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0511C01
          Length = 170402

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     ctctccccctccccctccgc 108
              ||||||||||||||||||||
Sbjct: 124420 ctctccccctccccctccgc 124439
to top
>dbj|AP003878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1120_C08
          Length = 150300

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ctggtggcgcggcacgcgcg 231
              ||||||||||||||||||||
Sbjct: 130073 ctggtggcgcggcacgcgcg 130054
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     gcgctggtggcgcggcacgc 228
               ||||||||||||||||||||
Sbjct: 1735453 gcgctggtggcgcggcacgc 1735434
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 206     gcggcgctggtggcgcggca 225
               ||||||||||||||||||||
Sbjct: 2745163 gcggcgctggtggcgcggca 2745144
to top
>dbj|AP005516.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0066H10
          Length = 200968

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    ctctccccctccccctccgc 108
             ||||||||||||||||||||
Sbjct: 82810 ctctccccctccccctccgc 82791
to top
>gb|AY670704.1| Escherichia coli O86 O-antigen gene cluster, complete sequence
          Length = 14156

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  gagccccttcgcgcaccagc 296
            ||||||||||||||||||||
Sbjct: 7535 gagccccttcgcgcaccagc 7516
to top
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577G06
          Length = 58137

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 212   ctggtggcgcggcacgcgcg 231
             ||||||||||||||||||||
Sbjct: 20730 ctggtggcgcggcacgcgcg 20711
to top
>emb|AL935145.12| Zebrafish DNA sequence from clone CH211-173B9 in linkage group 20,
             complete sequence
          Length = 157156

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    acagcgcaaacatttctgtt 38
             ||||||||||||||||||||
Sbjct: 23422 acagcgcaaacatttctgtt 23441
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 208     ggcgctggtggcgcggcacg 227
               ||||||||||||||||||||
Sbjct: 2984010 ggcgctggtggcgcggcacg 2983991
to top
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 220     gcggcacgcgcgcgtcgacctcgc 243
               ||||||||||||||||||| ||||
Sbjct: 1454779 gcggcacgcgcgcgtcgacgtcgc 1454756
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>gb|DQ011534.1| Escherichia fergusonii strain EC2781b serotype O157 O-antigen gene
             cluster, partial sequence
          Length = 13759

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   gagccccttcgcgcaccagc 296
             ||||||||||||||||||||
Sbjct: 10656 gagccccttcgcgcaccagc 10637
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ccccctccgcaatggagccc 118
               ||||||||||||||||||||
Sbjct: 2803774 ccccctccgcaatggagccc 2803793
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>gb|AF061251.1|AF061251 Eschericia coli serotype O157:H7 O antigen gene cluster
          Length = 14002

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   gagccccttcgcgcaccagc 296
             ||||||||||||||||||||
Sbjct: 10846 gagccccttcgcgcaccagc 10827
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 21819075 ctctccccctccccctccgc 21819056



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 20623822 ctctccccctccccctccgc 20623841



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       ctctccccctccccctccgc 108
                ||||||||||||||||||||
Sbjct: 19658848 ctctccccctccccctccgc 19658829



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 3397665 ctctccccctccccctccgc 3397684



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 89      ctctccccctccccctccgc 108
               ||||||||||||||||||||
Sbjct: 3387579 ctctccccctccccctccgc 3387598
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>emb|AJ874112.1| Polyangium cellulosum disA gene, disB gene, disC gene, disD gene, ORF1,
             ORF2, ORF3, ORF4, ORF5, ORF6, ORF7, ORF8, ORF9, ORF10,
             ORF11, ORF12, ORF13, ORF14, ORF15, ORF16, ORF17, ORF18 and
             ORF19
          Length = 86080

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ctacgcggcgctggtggcgc 221
             ||||||||||||||||||||
Sbjct: 73580 ctacgcggcgctggtggcgc 73599
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     gagccccttcgcgcaccagc 296
               ||||||||||||||||||||
Sbjct: 2846702 gagccccttcgcgcaccagc 2846721
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>gb|AC153524.3| Mus musculus 10 BAC RP23-349H12 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 167574

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    ttcccttctccacctccccg 56
             ||||||||||||||||||||
Sbjct: 19476 ttcccttctccacctccccg 19495
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>gb|AY220982.1| Escherichia coli O86:B7 O-antigen gene cluster, complete sequence
          Length = 19288

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 277  gagccccttcgcgcaccagc 296
            ||||||||||||||||||||
Sbjct: 8904 gagccccttcgcgcaccagc 8885
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 215     gtggcgcggcacgcgcgcgt 234
               ||||||||||||||||||||
Sbjct: 2704411 gtggcgcggcacgcgcgcgt 2704392
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     gagccccttcgcgcaccagc 296
               ||||||||||||||||||||
Sbjct: 2776488 gagccccttcgcgcaccagc 2776507
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>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 248     ctgcgcccctactactcgga 267
               ||||||||||||||||||||
Sbjct: 1848485 ctgcgcccctactactcgga 1848466
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>dbj|AB008676.1| Escherichia coli 0157 DNA, map position at 46 min., complete cds
          Length = 31482

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   gagccccttcgcgcaccagc 296
             ||||||||||||||||||||
Sbjct: 12503 gagccccttcgcgcaccagc 12484


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,908,070
Number of Sequences: 3902068
Number of extensions: 2908070
Number of successful extensions: 92240
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 94
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89129
Number of HSP's gapped (non-prelim): 3111
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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