Clone Information

BLAST Search Result

Clone Name	bastl04f07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|NM_185137.1\| Oryza sativa (japonica cultivar-group), mRNA	281	1e-72
2	dbj\|AK067902.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	281	1e-72
3	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	133	6e-28
4	gb\|AC091247.4\| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ...	133	6e-28
5	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	133	6e-28
6	ref\|NM_111744.3\| Arabidopsis thaliana DEX1 (DEFECTIVE IN EXINE F...	74	5e-10
7	gb\|AF257187.1\|AF257187 Arabidopsis thaliana defective in exine f...	74	5e-10
8	gb\|BT005785.1\| Arabidopsis thaliana clone RAFL15-34-O06 (R50099)...	74	5e-10
9	emb\|BX824633.1\|CNS0A7UY Arabidopsis thaliana Full-length cDNA Co...	68	3e-08
10	ref\|XM_474423.1\| Oryza sativa (japonica cultivar-group), predic...	48	0.028
11	emb\|AL606686.3\|OSJN00084 Oryza sativa genomic DNA, chromosome 4,...	48	0.028
12	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.028
13	emb\|AL732347.3\| Oryza sativa genomic DNA, chromosome 4, BAC clon...	48	0.028
14	gb\|CP000086.1\| Burkholderia thailandensis E264 chromosome I, com...	48	0.028
15	emb\|AL606651.3\|OSJN00092 Oryza sativa genomic DNA, chromosome 4,...	48	0.028
16	emb\|BX640441.1\| Bordetella bronchiseptica strain RB50, complete ...	46	0.11
17	emb\|BX640429.1\| Bordetella parapertussis strain 12822, complete ...	46	0.11
18	gb\|CP000157.1\| Erythrobacter litoralis HTCC2594, complete genome	46	0.11
19	gb\|U50602.1\|HSU50602 Human Promoter Capture subclone s3-1	44	0.43
20	gb\|U29488.2\| Caenorhabditis elegans cosmid C56C10, complete sequ...	42	1.7
21	gb\|AC167718.4\| Culex pipiens quinquefasciatus, clone Culex pipie...	42	1.7
22	ref\|NM_193639.1\| Oryza sativa (japonica cultivar-group), predic...	42	1.7
23	gb\|AC118630.8\| Mus musculus chromosome 14, clone RP24-92O1, comp...	42	1.7
24	gb\|CP000125.1\| Burkholderia pseudomallei 1710b chromosome II, co...	42	1.7
25	gb\|AC124524.3\| Mus musculus BAC clone RP23-402C9 from chromosome...	42	1.7
26	gb\|CP000270.1\| Burkholderia xenovorans LB400 chromosome 1, compl...	42	1.7
27	gb\|AC167662.6\| Culex pipiens quinquefasciatus, clone Culex pipie...	42	1.7
28	emb\|BX571966.1\| Burkholderia pseudomallei strain K96243, chromos...	42	1.7
29	ref\|NM_062939.2\| Caenorhabditis elegans DNaJ domain (prokaryotic...	42	1.7
30	dbj\|AP008207.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
31	gb\|CP000251.1\| Anaeromyxobacter dehalogenans 2CP-C, complete genome	42	1.7
32	dbj\|AP008226.1\| Thermus thermophilus HB8 genomic DNA, complete g...	42	1.7
33	dbj\|AP002908.2\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
34	dbj\|AP003310.5\| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
35	gb\|AC115835.6\| Mus musculus chromosome 3, clone RP24-184C18, com...	42	1.7
36	ref\|XM_470162.1\| Oryza sativa (japonica cultivar-group), mRNA	40	6.8
37	gb\|CP000010.1\| Burkholderia mallei ATCC 23344 chromosome 1, comp...	40	6.8
38	gb\|AE016822.1\| Leifsonia xyli subsp. xyli str. CTCB07, complete ...	40	6.8
39	gb\|BC055100.1\| Mus musculus WD repeat and SOCS box-containing 2,...	40	6.8
40	gb\|CP000124.1\| Burkholderia pseudomallei 1710b chromosome I, com...	40	6.8
41	ref\|NM_021539.3\| Mus musculus WD repeat and SOCS box-containing ...	40	6.8
42	gb\|AC110234.11\| Mus musculus chromosome 5, clone RP23-76J15, com...	40	6.8
43	gb\|AC009326.8\|ATAC009326 Arabidopsis thaliana chromosome III P1 ...	40	6.8
44	emb\|Z35639.1\|CED2045 Caenorhabditis elegans Cosmid D2045, comple...	40	6.8
45	gb\|AC113299.14\| Mus musculus chromosome 5, clone RP23-429P17, co...	40	6.8
46	gb\|AC133339.3\| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genom...	40	6.8
47	emb\|BX883045.1\| Rattus norvegicus chromosome 20, major histocomp...	40	6.8
48	emb\|BX640438.1\| Bordetella bronchiseptica strain RB50, complete ...	40	6.8
49	emb\|BX640424.1\| Bordetella parapertussis strain 12822, complete ...	40	6.8
50	emb\|BX640413.1\| Bordetella pertussis strain Tohama I, complete g...	40	6.8
51	emb\|BX571965.1\| Burkholderia pseudomallei strain K96243, chromos...	40	6.8
52	emb\|AJ421477.1\|MDI421477 Methylobacterium dichloromethanicum mtd...	40	6.8
53	gb\|AC092733.18\| Homo sapiens chromosome 11, clone RP11-193F22, c...	40	6.8
54	gb\|AE005983.1\| Caulobacter crescentus CB15 section 309 of 359 of...	40	6.8
55	gb\|AC063949.21\| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Ca...	40	6.8
56	dbj\|AK157999.1\| Mus musculus adult inner ear cDNA, RIKEN full-le...	40	6.8
57	gb\|AF257186.1\|AF257186 Arabidopsis thaliana defective in exine f...	40	6.8
58	dbj\|AK080976.1\| Mus musculus 4 days neonate thymus cDNA, RIKEN f...	40	6.8
59	ref\|NM_001026060.1\| Caenorhabditis elegans human ATX (ataxin) re...	40	6.8
60	ref\|NM_001026059.1\| Caenorhabditis elegans human ATX (ataxin) re...	40	6.8
61	gb\|CP000011.2\| Burkholderia mallei ATCC 23344 chromosome 2, comp...	40	6.8
62	dbj\|AP008214.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
63	gb\|AC158165.1\| Mus musculus BAC clone RP23-462M21 from chromosom...	40	6.8
64	gb\|AY211023.1\| Streptomyces violaceoruber strain SANK95570 plasm...	40	6.8
65	dbj\|AP004693.3\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
66	dbj\|AP004585.2\| Oryza sativa (japonica cultivar-group) genomic D...	40	6.8
67	dbj\|AK101289.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.8
68	gb\|AY739305.1\| Zea mays thiol oxidoreductase (TEL1) mRNA, comple...	40	6.8
69	gb\|AY571963.1\| Caenorhabditis elegans ATX-2 (atx-2) mRNA, comple...	40	6.8
70	gb\|CP000085.1\| Burkholderia thailandensis E264 chromosome II, co...	40	6.8
71	gb\|AE017221.1\| Thermus thermophilus HB27, complete genome	40	6.8

>ref|NM_185137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2834

 Score =  281 bits (142), Expect = 1e-72
 Identities = 211/234 (90%)
 Strand = Plus / Plus

                                                                       
Query: 262 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 321
           ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 85  aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 144

                                                                       
Query: 322 gatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagaccgaagtt 381
           ||||| || ||||  ||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 145 gatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagactgaagtt 204

                                                                       
Query: 382 agttccagcatttatgcaagtccactgattgctgatatcaacagtgatggaaagctggaa 441
           ||||||||||||||||||| |||  |||| |||||||||||||| ||||||||| |||||
Sbjct: 205 agttccagcatttatgcaactccgttgatcgctgatatcaacagcgatggaaagttggaa 264

                                                                 
Query: 442 gtagtggtgccatcatttgtccattacttagaagtgcttgaaggttccgatggg 495
           |||||||||||||||||||| |||||| | ||||| |||||||| || ||||||
Sbjct: 265 gtagtggtgccatcatttgttcattacctggaagttcttgaaggctctgatggg 318

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>dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121O19, full
           insert sequence
          Length = 3031

 Score =  281 bits (142), Expect = 1e-72
 Identities = 211/234 (90%)
 Strand = Plus / Plus

                                                                       
Query: 262 aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccaccttgatgaa 321
           ||||||||||| ||||||||||||| |||||||||||| || ||||||||||||||||||
Sbjct: 234 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccaccttgatgaa 293

                                                                       
Query: 322 gatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagaccgaagtt 381
           ||||| || ||||  ||||||||||||||||| || ||||||||||||||||| ||||||
Sbjct: 294 gatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagactgaagtt 353

                                                                       
Query: 382 agttccagcatttatgcaagtccactgattgctgatatcaacagtgatggaaagctggaa 441
           ||||||||||||||||||| |||  |||| |||||||||||||| ||||||||| |||||
Sbjct: 354 agttccagcatttatgcaactccgttgatcgctgatatcaacagcgatggaaagttggaa 413

                                                                 
Query: 442 gtagtggtgccatcatttgtccattacttagaagtgcttgaaggttccgatggg 495
           |||||||||||||||||||| |||||| | ||||| |||||||| || ||||||
Sbjct: 414 gtagtggtgccatcatttgttcattacctggaagttcttgaaggctctgatggg 467



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 175 cagatgcgtcccctcctcgccctcgc 200
           ||||||||||||||||||||| ||||
Sbjct: 147 cagatgcgtcccctcctcgccttcgc 172

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 315      tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
                |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 34378006 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 34378065

                                                                   
Query: 375      cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
                 ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 34378066 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 34378116



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 427      gatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgcttgaaggt 486
                ||||||||| ||||||||||||||||||||||||| |||||| | ||||| |||||||| 
Sbjct: 34378526 gatggaaagttggaagtagtggtgccatcatttgttcattacctggaagttcttgaaggc 34378585

                         
Query: 487      tccgatggg 495
                || ||||||
Sbjct: 34378586 tctgatggg 34378594



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 262      aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
                ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 34376355 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34376407



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 175      cagatgcgtcccctcctcgccctcgc 200
                ||||||||||||||||||||| ||||
Sbjct: 34376268 cagatgcgtcccctcctcgccttcgc 34376293



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 217      gcggcgggcgcggccgccgcgggggagg 244
                ||||||||||  ||||||||||||||||
Sbjct: 34655373 gcggcgggcggtgccgccgcgggggagg 34655346

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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
             sequence
          Length = 115393

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                         
Query: 315   tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
             |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 71688 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 71629

                                                                
Query: 375   cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
              ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 71628 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 71578



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Minus

                                                                         
Query: 427   gatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgcttgaaggt 486
             ||||||||| ||||||||||||||||||||||||| |||||| | ||||| |||||||| 
Sbjct: 71168 gatggaaagttggaagtagtggtgccatcatttgttcattacctggaagttcttgaaggc 71109

                      
Query: 487   tccgatggg 495
             || ||||||
Sbjct: 71108 tctgatggg 71100



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 262   aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
             ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 73339 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 73287



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 175   cagatgcgtcccctcctcgccctcgc 200
             ||||||||||||||||||||| ||||
Sbjct: 73426 cagatgcgtcccctcctcgccttcgc 73401

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  133 bits (67), Expect = 6e-28
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 315      tgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggagctgagatggcagac 374
                |||||||||||| || ||||  ||||||||||||||||| || |||||||||||||||||
Sbjct: 34468478 tgatgaagatgctttattgaagaccaagtgtccaaaacatgtagagctgagatggcagac 34468537

                                                                   
Query: 375      cgaagttagttccagcatttatgcaagtccactgattgctgatatcaacag 425
                 ||||||||||||||||||||||||| |||  |||| ||||||||||||||
Sbjct: 34468538 tgaagttagttccagcatttatgcaactccgttgatcgctgatatcaacag 34468588



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 62/69 (89%)
 Strand = Plus / Plus

                                                                            
Query: 427      gatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgcttgaaggt 486
                ||||||||| ||||||||||||||||||||||||| |||||| | ||||| |||||||| 
Sbjct: 34468998 gatggaaagttggaagtagtggtgccatcatttgttcattacctggaagttcttgaaggc 34469057

                         
Query: 487      tccgatggg 495
                || ||||||
Sbjct: 34469058 tctgatggg 34469066



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                     
Query: 262      aacaagttccgccagcgcgaggccagcgacgacatgctcggctacccccacct 314
                ||||||||||| ||||||||||||| |||||||||||| || |||||||||||
Sbjct: 34466827 aacaagttccggcagcgcgaggccaccgacgacatgcttggatacccccacct 34466879



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 175      cagatgcgtcccctcctcgccctcgc 200
                ||||||||||||||||||||| ||||
Sbjct: 34466740 cagatgcgtcccctcctcgccttcgc 34466765



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 217      gcggcgggcgcggccgccgcgggggagg 244
                ||||||||||  ||||||||||||||||
Sbjct: 34745445 gcggcgggcggtgccgccgcgggggagg 34745418

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>ref|NM_111744.3| Arabidopsis thaliana DEX1 (DEFECTIVE IN EXINE FORMATION 1)
           AT3G09090 (DEX1) mRNA, complete cds
          Length = 3722

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 148/185 (80%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 367 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 426

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 427 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 486

                                                                       
Query: 421 aacagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgctt 480
           ||||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||| |||
Sbjct: 487 aacagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaagttctt 546

                
Query: 481 gaagg 485
           |||||
Sbjct: 547 gaagg 551

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>gb|AF257187.1|AF257187 Arabidopsis thaliana defective in exine formation (DEX1) mRNA,
           complete cds
          Length = 3112

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 148/185 (80%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 367 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 426

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 427 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 486

                                                                       
Query: 421 aacagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgctt 480
           ||||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||| |||
Sbjct: 487 aacagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaagttctt 546

                
Query: 481 gaagg 485
           |||||
Sbjct: 547 gaagg 551

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>gb|BT005785.1| Arabidopsis thaliana clone RAFL15-34-O06 (R50099) unknown protein
           (At3g09090) mRNA, partial cds
          Length = 2893

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 148/185 (80%)
 Strand = Plus / Plus

                                                                       
Query: 301 ggctacccccaccttgatgaagatgcattgttgagtaccaagtgtccaaaacacgtggag 360
           ||||||||| |  ||||||||||||| || |||| |||  |||| || ||| |  |||||
Sbjct: 102 ggctaccccgatattgatgaagatgctttattgaatactcagtgcccgaaaaaattggag 161

                                                                       
Query: 361 ctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctgatatc 420
           ||| ||||||| || ||||| | ||| ||| ||||||| |  ||  ||||||||||||| 
Sbjct: 162 ctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctgatatt 221

                                                                       
Query: 421 aacagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgctt 480
           ||||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||| |||
Sbjct: 222 aacagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaagttctt 281

                
Query: 481 gaagg 485
           |||||
Sbjct: 282 gaagg 286

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>emb|BX824633.1|CNS0A7UY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH61ZA03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2946

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 106/130 (81%)
 Strand = Plus / Plus

                                                                       
Query: 356 tggagctgagatggcagaccgaagttagttccagcatttatgcaagtccactgattgctg 415
           |||||||| ||||||| || ||||| | ||| ||| ||||||| |  ||  |||||||||
Sbjct: 296 tggagctgcgatggcaaactgaagtcacttctagcgtttatgctacacccttgattgctg 355

                                                                       
Query: 416 atatcaacagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaag 475
           |||| ||||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||
Sbjct: 356 atattaacagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaag 415

                     
Query: 476 tgcttgaagg 485
           | ||||||||
Sbjct: 416 ttcttgaagg 425

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>ref|XM_474423.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1650

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 211 cttctcgcggcgggcgcggccgccgcgg 238
           |||||||||||||| |||||||||||||
Sbjct: 937 cttctcgcggcgggagcggccgccgcgg 910

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>emb|AL606686.3|OSJN00084 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070M12,
            complete sequence
          Length = 144670

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 211  cttctcgcggcgggcgcggccgccgcgg 238
            |||||||||||||| |||||||||||||
Sbjct: 3833 cttctcgcggcgggagcggccgccgcgg 3860

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                            
Query: 211      cttctcgcggcgggcgcggccgccgcgg 238
                |||||||||||||| |||||||||||||
Sbjct: 35067330 cttctcgcggcgggagcggccgccgcgg 35067357

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>emb|AL732347.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0723C07, complete
             sequence
          Length = 112897

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 211   cttctcgcggcgggcgcggccgccgcgg 238
             |||||||||||||| |||||||||||||
Sbjct: 22063 cttctcgcggcgggagcggccgccgcgg 22090

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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||||||||||||
Sbjct: 2462257 cgcggcgggcgcggccgccgcggg 2462280



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 215    tcgcggcgggcgcggccgccgc 236
              ||||||||||||||||||||||
Sbjct: 419868 tcgcggcgggcgcggccgccgc 419847



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 216    cgcggcgggcgcggccgccgcg 237
              ||||||||||||||||||||||
Sbjct: 406425 cgcggcgggcgcggccgccgcg 406446



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     gcggcgggcgcggccgccgc 236
               ||||||||||||||||||||
Sbjct: 2501000 gcggcgggcgcggccgccgc 2500981

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>emb|AL606651.3|OSJN00092 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088H09,
              complete sequence
          Length = 145391

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                          
Query: 211    cttctcgcggcgggcgcggccgccgcgg 238
              |||||||||||||| |||||||||||||
Sbjct: 126377 cttctcgcggcgggagcggccgccgcgg 126404

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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 216    cgcggcgggcgcggccgccgcgg 238
              |||||||||||||||||||||||
Sbjct: 283955 cgcggcgggcgcggccgccgcgg 283933

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>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 216    cgcggcgggcgcggccgccgcgg 238
              |||||||||||||||||||||||
Sbjct: 229443 cgcggcgggcgcggccgccgcgg 229421

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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 266    agttccgccagcgcgaggccagc 288
              |||||||||||||||||||||||
Sbjct: 398860 agttccgccagcgcgaggccagc 398838

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>gb|U50602.1|HSU50602 Human Promoter Capture subclone s3-1
          Length = 367

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 217 gcggcgggcgcggccgccgcgg 238
           ||||||||||||||||||||||
Sbjct: 275 gcggcgggcgcggccgccgcgg 296

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>gb|U29488.2| Caenorhabditis elegans cosmid C56C10, complete sequence
          Length = 35166

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   tccaaaacacgtggagctgag 365
             |||||||||||||||||||||
Sbjct: 20715 tccaaaacacgtggagctgag 20695

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>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940130D9, complete sequence
          Length = 117683

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cggcgggcgcggccgccgcgg 238
             |||||||||||||||||||||
Sbjct: 63318 cggcgggcgcggccgccgcgg 63298

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>ref|NM_193639.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 216 cgcggcgggcgcggccgccgcgggggagg 244
           ||||||||||||||| | |||||||||||
Sbjct: 69  cgcggcgggcgcggcgggcgcgggggagg 97

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>gb|AC118630.8| Mus musculus chromosome 14, clone RP24-92O1, complete sequence
          Length = 212974

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   atgcaagtccactgattgctg 415
             |||||||||||||||||||||
Sbjct: 19670 atgcaagtccactgattgctg 19690

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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gcggcgggcgcggccgccgcg 237
               |||||||||||||||||||||
Sbjct: 2455167 gcggcgggcgcggccgccgcg 2455187



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cgggcgcggccgccgcgggg 240
               ||||||||||||||||||||
Sbjct: 2737913 cgggcgcggccgccgcgggg 2737932

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>gb|AC124524.3| Mus musculus BAC clone RP23-402C9 from chromosome 14, complete sequence
          Length = 213751

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 395    atgcaagtccactgattgctg 415
              |||||||||||||||||||||
Sbjct: 168578 atgcaagtccactgattgctg 168598

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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    tcgcggcgggcgcggccgccgcggg 239
              |||||||||| ||||||||||||||
Sbjct: 679150 tcgcggcgggtgcggccgccgcggg 679174

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>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940141D9, complete sequence
          Length = 117679

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   cggcgggcgcggccgccgcgg 238
             |||||||||||||||||||||
Sbjct: 54363 cggcgggcgcggccgccgcgg 54383

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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    gcggcgggcgcggccgccgcg 237
              |||||||||||||||||||||
Sbjct: 635148 gcggcgggcgcggccgccgcg 635168



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 221    cgggcgcggccgccgcgggg 240
              ||||||||||||||||||||
Sbjct: 918403 cgggcgcggccgccgcgggg 918422

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>ref|NM_062939.2| Caenorhabditis elegans DNaJ domain (prokaryotic heat shock protein)
            family member (dnj-8) (dnj-8) mRNA, complete cds
          Length = 2750

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 345  tccaaaacacgtggagctgag 365
            |||||||||||||||||||||
Sbjct: 2190 tccaaaacacgtggagctgag 2210

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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 216      cgcggcgggcgcggccgccgcgggggagg 244
                ||||||||||||||| | |||||||||||
Sbjct: 22337520 cgcggcgggcgcggcgggcgcgggggagg 22337492

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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 82      cgcccgctcgcccgccgggccgaga 106
               |||||||||||||| ||||||||||
Sbjct: 4739168 cgcccgctcgcccggcgggccgaga 4739192



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 224     gcgcggccgccgcgggggagg 244
               |||||||||||||||||||||
Sbjct: 4339446 gcgcggccgccgcgggggagg 4339426



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 220    gcgggcgcggccgccgcgggggagg 244
              |||||||||| ||||||||||||||
Sbjct: 605673 gcgggcgcgggcgccgcgggggagg 605697



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               |||||||||||||| |||||||||
Sbjct: 2086931 cgcggcgggcgcgggcgccgcggg 2086954



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 82      cgcccgctcgcccgccgggc 101
               ||||||||||||||||||||
Sbjct: 1661056 cgcccgctcgcccgccgggc 1661075

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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    cccctcctcgccctcgccgtg 204
              |||||||||||||||||||||
Sbjct: 987395 cccctcctcgccctcgccgtg 987375



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgctcgcccgccgggccgag 105
              ||||||||||||||||||||
Sbjct: 630334 cgctcgcccgccgggccgag 630353

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>dbj|AP002908.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0013G02
          Length = 163419

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 216   cgcggcgggcgcggccgccgcgggggagg 244
             ||||||||||||||| | |||||||||||
Sbjct: 34790 cgcggcgggcgcggcgggcgcgggggagg 34762

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>dbj|AP003310.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F12
          Length = 137716

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 216    cgcggcgggcgcggccgccgcgggggagg 244
              ||||||||||||||| | |||||||||||
Sbjct: 119999 cgcggcgggcgcggcgggcgcgggggagg 119971

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>gb|AC115835.6| Mus musculus chromosome 3, clone RP24-184C18, complete sequence
          Length = 172025

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 463    cattacttagaagtgcttgaa 483
              |||||||||||||||||||||
Sbjct: 119505 cattacttagaagtgcttgaa 119525

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>ref|XM_470162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 217 gcggcgggcgcggccgccgcgggggagg 244
           ||||||||||  ||||||||||||||||
Sbjct: 52  gcggcgggcggtgccgccgcgggggagg 79

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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 1454671 cgcggcgggcgcggctgccgcggg 1454648

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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 214     ctcgcggcgggcgcggccgccgcggggg 241
               ||||||||||||||  ||||||||||||
Sbjct: 1085555 ctcgcggcgggcgcttccgccgcggggg 1085582

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>gb|BC055100.1| Mus musculus WD repeat and SOCS box-containing 2, mRNA (cDNA clone
           MGC:58219 IMAGE:6589250), complete cds
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 62  gcggcgggcgcggccgcggcgggg 85

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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 2680819 cgcggcgggcgcggctgccgcggg 2680796

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>ref|NM_021539.3| Mus musculus WD repeat and SOCS box-containing 2 (Wsb2), mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 62  gcggcgggcgcggccgcggcgggg 85

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>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 217   gcggcgggcgcggccgccgcgggg 240
             ||||||||||||||||| ||||||
Sbjct: 16948 gcggcgggcgcggccgcggcgggg 16925

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>gb|AC009326.8|ATAC009326 Arabidopsis thaliana chromosome III P1 MZB10 genomic sequence, complete
             sequence
          Length = 85561

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                         
Query: 422   acagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgcttg 481
             |||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||| ||||
Sbjct: 47897 acagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaagttcttg 47838

                 
Query: 482   aagg 485
             ||||
Sbjct: 47837 aagg 47834

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>emb|Z35639.1|CED2045 Caenorhabditis elegans Cosmid D2045, complete sequence
          Length = 37249

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    tcctccgagtccgtcctcct 47
             ||||||||||||||||||||
Sbjct: 11272 tcctccgagtccgtcctcct 11253

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>gb|AC113299.14| Mus musculus chromosome 5, clone RP23-429P17, complete sequence
          Length = 214124

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 217   gcggcgggcgcggccgccgcgggg 240
             ||||||||||||||||| ||||||
Sbjct: 17693 gcggcgggcgcggccgcggcgggg 17716

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>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
              sequence
          Length = 164236

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 217    gcggcgggcgcggccgccgcgggggagg 244
              ||||||||||  ||||||||||||||||
Sbjct: 113090 gcggcgggcggtgccgccgcgggggagg 113063

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>emb|BX883045.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 4/11
          Length = 346406

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    ggacccctaggctcctctgg 171
              ||||||||||||||||||||
Sbjct: 115940 ggacccctaggctcctctgg 115921

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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 214349 cgcggcgggcgcggccgccg 214368

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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 212556 cgcggcgggcgcggccgccg 212575

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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 216    cgcggcgggcgcggccgccg 235
              ||||||||||||||||||||
Sbjct: 227083 cgcggcgggcgcggccgccg 227064

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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||| ||||||||
Sbjct: 1702652 cgcggcgggcgcggctgccgcggg 1702675

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>emb|AJ421477.1|MDI421477 Methylobacterium dichloromethanicum mtdB gene, mchA gene, fae gene
            for Hypothetical protein, fae gene and ORF1-5, strain DM4
            (DSM6343)
          Length = 7038

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 120  tcgccgccgcctcgtcgcgaccgc 143
            ||||||||||||||||||| ||||
Sbjct: 1592 tcgccgccgcctcgtcgcggccgc 1569

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>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    gtcccctcctcgccctcgcc 201
              ||||||||||||||||||||
Sbjct: 152085 gtcccctcctcgccctcgcc 152066

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>gb|AE005983.1| Caulobacter crescentus CB15 section 309 of 359 of the complete genome
          Length = 13041

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ggcgggcgcggccgccgcgg 238
             ||||||||||||||||||||
Sbjct: 12292 ggcgggcgcggccgccgcgg 12273

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>gb|AC063949.21| Homo sapiens 12 BAC RP11-693J15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172984

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   tgaagatgcattgttgagta 337
             ||||||||||||||||||||
Sbjct: 65252 tgaagatgcattgttgagta 65271

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>dbj|AK157999.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930015G07 product:WD repeat and SOCS
           box-containing 2, full insert sequence
          Length = 1565

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 21  gcggcgggcgcggccgcggcgggg 44

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>gb|AF257186.1|AF257186 Arabidopsis thaliana defective in exine formation (DEX1) gene,
            complete cds
          Length = 7353

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                        
Query: 422  acagtgatggaaagctggaagtagtggtgccatcatttgtccattacttagaagtgcttg 481
            |||||||||||||||| ||  | || || ||||| ||||| |||||| | ||||| ||||
Sbjct: 2551 acagtgatggaaagcttgacattgttgttccatcttttgttcattacctcgaagttcttg 2610

                
Query: 482  aagg 485
            ||||
Sbjct: 2611 aagg 2614

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>dbj|AK080976.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched
           library, clone:B630006D22 product:WSB-2 protein, full
           insert sequence
          Length = 3358

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 217 gcggcgggcgcggccgccgcgggg 240
           ||||||||||||||||| ||||||
Sbjct: 63  gcggcgggcgcggccgcggcgggg 86

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>ref|NM_001026060.1| Caenorhabditis elegans human ATX (ataxin) related family member
           (atx-2) (atx-2) mRNA, complete cds
          Length = 3612

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 490 tcctccgagtccgtcctcct 471

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>ref|NM_001026059.1| Caenorhabditis elegans human ATX (ataxin) related family member
           (atx-2) (atx-2) mRNA, complete cds
          Length = 3612

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 490 tcctccgagtccgtcctcct 471

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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 221     cgggcgcggccgccgcgggg 240
               ||||||||||||||||||||
Sbjct: 1210871 cgggcgcggccgccgcgggg 1210852

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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 184      cccctcctcgccctcgccgt 203
                ||||||||||||||||||||
Sbjct: 23078799 cccctcctcgccctcgccgt 23078818

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>gb|AC158165.1| Mus musculus BAC clone RP23-462M21 from chromosome 6, complete sequence
          Length = 179032

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 378    agttagttccagcatttatg 397
              ||||||||||||||||||||
Sbjct: 107958 agttagttccagcatttatg 107939

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>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete
             sequence
          Length = 96742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   ctcgcggcgggcgcggccgc 233
             ||||||||||||||||||||
Sbjct: 50914 ctcgcggcgggcgcggccgc 50933

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>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0461F06
          Length = 147891

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  cccctcctcgccctcgccgt 203
            ||||||||||||||||||||
Sbjct: 1898 cccctcctcgccctcgccgt 1917

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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    cccctcctcgccctcgccgt 203
              ||||||||||||||||||||
Sbjct: 138527 cccctcctcgccctcgccgt 138546

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>dbj|AK101289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G01, full
           insert sequence
          Length = 685

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 217 gcggcgggcgcggccgccgcgggggagg 244
           ||||||||||  ||||||||||||||||
Sbjct: 129 gcggcgggcggtgccgccgcgggggagg 156

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>gb|AY739305.1| Zea mays thiol oxidoreductase (TEL1) mRNA, complete cds
          Length = 2018

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 180 gcgtcccctcctcgccctcgccgt 203
           ||||| ||||||||||||||||||
Sbjct: 187 gcgtctcctcctcgccctcgccgt 210

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>gb|AY571963.1| Caenorhabditis elegans ATX-2 (atx-2) mRNA, complete cds
          Length = 3634

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  tcctccgagtccgtcctcct 47
           ||||||||||||||||||||
Sbjct: 512 tcctccgagtccgtcctcct 493

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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 216     cgcggcgggcgcggccgccgcggg 239
               ||||||||||||||||| ||||||
Sbjct: 2012419 cgcggcgggcgcggccggcgcggg 2012442

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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     cgctcgcccgccgggccgag 105
              ||||||||||||||||||||
Sbjct: 292495 cgctcgcccgccgggccgag 292514


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,894,174
Number of Sequences: 3902068
Number of extensions: 3894174
Number of successful extensions: 99994
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95743
Number of HSP's gapped (non-prelim): 4242
length of query: 499
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 477
effective length of database: 17,147,199,772
effective search space: 8179214291244
effective search space used: 8179214291244
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result