Clone Name | bastl04f05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | XYLA_AGRT5 (Q8U7G6) Xylose isomerase (EC 5.3.1.5) | 28 | 4.9 | 2 | XYLA_BRUSU (Q8G204) Xylose isomerase (EC 5.3.1.5) | 28 | 6.4 | 3 | XYLA_BRUME (Q8YFX5) Xylose isomerase (EC 5.3.1.5) | 28 | 6.4 |
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>XYLA_AGRT5 (Q8U7G6) Xylose isomerase (EC 5.3.1.5)| Length = 436 Score = 28.5 bits (62), Expect = 4.9 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 72 CLDGARGCGATSFSLWGGRRG 10 C+D + G ++ LWGGR G Sbjct: 172 CMDATKTLGGANYVLWGGREG 192
>XYLA_BRUSU (Q8G204) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 28.1 bits (61), Expect = 6.4 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 72 CLDGARGCGATSFSLWGGRRG 10 C+D + G ++ LWGGR G Sbjct: 172 CIDATKRLGGENYVLWGGREG 192
>XYLA_BRUME (Q8YFX5) Xylose isomerase (EC 5.3.1.5)| Length = 435 Score = 28.1 bits (61), Expect = 6.4 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = -2 Query: 72 CLDGARGCGATSFSLWGGRRG 10 C+D + G ++ LWGGR G Sbjct: 172 CIDATKRLGGENYVLWGGREG 192 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.301 0.110 0.308 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,325,438 Number of Sequences: 219361 Number of extensions: 207770 Number of successful extensions: 524 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 500 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 524 length of database: 80,573,946 effective HSP length: 52 effective length of database: 69,167,174 effective search space used: 1660012176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits)