ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl04f02 |
|---|---|
| Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 202 bits (513), Expect = 5e-52 Identities = 99/141 (70%), Positives = 115/141 (81%) Frame = +3 Query: 63 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 242 MESYL ENFG VK KNSS+EAL+RWRKLC +VKNPKRRFRFTANL KR EA+AI+ +N E Sbjct: 1 MESYLNENFGDVKPKNSSDEALQRWRKLCWIVKNPKRRFRFTANLSKRSEAEAIRRSNQE 60 Query: 243 KLRVAVLVSKAALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGA 422 K RVAVLVS+AALQFI+ LKL +EY +PEEV+ AGF+IC DELGSIVEGHD KKL HG Sbjct: 61 KFRVAVLVSQAALQFINSLKLSSEYTLPEEVRKAGFEICPDELGSIVEGHDLKKLKIHGG 120 Query: 423 VAGIAAKLATSPTDGLDTAED 485 G+ KL+TS G+ T+ED Sbjct: 121 TEGLTEKLSTSIASGISTSED 141
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 186 bits (473), Expect = 2e-47 Identities = 97/138 (70%), Positives = 108/138 (78%) Frame = +3 Query: 63 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 242 MESYL ENF VK K+SSEE L +WR LC VVKNPKRRFRFTANL KR EA A++ N E Sbjct: 1 MESYLNENFD-VKAKHSSEEVLEKWRNLCGVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59 Query: 243 KLRVAVLVSKAALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGA 422 KLR+AVLVSKAA QFI G+ ++Y VPE+VKAAGF+ICADELGSIVE HD KKL HG Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYTVPEDVKAAGFEICADELGSIVESHDVKKLKFHGG 118 Query: 423 VAGIAAKLATSPTDGLDT 476 V G+A KL SPTDGL T Sbjct: 119 VDGLAGKLKASPTDGLST 136
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 182 bits (461), Expect = 6e-46 Identities = 96/140 (68%), Positives = 106/140 (75%) Frame = +3 Query: 63 MESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHE 242 MESYL NF VK K+SSEE L +WR LCSVVKNPKRRFRFTANL KR EA A++ N E Sbjct: 1 MESYLNSNFD-VKAKHSSEEVLEKWRNLCSVVKNPKRRFRFTANLSKRYEAAAMRRTNQE 59 Query: 243 KLRVAVLVSKAALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGA 422 KLR+AVLVSKAA QFI G+ ++Y VPEEVKAAGF ICADELGSIVEGHD KKL HG Sbjct: 60 KLRIAVLVSKAAFQFISGVS-PSDYKVPEEVKAAGFDICADELGSIVEGHDVKKLKFHGG 118 Query: 423 VAGIAAKLATSPTDGLDTAE 482 V G++ KL P GL T E Sbjct: 119 VDGLSGKLKACPNAGLSTGE 138
>ACA4_ARATH (O22218) Calcium-transporting ATPase 4, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 4) Length = 1030 Score = 103 bits (257), Expect = 2e-22 Identities = 60/129 (46%), Positives = 80/129 (62%) Frame = +3 Query: 96 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 275 V+ KN S EA +RWR S+VKN RRFR +LDK + + KH EK+RVA V KA Sbjct: 10 VEAKNPSLEARQRWRSSVSIVKNRTRRFRNIRDLDKLADYENKKHQIQEKIRVAFFVQKA 69 Query: 276 ALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAKLATS 455 AL FI R EY + +EVK AGF I ADEL S+V +D+K L G V +A K++ S Sbjct: 70 ALHFIDA-AARPEYKLTDEVKKAGFSIEADELASMVRKNDTKSLAQKGGVEELAKKVSVS 128 Query: 456 PTDGLDTAE 482 ++G+ ++E Sbjct: 129 LSEGIRSSE 137
>ACA11_ARATH (Q9M2L4) Putative calcium-transporting ATPase 11, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 11) Length = 1025 Score = 101 bits (251), Expect = 1e-21 Identities = 59/129 (45%), Positives = 76/129 (58%) Frame = +3 Query: 96 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 275 V KN S EA +RWR +VKN RRFR +NLDK E + + EK+RV V KA Sbjct: 10 VASKNPSLEARQRWRSSVGLVKNRARRFRMISNLDKLAENEKKRCQIQEKIRVVFYVQKA 69 Query: 276 ALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAKLATS 455 A QFI R EY + +EVK AGF + ADEL S+V HD+K L G GIA K++ S Sbjct: 70 AFQFIDA-GARPEYKLTDEVKKAGFYVEADELASMVRNHDTKSLTKIGGPEGIAQKVSVS 128 Query: 456 PTDGLDTAE 482 +G+ ++E Sbjct: 129 LAEGVRSSE 137
>ACA8_ARATH (Q9LF79) Calcium-transporting ATPase 8, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 8) Length = 1074 Score = 56.2 bits (134), Expect = 5e-08 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 1/133 (0%) Frame = +3 Query: 96 VKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKA 275 + KN+S E L++WRK ++V N RRFR+T +L K E + ++ +K+R A Sbjct: 34 IPSKNASIERLQQWRK-AALVLNASRRFRYTLDLKKEQETREMR----QKIRSHAHALLA 88 Query: 276 ALQFIH-GLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAKLAT 452 A +F+ G + E A F I ++L + + H+S L +G G+A L T Sbjct: 89 ANRFMDMGRESGVEKTTGPATPAGDFGITPEQLVIMSKDHNSGALEQYGGTQGLANLLKT 148 Query: 453 SPTDGLDTAEDSM 491 +P G+ +D + Sbjct: 149 NPEKGISGDDDDL 161
>ACA9_ARATH (Q9LU41) Putative calcium-transporting ATPase 9, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 9) Length = 1073 Score = 53.5 bits (127), Expect = 3e-07 Identities = 41/133 (30%), Positives = 66/133 (49%), Gaps = 7/133 (5%) Frame = +3 Query: 105 KNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEK--LRVAVLVSKAA 278 KN+S E+LRRWR+ ++V N RRFR+T +L+K +H ++ + +R V +AA Sbjct: 38 KNASVESLRRWRQ-AALVLNASRRFRYTLDLNKE------EHYDNRRRMIRAHAQVIRAA 90 Query: 279 LQFIHGLKLRNEYVV-----PEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAK 443 L F KL E + F I ++L S+ + L +G V G+A K Sbjct: 91 LLF----KLAGEQQIAFGSSTPAASTGNFDIDLEKLVSMTRNQNMSNLQQYGGVKGVAEK 146 Query: 444 LATSPTDGLDTAE 482 L ++ G++ E Sbjct: 147 LKSNMEQGINEDE 159
>ACA10_ARATH (Q9SZR1) Putative calcium-transporting ATPase 10, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 10) Length = 1069 Score = 44.7 bits (104), Expect = 1e-04 Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 6/166 (3%) Frame = +3 Query: 12 GEGARSPPAGEGGREVGMESYLEEN---FGGVKGKNSSEEALRRWRKLCSVVKNPKRRFR 182 G+ SP + E G S+ E F KN+ E LRRWR+ ++V N RRFR Sbjct: 3 GQFNNSPRGEDKDVEAGTSSFTEYEDSPFDIASTKNAPVERLRRWRQ-AALVLNASRRFR 61 Query: 183 FTANLDKRGEAQAI--KHANHEKLRVAVLVSKAALQFIHGLKLRNEYVVPEEVKAAG-FQ 353 +T +L + + + + K H + A + KAA + G+ P G F Sbjct: 62 YTLDLKREEDKKQMLRKMRAHAQAIRAAHLFKAAASRVTGI------ASPLPTPGGGDFG 115 Query: 354 ICADELGSIVEGHDSKKLLTHGAVAGIAAKLATSPTDGLDTAEDSM 491 I +++ SI + L G V G++ L T+ G+ +D + Sbjct: 116 IGQEQIVSISRDQNIGALQELGGVRGLSDLLKTNLEKGIHGDDDDI 161
>SMBT1_HUMAN (Q9UHJ3) Scm-like with four MBT domains protein 1 (Renal ubiquitous| protein 1) Length = 866 Score = 34.3 bits (77), Expect = 0.19 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = +1 Query: 262 WCRKLHCSLYMVSNFEMNMLSLKKSRRQGSRFALMSWGPLLRAMTVKNCSPMVQLLE*QR 441 WC LY + E N +L+ +G R + W LR + CSP V LLE R Sbjct: 96 WCDIRKADLYPIGWCEQNKKTLEAP--EGIRDKVSDWDEFLRQTLIGACSPPVPLLEGLR 153 Query: 442 SLQHP 456 + ++P Sbjct: 154 NGRNP 158
>PROF_BOMMO (Q68HB4) Profilin| Length = 126 Score = 32.0 bits (71), Expect = 0.92 Identities = 14/30 (46%), Positives = 20/30 (66%) Frame = +3 Query: 336 KAAGFQICADELGSIVEGHDSKKLLTHGAV 425 K+ GF+I DE+ IV G +++ LLT G V Sbjct: 32 KSEGFEISKDEVAKIVAGFENESLLTSGGV 61
>ACA12_ARATH (Q9LY77) Putative calcium-transporting ATPase 12, plasma| membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform 12) Length = 1033 Score = 31.6 bits (70), Expect = 1.2 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 5/133 (3%) Frame = +3 Query: 108 NSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLR-----VAVLVSK 272 +S +A RRWR F + A R +K ++ ++ +S Sbjct: 19 SSLNKAQRRWR------------FAYAAIYSMRAMLSLVKEIVPARIDPKTSDASLSLSY 66 Query: 273 AALQFIHGLKLRNEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAKLAT 452 AL+ G K+ + +P A I ++L I++G D + G V G+AA L T Sbjct: 67 TALESGEGAKINS---MPLSYVPA---IDQEQLVEIMKGKDLPGIQALGGVEGVAASLRT 120 Query: 453 SPTDGLDTAEDSM 491 +PT G+ E + Sbjct: 121 NPTKGIHGNEQEV 133
>SMC2_SCHPO (P41003) Structural maintenance of chromosome 2 (Chromosome| segregation protein cut14) (Cell untimely torn protein 14) Length = 1172 Score = 31.2 bits (69), Expect = 1.6 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 185 EAEAALGVLDDAAELAPAPQRLLGRVLALDAPEVLLQVALHP 60 +A+ AL ++ EL PA Q + G L D PE +V HP Sbjct: 603 KAQLALELIGYDDELLPAMQYVFGSTLVCDTPESAKKVTFHP 644
>YA9A_SCHPO (Q09788) Hypothetical serine-rich protein C13G6.10c precursor| Length = 530 Score = 30.8 bits (68), Expect = 2.1 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 5/75 (6%) Frame = -1 Query: 451 VASFAAIPATAPWVS-----NFLLSWPSTMDPSSSAQIWNPAALTSSGTTYSFRSLRPCI 287 V S ++P + P S F S+P+T SSS+ PA+ T ++YS S Sbjct: 125 VWSNTSVPVSTPETSATSSSEFFTSYPATSSESSSSY---PASSTEVASSYSASSTEVTS 181 Query: 286 NCSAAFDTSTATRSF 242 + A+ + +T+T S+ Sbjct: 182 SYPASSEVATSTSSY 196
>SMBT1_MOUSE (Q9JMD1) Scm-like with four MBT domains protein 1| Length = 863 Score = 30.8 bits (68), Expect = 2.1 Identities = 18/65 (27%), Positives = 29/65 (44%) Frame = +1 Query: 262 WCRKLHCSLYMVSNFEMNMLSLKKSRRQGSRFALMSWGPLLRAMTVKNCSPMVQLLE*QR 441 WC LY + + N +L+ +G R + W L+ + C P V LLE R Sbjct: 96 WCDIRKAGLYPIGWCQQNKKTLEAP--EGIRDKVSDWNAFLQQTLIGACGPPVSLLEGLR 153 Query: 442 SLQHP 456 + ++P Sbjct: 154 NGRNP 158
>AT2B2_OREMO (P58165) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)| (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma membrane calcium ATPase isoform 2) (Fragment) Length = 1112 Score = 30.0 bits (66), Expect = 3.5 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 4/55 (7%) Frame = +3 Query: 339 AAGFQICADELGSIVEGHDSKKLLT----HGAVAGIAAKLATSPTDGLDTAEDSM 491 AA F EL S++E ++ ++ +G V G+ +L TSPT+GL A+ + Sbjct: 21 AAAFGCSLMELRSLMELRGTEAVVKLQEDYGGVEGLCKRLKTSPTEGLAGAQTDL 75
>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58| Length = 546 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%) Frame = -1 Query: 469 SPSVGDVA---SFAAIPATAPWVSNFLLSWPSTMDPSSSAQIWNPAALTSSGTTYSFRSL 299 +P+VG VA SFA +AP + + +T +++A PA+L+S ++SF Sbjct: 170 APAVGTVAPTFSFATPATSAPTTAPPAFGFGTTATTAAAAM---PASLSSGIGSFSFPKP 226 Query: 298 RPCINCSAAFDTSTAT 251 + S F+T+T T Sbjct: 227 QATTAASLNFNTTTTT 242
>RIMM_VIBCH (Q9KUF9) 16S rRNA-processing protein rimM| Length = 182 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +3 Query: 60 GMESYLEENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTA-NLDKRGE 212 G E+ ++N V GK S +R W K+ S NP+ F ++ +D++GE Sbjct: 3 GKETMSKQNEKLVVGKLGSSYGIRGWLKVFSYTDNPESIFDYSPWYIDQKGE 54
>SMBT1_RAT (Q9JMD2) Scm-like with four MBT domains protein 1| Length = 863 Score = 29.6 bits (65), Expect = 4.6 Identities = 18/65 (27%), Positives = 28/65 (43%) Frame = +1 Query: 262 WCRKLHCSLYMVSNFEMNMLSLKKSRRQGSRFALMSWGPLLRAMTVKNCSPMVQLLE*QR 441 WC LY + + N +L+ +G R + W L+ C P V LLE R Sbjct: 96 WCDIRRAGLYPIGWCQQNKKTLEAP--EGIRDKVSDWSAFLQRTLTGACGPPVALLEGLR 153 Query: 442 SLQHP 456 + ++P Sbjct: 154 NGRNP 158
>IDGF3_DROME (Q8MLZ7) Chitinase-like protein Idgf3 precursor (Imaginal disk| growth factor protein 3) Length = 441 Score = 29.6 bits (65), Expect = 4.6 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 1/94 (1%) Frame = +3 Query: 102 GKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAVLVSKAAL 281 G S +E L W ++CS++ NP +N + RG +K R +AA Sbjct: 327 GPQSKQEGLLNWAEICSLMPNP-------SNTNARGPNAPVKRVVDPTKRYGSYAFRAAD 379 Query: 282 Q-FIHGLKLRNEYVVPEEVKAAGFQICADELGSI 380 + HGL + Y P+ + A LG + Sbjct: 380 ENGDHGLWI--SYDDPDSASSKAMYARARNLGGV 411
>AT2B3_HUMAN (Q16720) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1220 Score = 29.6 bits (65), Expect = 4.6 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%) Frame = +3 Query: 336 KAAGFQICADELGSIVEGHDSKKLL----THGAVAGIAAKLATSPTDGL 470 +A GF EL +++E ++ L +G V+G+ +L TSPT+GL Sbjct: 23 QAGGFGCTLAELRTLMELRGAEALQKIEEAYGDVSGLCRRLKTSPTEGL 71
>YHI1_AZOBR (P26723) Hypothetical 18.6 kDa protein in hisH-hisA intergenic| region (ORF1) Length = 168 Score = 29.3 bits (64), Expect = 6.0 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 6/87 (6%) Frame = +3 Query: 114 SEEALRRWRKLCSVVKNPKRRFRFTANLDK--RGEAQAIKHA--NHEKLRVAVLVSKAAL 281 + E + R+ K VV R F LD G AQ +K A N + A L + Sbjct: 41 AREIMERYWKGVLVVPE---RILFVGRLDGVIAGSAQLVKPARNNEAQAHAATLTTSFVA 97 Query: 282 QFI--HGLKLRNEYVVPEEVKAAGFQI 356 + HGL R V EE +A+GF++ Sbjct: 98 PWARCHGLARRLTVAVEEEARASGFRV 124
>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)| (Translation initiation factor IF-2) Length = 1002 Score = 29.3 bits (64), Expect = 6.0 Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%) Frame = +3 Query: 282 QFIHGLKLRNEYVVPEEVKAA-GFQICADELGSIVEG 389 Q + L+L++EYV +EVKAA G +I A++L V G Sbjct: 682 QPLRELRLKSEYVHHKEVKAALGVKIAANDLEKAVSG 718
>OTX1_RAT (Q63410) Homeobox protein OTX1| Length = 355 Score = 29.3 bits (64), Expect = 6.0 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = -1 Query: 484 SSAVSSPSVGDVASFAAIPATAPWVSNFLLSWPSTMDPSSSAQIWNPAALTSSGTTYSFR 305 SSA SS S ++ A A A N + + S P++S+ IW+PA+++ S Sbjct: 134 SSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASS-IWSPASISPGSAPASVS 192 Query: 304 SLRP--------CINCSAAFDTSTATRSF 242 P C+ S A +TA S+ Sbjct: 193 VPEPLGAPSNASCMQRSVAAGAATAATSY 221
>OTX1_MOUSE (P80205) Homeobox protein OTX1| Length = 355 Score = 29.3 bits (64), Expect = 6.0 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Frame = -1 Query: 484 SSAVSSPSVGDVASFAAIPATAPWVSNFLLSWPSTMDPSSSAQIWNPAALTSSGTTYSFR 305 SSA SS S ++ A A A N + + S P++S+ IW+PA+++ S Sbjct: 134 SSASSSSSASSASANPAAAAAAGLGGNPVAAASSLSTPTASS-IWSPASISPGSAPTSVS 192 Query: 304 SLRP--------CINCSAAFDTSTATRSF 242 P C+ S A +TA S+ Sbjct: 193 VPEPLAAPSNASCMQRSVAAGAATAAASY 221
>Y2677_OCEIH (Q8EN13) UPF0271 protein OB2677| Length = 257 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%) Frame = +3 Query: 279 LQFIHGLKLRNEYVVPEEV-KAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAAK 443 LQ + G R + PEEV + +QI A + + V+GH+ + HGA+ +AAK Sbjct: 67 LQDLIGFGRRPMQISPEEVYQLTVYQIGAVQAFAQVKGHNLYHVKPHGALYNMAAK 122
>TRUA_PICTO (Q6L0Y7) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 251 Score = 29.3 bits (64), Expect = 6.0 Identities = 20/82 (24%), Positives = 29/82 (35%) Frame = +3 Query: 81 ENFGGVKGKNSSEEALRRWRKLCSVVKNPKRRFRFTANLDKRGEAQAIKHANHEKLRVAV 260 E F KNS E + ++ KN + R N+ G IK + + + Sbjct: 21 EGFDRSNSKNSVESVIINVLSEYNITKNIESAARTDKNVSAAGNVFYIKTEERPEKILGI 80 Query: 261 LVSKAALQFIHGLKLRNEYVVP 326 L F H L N Y+ P Sbjct: 81 LNGNIKNMFFHSYYLSNSYINP 102
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +3 Query: 15 EGARSPPAGEGGREVGMESYLEENFGGVKGKNSSEEA 125 EGA P+GEG EE GG G+ + E+A Sbjct: 40 EGAAKAPSGEGAGAAAKAGATEEASGGRDGEGAGEQA 76
>CC018_MOUSE (Q8BGK9) Protein C3orf18 homolog| Length = 164 Score = 28.9 bits (63), Expect = 7.8 Identities = 22/89 (24%), Positives = 38/89 (42%) Frame = -1 Query: 433 IPATAPWVSNFLLSWPSTMDPSSSAQIWNPAALTSSGTTYSFRSLRPCINCSAAFDTSTA 254 +PAT W S+ L + ++P+++A+ T S T SF R A T Sbjct: 5 VPATQSWFSSHLPTTEPDLEPATAAEGSTTETATLSPETTSFNDTRIPDVAGGAAGVGTM 64 Query: 253 TRSFSWLACLMACASPRLSRLAVKRKRRL 167 SF + + + L +++K+RL Sbjct: 65 LLSFGIITVIGLAVA---MVLYIRKKKRL 90
>AT2B3_RAT (Q64568) Plasma membrane calcium-transporting ATPase 3 (EC 3.6.3.8)| (PMCA3) (Plasma membrane calcium pump isoform 3) (Plasma membrane calcium ATPase isoform 3) Length = 1258 Score = 28.9 bits (63), Expect = 7.8 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Frame = +3 Query: 345 GFQICADELGSIVEGHDSKKLL----THGAVAGIAAKLATSPTDGL 470 GF EL S++E ++ L +G V+G+ +L TSPT+GL Sbjct: 26 GFGCTLAELRSLMELRGAEALQKIQEAYGDVSGLCRRLKTSPTEGL 71
>GIDA_WIGBR (Q8D3K0) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 628 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +3 Query: 309 NEYVVPEEVKAAGFQICADELGSIVEGHDSKKLLTHGAVAGIAA 440 N ++ + + G C +G I +GH K++ G + GIAA Sbjct: 32 NTMLITQNIDTIGQMSCNPSIGGIGKGHLVKEIDAMGGIMGIAA 75 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,480,173 Number of Sequences: 219361 Number of extensions: 1150106 Number of successful extensions: 4555 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 4383 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4537 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
