ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 52 0.001
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.001
3dbj|AK066950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.001
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.001
5gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0... 48 0.017
6gb|AC151359.2| Xenopus tropicalis clone ISB-76H5, complete sequence 46 0.065
7ref|NM_104268.3| Arabidopsis thaliana GTP binding / translation ... 42 1.0
8ref|NM_104265.2| Arabidopsis thaliana GTP binding / translation ... 42 1.0
9ref|XM_469430.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.0
10gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome... 42 1.0
11gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.0
12gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genom... 42 1.0
13dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.0
14gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 geno... 42 1.0
15dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
16dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.0
17ref|NM_001035687.1| Arabidopsis thaliana dopamine beta-monooxyge... 40 4.0
18ref|NM_113435.2| Arabidopsis thaliana dopamine beta-monooxygenas... 40 4.0
19gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 4.0
20gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.0
21gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, comp... 40 4.0
22gb|AY580218.1| Eucidaris tribuloides elongation factor 1 alpha m... 40 4.0
23ref|XM_535440.2| PREDICTED: Canis familiaris similar to MAX-inte... 40 4.0
24ref|XM_572872.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 4.0
25ref|XM_807214.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 4.0
26gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence 40 4.0
27emb|AL353766.8| Human DNA sequence from clone RP11-400A24 on chr... 40 4.0
28emb|AL160279.21| Human DNA sequence from clone RP11-65B23 on chr... 40 4.0
29gb|AC090007.8| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP... 40 4.0
30gb|AC069353.9| Homo sapiens chromosome 8, clone RP11-37B2, compl... 40 4.0
31gb|AC099816.2| Homo sapiens, clone RP11-18K20, complete sequence 40 4.0
32gb|AC022532.13| Homo sapiens chromosome 10 clone RP11-104F15, co... 40 4.0
33gb|AC005906.1| Homo sapiens 12p13.3 BAC RPCI11-429A20 (Roswell P... 40 4.0
34gb|AY057704.1| Arabidopsis thaliana AT3g25290/MJL12_25 mRNA, com... 40 4.0
35emb|BX824171.1|CNS0A5H9 Arabidopsis thaliana Full-length cDNA Co... 40 4.0
36emb|BX823803.1|CNS0A5CJ Arabidopsis thaliana Full-length cDNA Co... 40 4.0
37emb|BX823404.1|CNS0A5BC Arabidopsis thaliana Full-length cDNA Co... 40 4.0
38dbj|AB181417.1| Magnolia stellata DNA, microsatellite marker stm... 40 4.0
39gb|AC093735.2| Homo sapiens BAC clone RP11-17E2 from 4, complete... 40 4.0
40dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 40 4.0
41gb|BT002214.1| Arabidopsis thaliana At3g25290/MJL12_25 mRNA, com... 40 4.0 
>gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0073N20 BAC genomic
             sequence, complete sequence
          Length = 147289

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 47    catggaagatctgcgcgagctggctcacgggatagaggactgcatcgacagcctcatgta 106
             |||||| || || |||||||| || ||||| || ||||||||||||||| || || ||||
Sbjct: 76519 catggaggacctccgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgta 76578

                   
Query: 107   ccgcgc 112
             ||||||
Sbjct: 76579 ccgcgc 76584



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                   
Query: 34  tgctgctcctgtccatggaagatctgcgcgagctggctcacgggatagaggactgc 89
           ||||||| |||||||| ||||| || ||||| ||||||| ||  ||||||||||||
Sbjct: 140 tgctgctgctgtccatcgaagagcttcgcgacctggctcgcgacatagaggactgc 85
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                           
Query: 47      catggaagatctgcgcgagctggctcacgggatagaggactgcatcgacagcctcatgta 106
               |||||| || || |||||||| || ||||| || ||||||||||||||| || || ||||
Sbjct: 6467711 catggaggacctccgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgta 6467652

                     
Query: 107     ccgcgc 112
               ||||||
Sbjct: 6467651 ccgcgc 6467646



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                       
Query: 34      tgctgctcctgtccatggaagatctgcgcgagctggctcacgggatagaggactgc 89
               ||||||| |||||||| ||||| || ||||| ||||||| ||  ||||||||||||
Sbjct: 6544090 tgctgctgctgtccatcgaagagcttcgcgacctggctcgcgacatagaggactgc 6544145
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>dbj|AK066950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090P15, full
           insert sequence
          Length = 3712

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 47  catggaagatctgcgcgagctggctcacgggatagaggactgcatcgacagcctcatgta 106
           |||||| || || |||||||| || ||||| || ||||||||||||||| || || ||||
Sbjct: 499 catggaggacctccgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgta 558

                 
Query: 107 ccgcgc 112
           ||||||
Sbjct: 559 ccgcgc 564
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                           
Query: 47      catggaagatctgcgcgagctggctcacgggatagaggactgcatcgacagcctcatgta 106
               |||||| || || |||||||| || ||||| || ||||||||||||||| || || ||||
Sbjct: 6534178 catggaggacctccgcgagctcgcccacggcatcgaggactgcatcgacggcgtcctgta 6534119

                     
Query: 107     ccgcgc 112
               ||||||
Sbjct: 6534118 ccgcgc 6534113



 Score = 48.1 bits (24), Expect = 0.017
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                       
Query: 34      tgctgctcctgtccatggaagatctgcgcgagctggctcacgggatagaggactgc 89
               ||||||| |||||||| ||||| || ||||| ||||||| ||  ||||||||||||
Sbjct: 6610557 tgctgctgctgtccatcgaagagcttcgcgacctggctcgcgacatagaggactgc 6610612
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>gb|AC119073.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0082N20 BAC genomic
            sequence, complete sequence
          Length = 138826

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                    
Query: 34   tgctgctcctgtccatggaagatctgcgcgagctggctcacgggatagaggactgc 89
            ||||||| |||||||| ||||| || ||||| ||||||| ||  ||||||||||||
Sbjct: 3300 tgctgctgctgtccatcgaagagcttcgcgacctggctcgcgacatagaggactgc 3355
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>gb|AC151359.2| Xenopus tropicalis clone ISB-76H5, complete sequence
          Length = 56452

 Score = 46.1 bits (23), Expect = 0.065
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 80    agaggactgcatcgacagcctcatgta 106
             ||||||||||||| |||||||||||||
Sbjct: 42035 agaggactgcatctacagcctcatgta 42009
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>ref|NM_104268.3| Arabidopsis thaliana GTP binding / translation initiation factor
           AT1G53900 mRNA, complete cds
          Length = 1899

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tgaagcagatggtggtggagg 228
           |||||||||||||||||||||
Sbjct: 687 tgaagcagatggtggtggagg 667
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>ref|NM_104265.2| Arabidopsis thaliana GTP binding / translation initiation factor
           AT1G53880 mRNA, complete cds
          Length = 1948

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tgaagcagatggtggtggagg 228
           |||||||||||||||||||||
Sbjct: 687 tgaagcagatggtggtggagg 667
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>ref|XM_469430.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1584

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  ctgcgcgagctggctcacggg 77
           |||||||||||||||||||||
Sbjct: 930 ctgcgcgagctggctcacggg 950
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>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08
             map R2847, complete sequence
          Length = 100918

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    ctgcgcgagctggctcacggg 77
             |||||||||||||||||||||
Sbjct: 61434 ctgcgcgagctggctcacggg 61454
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 57       ctgcgcgagctggctcacggg 77
                |||||||||||||||||||||
Sbjct: 27925706 ctgcgcgagctggctcacggg 27925726
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>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete
             sequence
          Length = 133889

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    ctgcgcgagctggctcacggg 77
             |||||||||||||||||||||
Sbjct: 99320 ctgcgcgagctggctcacggg 99300
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 57       ctgcgcgagctggctcacggg 77
                |||||||||||||||||||||
Sbjct: 28017030 ctgcgcgagctggctcacggg 28017050
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>gb|AC009324.2| Arabidopsis thaliana chromosome I BAC T18A20 genomic sequence, complete
             sequence
          Length = 85413

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   tgaagcagatggtggtggagg 228
             |||||||||||||||||||||
Sbjct: 63864 tgaagcagatggtggtggagg 63844



 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   tgaagcagatggtggtggagg 228
             |||||||||||||||||||||
Sbjct: 51299 tgaagcagatggtggtggagg 51279
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>dbj|AK108055.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-H10, full
           insert sequence
          Length = 1706

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 57  ctgcgcgagctggctcacggg 77
           |||||||||||||||||||||
Sbjct: 505 ctgcgcgagctggctcacggg 485
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>dbj|AK064270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-E07, full
           insert sequence
          Length = 1586

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  ctgcgcgagctggctcacggg 77
           |||||||||||||||||||||
Sbjct: 932 ctgcgcgagctggctcacggg 952
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>ref|NM_001035687.1| Arabidopsis thaliana dopamine beta-monooxygenase AT3G25290
           transcript variant AT3G25290.2 mRNA, complete cds
          Length = 1391

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 210 gtcttctctgctccgccggc 229
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>ref|NM_113435.2| Arabidopsis thaliana dopamine beta-monooxygenase AT3G25290
           transcript variant AT3G25290.1 mRNA, complete cds
          Length = 1446

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 214 gtcttctctgctccgccggc 233
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>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete
              sequence
          Length = 1178688

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    cccagaagctgcagaggatg 209
              ||||||||||||||||||||
Sbjct: 673612 cccagaagctgcagaggatg 673593
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 265     agacctccggtgctgctccg 284
               ||||||||||||||||||||
Sbjct: 1608399 agacctccggtgctgctccg 1608418
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>gb|AC016814.14| Mus musculus chromosome 1, clone RP23-2M16, complete sequence
          Length = 247961

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    ccctgctgctcctgtccatg 50
             ||||||||||||||||||||
Sbjct: 94168 ccctgctgctcctgtccatg 94187
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>gb|AY580218.1| Eucidaris tribuloides elongation factor 1 alpha mRNA, partial cds
          Length = 1248

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  aagcagatggtggtggaggc 229
            ||||||||||||||||||||
Sbjct: 1189 aagcagatggtggtggaggc 1208
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>ref|XM_535440.2| PREDICTED: Canis familiaris similar to MAX-interacting protein
            (LOC478266), mRNA
          Length = 10702

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 200  gcagaggatgaagcagatggtggtggag 227
            ||||||||||||||||| | ||||||||
Sbjct: 5650 gcagaggatgaagcagaagatggtggag 5623
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>ref|XM_572872.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNI02470) partial mRNA
          Length = 2829

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 190  cccagaagctgcagaggatg 209
            ||||||||||||||||||||
Sbjct: 1661 cccagaagctgcagaggatg 1680
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>ref|XM_807214.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510241.124) partial mRNA
          Length = 1539

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 101 catgtaccgcgcgagctggaagca 124
           |||||||||||||| |||||||||
Sbjct: 453 catgtaccgcgcgaactggaagca 476
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>gb|AC110255.10| Mus musculus, clone RP23-274K7, complete sequence
          Length = 170587

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   ggatgaagcagatggtggtg 224
             ||||||||||||||||||||
Sbjct: 11681 ggatgaagcagatggtggtg 11700
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>emb|AL353766.8| Human DNA sequence from clone RP11-400A24 on chromosome 9, complete
              sequence
          Length = 183542

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    atgaagcagatggtggtgga 226
              ||||||||||||||||||||
Sbjct: 136618 atgaagcagatggtggtgga 136637
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>emb|AL160279.21| Human DNA sequence from clone RP11-65B23 on chromosome 9 Contains the 3'
              end of the DAPK1 gene for death-associated protein kinase
              1, the CTSL gene for cathepsin L, a ,eukaryotic translation
              initiation factor 3, subunit 1 alpha, 35kDa (EIF3S1)
              pseudogene, a cathepsin pseudogene and two CpG islands,
              complete sequence
          Length = 170240

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 201    cagaggatgaagcagatggt 220
              ||||||||||||||||||||
Sbjct: 125083 cagaggatgaagcagatggt 125102
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>gb|AC090007.8| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-156J8, complete
            sequence
          Length = 188802

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  ggatgaagcagatggtggtg 224
            ||||||||||||||||||||
Sbjct: 9096 ggatgaagcagatggtggtg 9077
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>gb|AC069353.9| Homo sapiens chromosome 8, clone RP11-37B2, complete sequence
          Length = 170181

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     cagccctgctgctcctgtcc 47
              ||||||||||||||||||||
Sbjct: 152309 cagccctgctgctcctgtcc 152290
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>gb|AC099816.2| Homo sapiens, clone RP11-18K20, complete sequence
          Length = 151460

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cagccctgctgctcctgtcc 47
             ||||||||||||||||||||
Sbjct: 83698 cagccctgctgctcctgtcc 83717
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>gb|AC022532.13| Homo sapiens chromosome 10 clone RP11-104F15, complete sequence
          Length = 208823

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   gaagcagcagtcttctctgc 138
             ||||||||||||||||||||
Sbjct: 32352 gaagcagcagtcttctctgc 32333
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>gb|AC005906.1| Homo sapiens 12p13.3 BAC RPCI11-429A20 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 185952

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    gactgcatcgacagcctcat 103
             ||||||||||||||||||||
Sbjct: 68054 gactgcatcgacagcctcat 68035
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>gb|AY057704.1| Arabidopsis thaliana AT3g25290/MJL12_25 mRNA, complete cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 214 gtcttctctgctccgccggc 233
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>emb|BX824171.1|CNS0A5H9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZB08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1380

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 194 gtcttctctgctccgccggc 213
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>emb|BX823803.1|CNS0A5CJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS77ZE01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1366

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 189 gtcttctctgctccgccggc 208
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>emb|BX823404.1|CNS0A5BC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS33ZE05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1385

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 199 gtcttctctgctccgccggc 218
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>dbj|AB181417.1| Magnolia stellata DNA, microsatellite marker stm0218
          Length = 323

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 113 gagctggaagcagcagtctt 132
           ||||||||||||||||||||
Sbjct: 236 gagctggaagcagcagtctt 217
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>gb|AC093735.2| Homo sapiens BAC clone RP11-17E2 from 4, complete sequence
          Length = 111389

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     ccacggagcagccctgctgctcct 43
              |||||||||| |||||||||||||
Sbjct: 108769 ccacggagcacccctgctgctcct 108792
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>dbj|AB026647.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12
          Length = 81542

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 128   gtcttctctgctccgccggc 147
             ||||||||||||||||||||
Sbjct: 78072 gtcttctctgctccgccggc 78091
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>gb|BT002214.1| Arabidopsis thaliana At3g25290/MJL12_25 mRNA, complete cds
          Length = 1182

 Score = 40.1 bits (20), Expect = 4.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 gtcttctctgctccgccggc 147
           ||||||||||||||||||||
Sbjct: 196 gtcttctctgctccgccggc 215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,948
Number of Sequences: 3902068
Number of extensions: 2877948
Number of successful extensions: 55131
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54924
Number of HSP's gapped (non-prelim): 207
length of query: 307
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 285
effective length of database: 17,147,199,772
effective search space: 4886951935020
effective search space used: 4886951935020
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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