Clone Name | bastl04e10 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_195183.1| Oryza sativa (japonica cultivar-group) putative cytosolic tRNA-Ala synthetase (OSJNBb0022I16.5), mRNA Length = 1056 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 54 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 113 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 114 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 173 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 174 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 233 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 234 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 293 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 294 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 343
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15, complete sequence Length = 156023 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 155130 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 155189 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 155190 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 155249 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 155250 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 155309 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 155310 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 155369 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 155370 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 155419 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgccgccgccatccgcctc 57 |||||||||||||||||||| Sbjct: 9054 ccgccgccgccatccgcctc 9035
>gb|AC091238.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0022I16, complete sequence Length = 127068 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 46557 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 46616 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 46617 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 46676 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 46677 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 46736 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 46737 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 46796 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 46797 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 46846
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5283359 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5283418 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5283419 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5283478 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5283479 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5283538 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5283539 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5283598 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5283599 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 5283648 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctaccgctaccg 109 |||||||||||||||||| ||||| |||| Sbjct: 22310116 caccgccgccgccaccgccaccgccaccg 22310088 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 gtcaccgccgccgccaccgct 99 ||||||||||||||||||||| Sbjct: 6506409 gtcaccgccgccgccaccgct 6506389 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gccaccgccgccgccatccgcctc 57 ||||||||||||||||||| |||| Sbjct: 17571436 gccaccgccgccgccatcctcctc 17571413 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgccgccgccatccgcctc 57 |||||||||||||||||||| Sbjct: 5137283 ccgccgccgccatccgcctc 5137264 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctaccgc 104 |||||||||||||||||| ||||| Sbjct: 4342615 caccgccgccgccaccgccaccgc 4342592
>dbj|AK066368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059M16, full insert sequence Length = 3214 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 200 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 259 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 260 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 319 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 320 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 379 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 380 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 439 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 440 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 489
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 377 bits (190), Expect = e-101 Identities = 265/290 (91%) Strand = Plus / Plus Query: 174 cttcttcaagtccaagtcgcacacgccatggccgtcgagccccgtggtacccgtcgacga 233 ||||||| |||||||||| ||||||| |||||||| |||||||| || ||||||||||| Sbjct: 5284146 cttcttcgagtccaagtcccacacgcggtggccgtccagccccgtcgtccccgtcgacga 5284205 Query: 234 ccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct: 5284206 ccccacgctgctgttcgccaacgccgggatgaaccagttcaagccggtcttcctcggcac 5284265 Query: 294 cgcctccccggactcacagcttggccgcctgagccgcgcctgcaacacccagaagtgcat 353 |||| |||||||| | | ||| |||||||| |||||||||||||||||||||||||||| Sbjct: 5284266 cgccgccccggacgcgccgctgggccgcctccgccgcgcctgcaacacccagaagtgcat 5284325 Query: 354 ccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacac 413 ||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||| Sbjct: 5284326 ccgcgccggggggaagcacaacgacctcgacgacgtcgggaaggacacctaccaccacac 5284385 Query: 414 ctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5284386 cttcttcgagatgctcgggaactggtccttcggggactacttcaaggagg 5284435 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctaccgctaccg 109 |||||||||||||||||| ||||| |||| Sbjct: 22322184 caccgccgccgccaccgccaccgccaccg 22322156 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 gtcaccgccgccgccaccgct 99 ||||||||||||||||||||| Sbjct: 6508795 gtcaccgccgccgccaccgct 6508775 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 gccaccgccgccgccatccgcctc 57 ||||||||||||||||||| |||| Sbjct: 17580476 gccaccgccgccgccatcctcctc 17580453 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ccgccgccgccatccgcctc 57 |||||||||||||||||||| Sbjct: 5138070 ccgccgccgccatccgcctc 5138051 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctaccgc 104 |||||||||||||||||| ||||| Sbjct: 4343436 caccgccgccgccaccgccaccgc 4343413
>gb|AY104750.1| Zea mays PCO077049 mRNA sequence Length = 3244 Score = 281 bits (142), Expect = 1e-72 Identities = 232/262 (88%) Strand = Plus / Plus Query: 202 tggccgtcgagccccgtggtacccgtcgacgaccccacgctcttgttcgccaacgccggg 261 ||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| || Sbjct: 228 tggccgtcgagtcccgtggtccccgtcgacgaccccacgctgctgttcgccaacgctgga 287 Query: 262 atgaaccagttcaagcccgtattcctcggcaccgcctccccggactcacagcttggccgc 321 ||||||||||||||||| || ||||||||||| || | |||||||| | ||| |||||| Sbjct: 288 atgaaccagttcaagccggtcttcctcggcacagcggcgccggactcgccgctcggccgc 347 Query: 322 ctgagccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgacctt 381 ||| ||| ||||| |||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 348 ctgcaccgtgcctgtaacacccaaaagtgcatccgcgccggcgggaagcacaacgacctc 407 Query: 382 gacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtcc 441 |||||||||||||| ||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 408 gacgacgtggggaatgacacctaccaccataccttcttcgagatgcttgggaactggtct 467 Query: 442 ttcggagactacttcaaggagg 463 ||||| ||||| |||||||||| Sbjct: 468 ttcggggactatttcaaggagg 489
>dbj|AK111163.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B04, full insert sequence Length = 3036 Score = 143 bits (72), Expect = 6e-31 Identities = 111/124 (89%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 ||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| || Sbjct: 309 caacacccagaagtgcatccgcgccggtggcaagcacaacgatctcgacgatgtgggcaa 368 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||||| |||||||||||||| ||||||||| | || |||||||| ||||| |||||||| Sbjct: 369 ggacagctaccaccacaccttcttcgagatgatgggcaactggtctttcggcgactactt 428 Query: 456 caag 459 |||| Sbjct: 429 caag 432
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 133 bits (67), Expect = 6e-28 Identities = 103/115 (89%) Strand = Plus / Minus Query: 338 acacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaagg 397 |||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | Sbjct: 2171056 acacccagaagtgcatccgcgcttccggcaagcacaacgaccttgaagacgtggggcgcg 2170997 Query: 398 acacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagacta 452 | || ||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 2170996 atacctaccaccacacctttttcgagatgctcggcaactggtcgttcggcgacta 2170942 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||| ||||||||||||||| Sbjct: 2171128 ccaacgccggcatgaaccagttcaag 2171103
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 1350746 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 1350687 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 1350686 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 1350627 Query: 457 aag 459 ||| Sbjct: 1350626 aag 1350624 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 228 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 278 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 1350855 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 1350805
>ref|NM_209812.1| Eremothecium gossypii ADR363Cp (ADR363C), mRNA Length = 2871 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| |||||||| ||||| || |||||||||||||||||||| || ||||| ||| | Sbjct: 223 aacacgcagaagtgtatccgggcgggcggcaagcacaacgacctggaggacgttgggctg 282 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||||||||||| || ||||||||||| || |||||||| ||||| ||||||||| Sbjct: 283 gactcgtaccaccacacgttcttcgagatgctgggtaactggtctttcggcgactacttc 342 Query: 457 aag 459 ||| Sbjct: 343 aag 345 Score = 77.8 bits (39), Expect = 3e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 228 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcc 278 ||||||||||||||| ||||| || |||||||||||||||||||||||||| Sbjct: 114 cgacgaccccacgctgttgtttgcgaacgccgggatgaaccagttcaagcc 164
>ref|XM_318757.2| Anopheles gambiae str. PEST ENSANGP00000013174 (ENSANGG00000010685), partial mRNA Length = 2898 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| |||||||||||||| |||||||||||||||||||| || |||||||| || || Sbjct: 204 caacacgcagaagtgcatccgtgccggcggcaagcacaacgatctggacgacgtcggcaa 263 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| |||||| ||||| || ||||||||||| || |||||||| || || |||||||| Sbjct: 264 ggatgtgtaccatcacacgttcttcgagatgctgggcaactggtcgtttggcgactactt 323 Query: 456 caag 459 |||| Sbjct: 324 caag 327 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 245 tgttcgccaacgccgggatgaaccagttcaagcc 278 |||||||||| || || ||||||||||||||||| Sbjct: 113 tgttcgccaatgcgggcatgaaccagttcaagcc 146
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 107 bits (54), Expect = 3e-20 Identities = 87/98 (88%) Strand = Plus / Minus Query: 363 cggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcga 422 |||||||||||||||||| || || |||||| | |||||||||||||||||||| ||||| Sbjct: 1925776 cggcaagcacaacgacctggaggaggtggggcacgacacgtaccaccacaccttcttcga 1925717 Query: 423 gatgctcgggaactggtccttcggagactacttcaagg 460 |||||| || |||||| |||||| ||||||||||||| Sbjct: 1925716 gatgctgggcaactggagcttcggcgactacttcaagg 1925679
>ref|NM_001031056.1| Gallus gallus alanyl-tRNA synthetase like (AARSL), mRNA Length = 3367 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 427 ctcgggaactggtccttcggagactacttcaaggagg 463 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 259 gggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>emb|AJ720883.1| Gallus gallus mRNA for hypothetical protein, clone 28n18 Length = 3367 Score = 97.6 bits (49), Expect = 3e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||| ||||| || |||||||| ||||| |||||||||||||| ||||||||| Sbjct: 355 aagcacaatgacctggaggacgtgggccgtgacacctaccaccacaccttcttcgagatg 414 Query: 427 ctcgggaactggtccttcggagactacttcaaggagg 463 || |||||||||||||| || |||||||||||||||| Sbjct: 415 ctggggaactggtcctttggggactacttcaaggagg 451 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 259 gggatgaaccagttcaagcccgtattcctcggcac 293 ||||||||||||||||||||||| ||||| ||||| Sbjct: 247 gggatgaaccagttcaagcccgttttcctgggcac 281
>ref|NM_205934.1| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RB, transcript variant B (Aats-ala), mRNA Length = 3290 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 433 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 492 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 493 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 552 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 326 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 385 Query: 289 ggcaccgc 296 |||||||| Sbjct: 386 ggcaccgc 393
>ref|NM_078787.2| Drosophila melanogaster Alanyl-tRNA synthetase CG13391-RA, transcript variant A (Aats-ala), mRNA Length = 3151 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 294 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 353 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 354 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 413 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 187 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 246 Query: 289 ggcaccgc 296 |||||||| Sbjct: 247 ggcaccgc 254
>gb|AY069255.1| Drosophila melanogaster GM03058 full length cDNA Length = 3308 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 434 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 493 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || ||||| ||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 494 ggatgtctatcaccataccttctttgaaatgctgggaaactggtccttcggtgactactt 553 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 327 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 386 Query: 289 ggcaccgc 296 |||||||| Sbjct: 387 ggcaccgc 394
>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone BACR02I15, complete sequence Length = 186490 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 3407 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 3348 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 3347 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 3288 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 3514 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 3455 Query: 289 ggcaccgc 296 |||||||| Sbjct: 3454 ggcaccgc 3447
>gb|AC092220.1|AC092220 Drosophila melanogaster, chromosome 2L, region 28B-29X, BAC clone BACR15P08, complete sequence Length = 170649 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 24495 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 24554 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 24555 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 24614 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 24388 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 24447 Query: 289 ggcaccgc 296 |||||||| Sbjct: 24448 ggcaccgc 24455
>gb|AF188718.1|AF188718 Drosophila melanogaster alanyl-tRNA synthetase (alaS) mRNA, complete cds Length = 3117 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 275 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 334 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 335 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 394 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 168 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 227 Query: 289 ggcaccgc 296 |||||||| Sbjct: 228 ggcaccgc 235
>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete sequence Length = 308031 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 19569 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 19510 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 19509 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 19450 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 19676 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 19617 Query: 289 ggcaccgc 296 |||||||| Sbjct: 19616 ggcaccgc 19609
>gb|AC004423.1|AC004423 Drosophila melanogaster DNA sequence (P1 DS02110 (D147)), complete sequence Length = 79076 Score = 95.6 bits (48), Expect = 1e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| ||||||||||| |||||||| |||||||||||||| || ||||||||||| || Sbjct: 1911 caacacgcagaagtgcattcgcgccggtggcaagcacaacgatctggacgacgtgggcaa 1852 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || || ||||| || |||||||||||||| |||||||| Sbjct: 1851 ggatgtctatcatcacaccttctttgaaatgctgggaaactggtccttcggtgactactt 1792 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 229 gacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctc 288 ||||| |||||||| ||||||||||||||||| ||||| |||||||||||| | || || Sbjct: 2018 gacgatcccacgctgttgttcgccaacgccggcatgaatcagttcaagcccatttttctg 1959 Query: 289 ggcaccgc 296 |||||||| Sbjct: 1958 ggcaccgc 1951
>ref|XM_756287.1| Ustilago maydis 521 hypothetical protein (UM05233.1) partial mRNA Length = 2973 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 346 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 405 ||||||||||| || || || ||||| |||||||| |||||||| || |||||||| ||| Sbjct: 271 aagtgcatccgtgcaggtggtaagcataacgacctcgacgacgttggcaaggacacctac 330 Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||| ||||||||||| ||||| || |||||||| || || || ||||||||| Sbjct: 331 caccatacctttttcgaaatgctgggcaactggtcgtttggcgattacttcaag 384 Score = 44.1 bits (22), Expect = 0.40 Identities = 40/46 (86%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggca 292 |||||||||||||| |||||||||| ||| ||| | ||||| |||| Sbjct: 172 ttcgccaacgccggtatgaaccagtacaaacccatcttccttggca 217
>gb|AC125476.30| Medicago truncatula clone mth2-10e13, complete sequence Length = 153919 Score = 87.7 bits (44), Expect = 3e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 331 gcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtg 390 |||||||| | ||||||||| ||||| || || || |||||||| || ||||| |||||| Sbjct: 107106 gcctgcaatatccagaagtgtatccgagcaggtggtaagcacaatgatcttgatgacgtg 107165 Query: 391 gggaaggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagac 450 ||||| ||||| ||||| ||||| || || |||||||| || ||||||||||| || || Sbjct: 107166 gggaaagacacttaccatcacactttctttgagatgcttggtaactggtcctttggcgat 107225 Query: 451 tacttcaa 458 |||||||| Sbjct: 107226 tacttcaa 107233 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 259 gggatgaaccagttcaagcc 278 |||||||||||||||||||| Sbjct: 107034 gggatgaaccagttcaagcc 107053
>ref|XM_500483.1| Yarrowia lipolytica CLIB122, YALI0B04180g predicted mRNA Length = 2883 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 346 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 405 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 232 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 291 Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 292 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 346 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 235 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 121 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 179
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 96/115 (83%) Strand = Plus / Minus Query: 346 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 405 |||||||| || ||||| || ||||||||||| || || || ||||| ||| ||||| Sbjct: 553191 aagtgcattcgagccggaggaaagcacaacgatctggatgatgtgggacgagactcgtac 553132 Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 ||||||||||| ||||||||||| || |||||||| || || ||||||||||||| Sbjct: 553131 caccacaccttcttcgagatgctgggcaactggtcgtttggcgactacttcaagg 553077 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 235 cccacgctcttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 ||||| || ||||| ||||||||||| |||||||||| ||||||| | ||||| ||||| Sbjct: 553302 cccaccctgttgtttgccaacgccggtatgaaccagtacaagcccattttcctgggcac 553244
>ref|XM_588170.2| PREDICTED: Bos taurus similar to Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS) (LOC510933), mRNA Length = 3299 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| |||||||||||||| || |||||||| ||||| ||||| || |||||||| || Sbjct: 245 caacactcagaagtgcatccgggctggcggcaaacacaatgacctggatgacgtgggcaa 304 Query: 396 ggacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactactt 455 ||| || || |||||||| || |||||||| || ||||||||| ||||| ||||| Sbjct: 305 ggatgtctatcatcacaccttctttgagatgctgggctcctggtcctttggagattactt 364 Query: 456 caagga 461 |||||| Sbjct: 365 caagga 370
>ref|XM_687602.1| PREDICTED: Danio rerio similar to LOC443692 protein (LOC564258), mRNA Length = 2922 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 402 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 250 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 309 Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 310 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 367
>emb|BX571958.11| Zebrafish DNA sequence from clone DKEY-240E12 in linkage group 22, complete sequence Length = 221392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Minus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 402 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 45416 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 45357 Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 45356 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 45299
>emb|CR769772.26| Zebrafish DNA sequence from clone CH211-12H2 in linkage group 2, complete sequence Length = 212945 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 402 |||||||| |||| || || ||||| ||||| ||||| | || |||||||||||| Sbjct: 132537 cagaagtgtgtccgtgctggaggcaaacacaatgacctacaggatgtggggaaggacgtt 132596 Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 ||||| || ||||| ||||||||||| ||||||||||| ||||| ||||||||||||| Sbjct: 132597 taccatcataccttcttcgagatgctggggaactggtcattcggggactacttcaagg 132654
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 414 |||||||||||||||||||||||||| || |||| || | | || |||||||||| Sbjct: 841512 cgcgccggcggcaagcacaacgacctcgagaacgtcggctacaccgcgcgccaccacacc 841571 Query: 415 tttttcgagatgctcgggaactggtccttcggagactacttcaag 459 || ||||||||||| || |||||||| ||||| |||||||||||| Sbjct: 841572 ttcttcgagatgctgggcaactggtcgttcggcgactacttcaag 841616
>emb|AL590442.1|CNS07EG9 chromosome II of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 197426 Score = 73.8 bits (37), Expect = 4e-10 Identities = 82/97 (84%) Strand = Plus / Minus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||| ||||| || || ||||| |||||||||||||| ||||| | ||| |||||| Sbjct: 181866 aagcacaatgacctggatgatgtgggaaaggacacgtaccatcacacatattttgagatg 181807 Query: 427 ctcgggaactggtccttcggagactacttcaaggagg 463 | ||||| ||||| || |||||||||||||| |||| Sbjct: 181806 atggggaattggtcgtttggagactacttcaaagagg 181770
>ref|XM_381082.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00906.1) partial mRNA Length = 2874 Score = 69.9 bits (35), Expect = 7e-09 Identities = 83/99 (83%) Strand = Plus / Plus Query: 361 ggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttc 420 |||||||||||||| || |||||||| || || ||||| | || |||||||| || ||| Sbjct: 244 ggcggcaagcacaatgatcttgacgatgttggcaaggatagctatcaccacacattcttc 303 Query: 421 gagatgctcgggaactggtccttcggagactacttcaag 459 |||||| | || |||||||| ||||| |||||||||||| Sbjct: 304 gagatgttgggtaactggtctttcggcgactacttcaag 342 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 251 ccaacgccgggatgaaccagttcaagcccgtattcctcggcaccg 295 ||||||| || |||||||||||||||||| | ||||||||||||| Sbjct: 134 ccaacgctggcatgaaccagttcaagcccatcttcctcggcaccg 178
>ref|XM_571590.1| Cryptococcus neoformans var. neoformans JEC21 alanine-tRNA ligase (CNF02520) partial mRNA Length = 3234 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 370 cacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctc 429 |||||||||||||||||||| || |||||||| |||||||| || || || || ||||| Sbjct: 510 cacaacgaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgctt 569 Query: 430 gggaactggtccttcggagactacttcaagg 460 || |||||||| ||||| || || ||||||| Sbjct: 570 ggaaactggtcattcggcgattatttcaagg 600
>emb|AJ720131.1| Gallus gallus mRNA for hypothetical protein, clone 11d4 Length = 3107 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 396 ggacacgtaccaccacacctttttcgagatg 426 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 69.9 bits (35), Expect = 7e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||||||| |||||||||||||||||||||||||||| Sbjct: 5218055 ccagaagtgcgtccgcgccggcggcaagcacaacgacct 5218017 Score = 54.0 bits (27), Expect = 4e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 230 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||||| || ||||| ||||||| |||||||||||||||||| Sbjct: 5218152 acgaccccaccctgctgttcaccaacgcggggatgaaccagttcaag 5218106
>ref|NM_001005836.1| Gallus gallus alanyl-tRNA synthetase (AARS), mRNA Length = 3107 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 336 caacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaa 395 |||||| |||||||||||||| || || ||||||||||| ||||| || || ||||| || Sbjct: 322 caacactcagaagtgcatccgagctgggggcaagcacaatgacctggatgatgtgggaaa 381 Query: 396 ggacacgtaccaccacacctttttcgagatg 426 ||| |||||||||||||| ||||||||| Sbjct: 382 ggatgtctaccaccacaccttcttcgagatg 412
>gb|BC033273.1| Mus musculus alanyl-tRNA synthetase, mRNA (cDNA clone MGC:25868 IMAGE:4196789), complete cds Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 460 ga 461 || Sbjct: 652 ga 653 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>ref|NM_146217.3| Mus musculus alanyl-tRNA synthetase (Aars), mRNA Length = 4891 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 532 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 591 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 592 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 651 Query: 460 ga 461 || Sbjct: 652 ga 653 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 439 ttcgccaacgctggcatgaaccagttcaa 467
>gb|AY223875.1| Mus musculus alanyl-tRNA synthase (Aars) mRNA, complete cds Length = 3654 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 597 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 656 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 657 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 716 Query: 460 ga 461 || Sbjct: 717 ga 718 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 504 ttcgccaacgctggcatgaaccagttcaa 532
>dbj|AK158139.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930035D01 product:alanyl-tRNA synthetase, full insert sequence Length = 3677 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 606 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 665 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 666 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 725 Query: 460 ga 461 || Sbjct: 726 ga 727 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 513 ttcgccaacgctggcatgaaccagttcaa 541
>dbj|AK150227.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530145P07 product:alanyl-tRNA synthetase, full insert sequence Length = 3639 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 585 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 644 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 645 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 704 Query: 460 ga 461 || Sbjct: 705 ga 706 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 492 ttcgccaacgctggcatgaaccagttcaa 520
>dbj|AK052744.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630041L13 product:similar to ALARS A [Caenorhabditis elegans], full insert sequence Length = 2222 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 326 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 385 Query: 460 ga 461 || Sbjct: 386 ga 387 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>dbj|AK044451.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930013P06 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3463 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 408 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 467 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 468 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 527 Query: 460 ga 461 || Sbjct: 528 ga 529 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 315 ttcgccaacgctggcatgaaccagttcaa 343
>dbj|AK085725.1| Mus musculus 10 days lactation, adult female mammary gland cDNA, RIKEN full-length enriched library, clone:D730028M10 product:ALANYL-TRNA SYNTHETASE (EC 6.1.1.7) (ALANINE--TRNA LIGASE) (ALARS) homolog [Homo sapiens], full insert sequence Length = 3653 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 598 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 657 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || || |||||||| || |||||| || || ||||| |||||| Sbjct: 658 gtctaccaccacactttctttgagatgctgggctcctggtcttttggggactatttcaag 717 Query: 460 ga 461 || Sbjct: 718 ga 719 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 505 ttcgccaacgctggcatgaaccagttcaa 533
>dbj|AB097816.1| Mesocricetus auratus mRNA for alanyl trna synthetase, complete cds Length = 2907 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||| ||||||||||| || || ||||| |||||| Sbjct: 214 acccagaaatgcatccgtgctgggggcaaacacaacgacctggatgatgtgggcaaggac 273 Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||||| || |||||||| || |||||| || ||||| || |||||| Sbjct: 274 gtctaccaccacaccttctttgagatgctgggctcctggtcttttggagattatttcaag 333 Query: 460 ga 461 || Sbjct: 334 ga 335
>ref|XM_214690.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase (predicted) (Aars_predicted), mRNA Length = 3639 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| ||||| ||||| ||||| ||||| || |||||||| || || Sbjct: 590 acccagaagtgcatccgagccgggggcaaacacaatgacctggatgacgtgggcaaagat 649 Query: 400 acgtaccaccacacctttttcgagatgct 428 |||||||||||||| || |||||||| Sbjct: 650 gtctaccaccacaccttctttgagatgct 678 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 497 ttcgccaacgcaggcatgaaccagttcaa 525
>gb|AC093451.25| Mus musculus strain C57BL/6J chromosome 8 clone rp23-340n2, complete sequence Length = 198760 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 80695 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 80754 Query: 400 acgtaccaccacacctttttcgagatgct 428 ||||||||||| || || |||||||| Sbjct: 80755 gtctaccaccacactttctttgagatgct 80783
>gb|AC140276.3| Mus musculus BAC clone RP23-336J13 from 8, complete sequence Length = 211518 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 166511 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 166570 Query: 400 acgtaccaccacacctttttcgagatgct 428 ||||||||||| || || |||||||| Sbjct: 166571 gtctaccaccacactttctttgagatgct 166599
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 296393 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 296334
>gb|AC084046.13| Trypanosoma brucei chromosome 6 clone RPCI93-3D8, complete sequence Length = 154240 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 89540 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 89481
>ref|XM_821287.1| Trypanosoma brucei TREU927 clone RPCI93-3D8 alanyl-tRNA synthetase (Tb927.6.700) partial mRNA Length = 2901 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||||||| | ||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 250 aagcacaacgacttggacgacgtgggccgcgacacgtaccaccacaccttttttgagatg 309
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 ||||||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1821452 caccacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1821507 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1821401 cgcgccggcggcaagcacaacgacct 1821426
>dbj|AK036738.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830169C09 product:alanyl-tRNA synthetase, full insert sequence Length = 4191 Score = 63.9 bits (32), Expect = 4e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 |||||||| |||||||| || || ||||||||||||||||| || |||||||| ||||| Sbjct: 266 acccagaaatgcatccgagctgggggcaagcacaacgacctggatgacgtgggcaaggat 325 Query: 400 acgtaccaccacacctttttcgagatgc 427 ||||||||||| || || ||||||| Sbjct: 326 gtctaccaccacactttctttgagatgc 353 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 173 ttcgccaacgctggcatgaaccagttcaa 201
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||||||| | ||||| ||||| || |||||||| ||||| |||||||||||| Sbjct: 5207769 acgtaccaccacaccatgttcgaaatgctgggcaactggtcattcggtgactacttcaag 5207710
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||| ||||| |||||||| |||||||| ||||| ||||| |||||| Sbjct: 1996654 ccaccacaccttcttcgaaatgctcggcaactggtcgttcggcgactatttcaag 1996708 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 28 ttgctggccaccgccgccgccatcc 52 |||||||| |||||||||||||||| Sbjct: 227048 ttgctggctaccgccgccgccatcc 227072
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 244 ttgttcgccaacgccgggatgaaccagttcaagcccgtattcctcgg 290 |||||| |||||||||||||||||||||||||| ||| |||||||| Sbjct: 3553776 ttgttcaccaacgccgggatgaaccagttcaaggacgttttcctcgg 3553730 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgacct 380 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 3553692 cagaaatgcgtccgcgccggcggcaagcacaacgacct 3553655 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgg 431 ||||||||||| |||||||||||||| Sbjct: 3553629 caccacaccttcttcgagatgctcgg 3553604 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 28 ttgctggccaccgccgccgccatccgcc 55 ||||| |||| ||||||||||||||||| Sbjct: 599171 ttgctcgccatcgccgccgccatccgcc 599144
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 453 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 20443459 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 20443409 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 85 gccgccgccaccgctaccgctaccg 109 ||||||||| ||||||||||||||| Sbjct: 1717825 gccgccgccgccgctaccgctaccg 1717801 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 gtcaccgccgccgccaccgc 98 |||||||||||||||||||| Sbjct: 22189420 gtcaccgccgccgccaccgc 22189439
>dbj|AP005771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0069D13 Length = 157088 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactac 453 |||||||||||||| ||| ||||||| ||||||||||||||||| ||||| Sbjct: 85883 taccaccacaccttcttcaagatgcttaggaactggtccttcggatactac 85833
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 230 acgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||| ||||||||||| ||| |||||||||| ||||||||||||||| Sbjct: 3572278 acgatcccacgctcttattcaccaacgccggtatgaaccagttcaag 3572232
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| ||||||||||| ||||||| |||||||| ||||| |||||| Sbjct: 2184119 caccacaccttcttcgagatgctggggaacttctccttcggcgactatttcaag 2184066
>ref|XM_789424.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl-tRNA synthetase (LOC589790), mRNA Length = 3300 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 386 |||| ||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 220 aacagccagaagtgcatccgtgccggtggcaagcacaatgacctggacga 269 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagccc 279 |||||||| || || |||||||||||||||||| Sbjct: 130 ttcgccaatgcgggtatgaaccagttcaagccc 162
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgacct 380 ||||| ||| |||||||||||||||||||||||||||| Sbjct: 1704450 cagaaatgcgtccgcgccggcggcaagcacaacgacct 1704487
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgacct 380 ||||||||| | |||||||||||||||||||||||||| Sbjct: 4336125 cagaagtgcgtgcgcgccggcggcaagcacaacgacct 4336088 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagg 460 |||||||| || ||||||||| | ||||||| |||||||| ||||||||||||| Sbjct: 4336062 caccacacgttcttcgagatgatggggaacttctccttcggcgactacttcaagg 4336008
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 362 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 421 ||||||||||||||||||| || || || || | ||||| || || || ||| | |||| Sbjct: 1322150 gcggcaagcacaacgacctcgaagaggtaggccatgacacctatcatcataccatgttcg 1322209 Query: 422 agatgctcgggaactggtccttcggagactacttcaag 459 |||||||||| |||||||| ||||| || ||||||||| Sbjct: 1322210 agatgctcggcaactggtcgttcggcgattacttcaag 1322247 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 231 cgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 ||||||||||||| ||||| |||| ||||| ||||| ||||||||| Sbjct: 1322034 cgaccccacgctcatgttcaccaatgccggcatgaatcagttcaag 1322079
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 341 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacga 386 ||||||||||| | || ||||||||||||||||||||||| ||||| Sbjct: 2140860 cccagaagtgcgtgcgggccggcggcaagcacaacgacctggacga 2140815 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 166 ttcatcgacttcttcaagtccaag 189 |||||||||||||||||||||||| Sbjct: 2141020 ttcatcgacttcttcaagtccaag 2140997 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Minus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 |||||||| ||||||||||| || |||| |||||| |||||||||||||||| Sbjct: 2140792 cacaccttcttcgagatgctgggcaacttcagcttcggcgactacttcaaggagg 2140738 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||| ||||||||||||||| Sbjct: 2140935 ccaacgccggcatgaaccagttcaag 2140910 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tgctggccaccgccgccgcc 48 |||||||||||||||||||| Sbjct: 405378 tgctggccaccgccgccgcc 405359
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 376 gaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatgctcgggaac 435 |||||||||||||| || |||||||| |||||||| || || || || ||||| || ||| Sbjct: 731829 gaccttgacgacgtaggaaaggacacttaccaccatactttctttgaaatgcttggaaac 731770 Query: 436 tggtccttcggagactacttcaagg 460 ||||| ||||| || || ||||||| Sbjct: 731769 tggtcattcggcgattatttcaagg 731745
>gb|BC073734.1| Xenopus laevis hypothetical protein LOC443692, mRNA (cDNA clone IMAGE:5085483), partial cds Length = 4625 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||||| || |||||||| ||||||||||||||||| || ||||| ||||| Sbjct: 428 cacaccttctttgagatgcttgggaactggtccttcggggattactttaagga 480
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 ||||| |||||| |||||||||| ||||| ||||||||||||||| Sbjct: 163902 gacccaacgctcctgttcgccaatgccggcatgaaccagttcaag 163946 Score = 50.1 bits (25), Expect = 0.006 Identities = 46/53 (86%) Strand = Plus / Plus Query: 341 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 393 |||||||||| |||| ||||| ||||||||||||||||| || |||||||| Sbjct: 163996 cccagaagtgtgtccgggccggtggcaagcacaacgacctggagaacgtgggg 164048
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1420501 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1420553 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaa 374 |||||||||||||||||||| Sbjct: 1420447 cgcgccggcggcaagcacaa 1420466
>ref|XM_445923.1| Candida glabrata CBS138, CAGL0E05390g partial mRNA Length = 2871 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Plus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 253 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 312 Query: 427 ctcgggaactggtccttcggagactacttcaag 459 | || |||||||||||||| |||||||||||| Sbjct: 313 ttgggtaactggtccttcggtgactacttcaag 345
>emb|AL591788.1|SME591788 Sinorhizobium meliloti 1021 complete chromosome; segment 7/12 Length = 306250 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 462 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 166283 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 166227 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 ||||||||||||||||| |||||||| Sbjct: 166334 cgcgccggcggcaagcataacgacct 166309
>emb|X59957.1|RMRECA R.meliloti recA gene and alaS gene 5' end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 2639 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 462 ||||||||||| |||||||||||||| || | |||||||| ||||| ||||||||| Sbjct: 2291 caccacaccttcttcgagatgctcggcaatttctccttcggcgactatttcaaggag 2347 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 ||||||||||||||||| |||||||| Sbjct: 2240 cgcgccggcggcaagcataacgacct 2265
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 58.0 bits (29), Expect = 3e-05 Identities = 86/105 (81%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacc 414 |||||||||||||||||||||||||| || |||| || | | || |||||| ||| Sbjct: 3072342 cgcgccggcggcaagcacaacgacctggaaaacgtcggctacaccgcgcgccaccatacc 3072283 Query: 415 tttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 3072282 tttttcgagatgctgggcaactggagctttggcgactacttcaag 3072238
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||||| |||||||||||||| |||| || ||||| |||||||||||||| Sbjct: 1947109 cacaccttcttcgagatgctcggcaacttctcgttcggcgactacttcaagga 1947161 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1947055 cgcgccggcggcaagcacaacgacct 1947080 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 gcgccggcggcaagcacaac 375 |||||||||||||||||||| Sbjct: 1809835 gcgccggcggcaagcacaac 1809816
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 228 cgacgaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 ||||||||| ||||| ||||| | |||||||||||||||||||||||| Sbjct: 598556 cgacgacccgacgctgctgttcacgaacgccgggatgaaccagttcaag 598508 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacga 377 ||||||||||||||||||||||| Sbjct: 598444 cgcgccggcggcaagcacaacga 598422
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 58.0 bits (29), Expect = 3e-05 Identities = 77/93 (82%) Strand = Plus / Minus Query: 367 aagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcgagatg 426 |||||||||||| | || || || || |||||| | ||||||||||| || || || ||| Sbjct: 527098 aagcacaacgacttggaggatgtcggtaaggactcctaccaccacactttctttgaaatg 527039 Query: 427 ctcgggaactggtccttcggagactacttcaag 459 | || |||||||||||||| |||||||||||| Sbjct: 527038 ttgggtaactggtccttcggtgactacttcaag 527006
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 9685 ccaccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 9629 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 346 aagtgcatccgcgccggcggcaagcacaacgacct 380 |||||| | |||||||||||||||||||||||||| Sbjct: 9744 aagtgcgttcgcgccggcggcaagcacaacgacct 9710
>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete sequence Length = 152632 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 432 gaactggtccttcggagactacttcaaggagg 463 ||||||||||||||| |||||||||||||||| Sbjct: 130999 gaactggtccttcggggactacttcaaggagg 130968
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 ||||||||||| ||||||||||| || |||| || ||||| |||||||||||||| Sbjct: 3880179 caccacaccttcttcgagatgctgggcaacttctcgttcggcgactacttcaagga 3880234 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacga 377 ||||||||||||||||||||||| Sbjct: 3880128 cgcgccggcggcaagcacaacga 3880150
>gb|AY017381.1| Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 325 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 384 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 385 gacgtggg 392 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AF332359.1|AF332359 Fibrobacter succinogenes S85 alanyl-tRNA synthase gene, partial cds Length = 171 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 325 agccgcgcctgcaacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgac 384 |||||||| ||||||| |||||||||| |||||| ||| |||||||||||||| ||| Sbjct: 64 agccgcgcatgcaacagccagaagtgcctccgcgtgtccggtaagcacaacgacctcgac 123 Query: 385 gacgtggg 392 | |||||| Sbjct: 124 gtcgtggg 131
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagacta 452 ||||| ||||||||||||||||| |||||||| ||||| ||||| Sbjct: 173098 cacacttttttcgagatgctcggtaactggtcgttcggtgacta 173141 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 ||||| ||||| ||||| |||| ||||| ||||||||||||||| Sbjct: 172936 gacccgacgctgctgttcaccaatgccggtatgaaccagttcaag 172980
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 432 gaactggtccttcggagactacttcaaggagg 463 ||||||||||||||| |||||||||||||||| Sbjct: 1471975 gaactggtccttcggggactacttcaaggagg 1471944 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctaccgc 104 |||||||||||||||||| ||||| Sbjct: 35398030 caccgccgccgccaccgccaccgc 35398007
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 341 cccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||||| || | |||||||||||||||||||||||||| Sbjct: 25552 cccagaagagcgttcgcgccggcggcaagcacaacgacct 25591
>emb|BX649641.19| Zebrafish DNA sequence from clone CH211-223O1 in linkage group 18, complete sequence Length = 141018 Score = 56.0 bits (28), Expect = 1e-04 Identities = 100/124 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 99718 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 99777 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 99778 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 99837 Query: 457 aagg 460 |||| Sbjct: 99838 aagg 99841
>emb|X59956.1|RLRECA R.leguminosarum recA gene and alaS gene 5'end for the RecA protein and alanyl-tRNA synthetase, respectively Length = 1841 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 412 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 462 ||||| |||||||||||||| |||| |||||||| ||||| ||||||||| Sbjct: 1500 accttcttcgagatgctcggcaacttctccttcggcgactatttcaaggag 1550 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||| ||||||||||||||||||||| Sbjct: 1443 cgcgtcggcggcaagcacaacgacct 1468
>gb|BC097014.1| Danio rerio zgc:113920, mRNA (cDNA clone IMAGE:7448172), complete cds Length = 1983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 457 aag 459 ||| Sbjct: 428 aag 430
>ref|NM_001040035.1| Danio rerio zgc:113920 (zgc:113920), mRNA Length = 1983 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 308 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 367 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 368 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 427 Query: 457 aag 459 ||| Sbjct: 428 aag 430
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgaccttgacgacgt 389 |||||||||||||||||||||||||| ||| |||| Sbjct: 160237 cgcgccggcggcaagcacaacgacctcgacaacgt 160203
>gb|AE011806.1| Xanthomonas axonopodis pv. citri str. 306, section 184 of 469 of the complete genome Length = 10294 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||| ||||| ||||| |||||||| |||||||| || || |||||||||||| Sbjct: 3094 ccaccataccttcttcgaaatgctcggcaactggtcgtttggcgactacttcaag 3148
>gb|AE012274.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 182 of 460 of the complete genome Length = 10188 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 351 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 405
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||| |||||||||||||| || |||||| ||| || |||||||||||| Sbjct: 615240 ccaccacacttttttcgagatgctgggcaactggagctttggcgactacttcaag 615186
>ref|XM_702496.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 3 (LOC559189), mRNA Length = 3672 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 364 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 423 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 424 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 483 Query: 457 aag 459 ||| Sbjct: 484 aag 486 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 279 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 259 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 306
>ref|XM_679559.1| PREDICTED: Danio rerio similar to Alanyl-tRNA synthetase, transcript variant 1 (LOC559189), mRNA Length = 3613 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 305 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 364 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 365 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 424 Query: 457 aag 459 ||| Sbjct: 425 aag 427 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 279 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 200 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 247
>gb|AF399933.1|AF399933 Xanthomonas campestris RecA gene cluster, complete sequence Length = 3061 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 2913 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 2967
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||| ||||||||| | || |||||||| ||||| || ||||||||| Sbjct: 3038023 ccaccacaccttcttcgagatgttgggcaactggtcgttcggtgattacttcaag 3037969
>gb|AE004524.1| Pseudomonas aeruginosa PAO1, section 85 of 529 of the complete genome Length = 11749 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 9210 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 9248 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 tgttcgccaacgccgggatgaaccagttcaag 276 ||||| ||||||| || ||||||||||||||| Sbjct: 9128 tgttcaccaacgcgggcatgaaccagttcaag 9159
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||||||| | |||||||| ||||||||||||||||| Sbjct: 4161016 ccagaagtgcgtgcgcgccggtggcaagcacaacgacct 4160978 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 245 tgttcgccaacgccgggatgaaccagttcaag 276 ||||| |||||||||| ||||||||||||||| Sbjct: 4161098 tgttcaccaacgccggcatgaaccagttcaag 4161067 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 405 ccaccacacctttttcgagatgct 428 |||||||||||| ||||||||||| Sbjct: 4160953 ccaccacaccttcttcgagatgct 4160930
>gb|AF011922.1|AF011922 Pseudomonas aeruginosa aru gene cluster, ArgR regulatory protein (argR), succinylornithine aminotransferase (aruC), arginine/ornithine succinyltransferase AI subunit (aruF), arginine/ornithine succinyltransferase AII subunit (aruG), succinylglutamate 5-semialdehyde dehydrogenase (aruD), succinylarginine dihydrolase (aruB), succinylglutamate desuccinylase (aruE) genes, complete cds; and alanine tRNA synthetase (alaS) gene, partial cds Length = 12949 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||| ||| | |||||||||||||||||||||||||| Sbjct: 12588 ccagaaatgcgtgcgcgccggcggcaagcacaacgacct 12626 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 245 tgttcgccaacgccgggatgaaccagttcaag 276 ||||| ||||||| || ||||||||||||||| Sbjct: 12506 tgttcaccaacgcgggcatgaaccagttcaag 12537
>gb|BC071378.1| Danio rerio alanyl-tRNA synthetase, mRNA (cDNA clone IMAGE:6895974), partial cds Length = 2471 Score = 54.0 bits (27), Expect = 4e-04 Identities = 99/123 (80%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||||||||| ||||| ||||| || || ||||| || Sbjct: 410 aacacacagaagtgcattcgtgccggcggcaaacacaatgacctcgatgatgtgggcaaa 469 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 470 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 529 Query: 457 aag 459 ||| Sbjct: 530 aag 532 Score = 40.1 bits (20), Expect = 6.2 Identities = 41/48 (85%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaagccc 279 ||||||||||| | |||||||| ||||| |||||||| || |||||| Sbjct: 305 gaccccacgctgctcttcgccaatgccggaatgaaccaatttaagccc 352
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 411 cacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||| ||| |||||||||| |||| |||||||| |||||||||||||| Sbjct: 671126 caccttcttccagatgctcggcaacttctccttcggcgactacttcaagga 671076
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2795393 ccaacgccgggatgaaccagttcaag 2795368
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||| ||||| |||||||||||||| || | |||||||| |||||||||||| Sbjct: 232656 caccataccttcttcgagatgctcggcaatttctccttcggcgactacttcaag 232709 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 341 cccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtgggg 393 ||||||||||| | || ||||| || |||||||||||||| || |||||||| Sbjct: 232591 cccagaagtgcgtgcgggccggggggaagcacaacgacctggagaacgtgggg 232643 Score = 42.1 bits (21), Expect = 1.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 ||||| |||||| | || ||||| ||||| ||||||||||||||| Sbjct: 232497 gacccgacgctcctttttgccaatgccggcatgaaccagttcaag 232541
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| || |||||||||||||| |||| || ||||| |||||||||||| Sbjct: 1524992 caccacacgttcttcgagatgctcggcaacttctcgttcggcgactacttcaag 1525045 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 ||||| |||||||||||||||||||| Sbjct: 1524941 cgcgcgggcggcaagcacaacgacct 1524966
>ref|NM_186912.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4203 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 430 gggaactggtccttcggagactacttcaaggagg 463 |||||||||||||| || |||||||||||||||| Sbjct: 256 gggaactggtcctttggggactacttcaaggagg 289
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1179567 cgcgccggcggcaagcacaacgacct 1179542
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 906195 cgcgccggcggcaagcacaacgacct 906220
>ref|XM_742102.1| Aspergillus fumigatus Af293 alanyl-tRNA synthetase (Afu8g03880) partial mRNA Length = 3036 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 343 cagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacg 402 ||||||||||| || || ||||| || ||||| || | ||||||||||| ||||||| Sbjct: 385 cagaagtgcattcgtgctggcggaaaacacaatgatttggacgacgtgggaaaggacagt 444 Query: 403 taccaccacacctttttcgagatgct 428 |||||||| || || ||||||||||| Sbjct: 445 taccaccatactttcttcgagatgct 470
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 3104360 ccaacgccgggatgaaccagttcaag 3104335
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2980285 ccaacgccgggatgaaccagttcaag 2980260
>ref|XM_790098.1| PREDICTED: Strongylocentrotus purpuratus similar to alanyl tRNA Synthetase (106.8 kD) (ars-2) (LOC590495), partial mRNA Length = 198 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaa 374 |||| ||||||||||||||| ||||| ||||||||||| Sbjct: 76 aacagccagaagtgcatccgtgccggtggcaagcacaa 113
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 594316 ccaacgccgggatgaaccagttcaag 594291 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 405 ccaccacacctttttcgagatgctcgggaact 436 |||||| |||||||||||||||||||| |||| Sbjct: 594177 ccaccatacctttttcgagatgctcggcaact 594146
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 3479205 cgcgccggcggcaagcacaacgacct 3479180 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 86 ccgccgccaccgctaccgctaccg 109 ||||||| |||||||||||||||| Sbjct: 3474906 ccgccgctaccgctaccgctaccg 3474883
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2819915 ccaacgccgggatgaaccagttcaag 2819890
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 362 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 421 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 845829 gcggcaagcacaatgaccttgaagaagtaggacatgatacctaccatcacaccatgttcg 845770 Query: 422 agatgctcgggaactggtccttcggagactacttcaag 459 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 845769 aaatgctgggtaactggtcgttcggtgattacttcaag 845732
>gb|AY994192.1| Cloning vector pSJS1472, complete sequence Length = 9582 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 5270 ccaacgccgggatgaaccagttcaag 5295
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 273291 cgcgccggcggcaagcacaacgacct 273266
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 289268 cgcgccggcggcaagcacaacgacct 289243
>emb|BX640416.1| Bordetella pertussis strain Tohama I, complete genome; segment 6/12 Length = 349354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 194225 cgcgccggcggcaagcacaacgacct 194250
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2820549 ccaacgccgggatgaaccagttcaag 2820524
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| Sbjct: 3141773 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaag 3141720
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 2422314 cgcgccggcggcaagcacaacgacct 2422289 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 cgccggcggcaagcacaacg 376 |||||||||||||||||||| Sbjct: 464923 cgccggcggcaagcacaacg 464904
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgaccttgacgacgtggg 392 ||||||||||||||||||||||| || ||| ||||||| Sbjct: 1319484 cgcgccggcggcaagcacaacgatctcgacaacgtggg 1319521
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 4276034 cgcgccggcggcaagcacaacgacct 4276009
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 583684 cgcgccggcggcaagcacaacgacct 583659
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 430 gggaactggtccttcggagactacttcaaggagg 463 |||||||||||||| || |||||||||||||||| Sbjct: 8975648 gggaactggtcctttggggactacttcaaggagg 8975615 Score = 42.1 bits (21), Expect = 1.6 Identities = 31/33 (93%), Gaps = 1/33 (3%) Strand = Plus / Plus Query: 74 ctacggtcaccgc-cgccgccaccgctaccgct 105 |||| |||||||| ||||||||||||||||||| Sbjct: 14310589 ctactgtcaccgcgcgccgccaccgctaccgct 14310621
>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the complete sequence Length = 10543 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1904 cgcgccggcggcaagcacaacgacct 1929
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2790027 ccaacgccgggatgaaccagttcaag 2790002
>dbj|AP004176.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1057_E05 Length = 103229 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 430 gggaactggtccttcggagactacttcaaggagg 463 |||||||||||||| || |||||||||||||||| Sbjct: 101805 gggaactggtcctttggggactacttcaaggagg 101772
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 6318206 cgcgccggcggcaagcacaacgacct 6318181 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 411 cacctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 462 |||||| |||||||||||||| |||| || ||||| ||||| ||||||||| Sbjct: 6318150 caccttcttcgagatgctcggcaacttctcgttcggcgactatttcaaggag 6318099
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1197675 cgcgccggcggcaagcacaacgacct 1197650
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 362 gcggcaagcacaacgaccttgacgacgtggggaaggacacgtaccaccacacctttttcg 421 ||||||||||||| |||||||| || || || | || || ||||| |||||| | |||| Sbjct: 909185 gcggcaagcacaatgaccttgaagaagtaggacacgatacctaccatcacaccatgttcg 909126 Query: 422 agatgctcgggaactggtccttcggagactacttcaag 459 | ||||| || |||||||| ||||| || ||||||||| Sbjct: 909125 aaatgctgggtaactggtcgttcggtgattacttcaag 909088
>dbj|AP003755.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1354_H07 Length = 157974 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 430 gggaactggtccttcggagactacttcaaggagg 463 |||||||||||||| || |||||||||||||||| Sbjct: 27091 gggaactggtcctttggggactacttcaaggagg 27058
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| ||||| ||||| || |||||||| ||||| ||||| |||||| Sbjct: 3149081 caccacaccttcttcgaaatgctaggcaactggtcgttcggcgactatttcaag 3149028
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 3613113 ccaacgccgggatgaaccagttcaag 3613088
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||||||||| Sbjct: 1194826 cgcgccggcggcaagcacaacgacct 1194801
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 3545821 ccaacgccgggatgaaccagttcaag 3545796
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2675665 ccaacgccgggatgaaccagttcaag 2675640
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 2982983 ccaacgccgggatgaaccagttcaag 2982958
>gb|J01581.1|ECOALAS E. coli alaS gene coding for alanyl-tRNA synthetase Length = 3010 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||||||||||||| Sbjct: 359 ccaacgccgggatgaaccagttcaag 384
>ref|NM_001605.1| Homo sapiens alanyl-tRNA synthetase (AARS), mRNA Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>ref|XM_961372.1| PREDICTED: Tribolium castaneum similar to CG13391-PA, isoform A (LOC654931), mRNA Length = 2898 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| |||||||| ||| | || |||||||| || || |||||||||||| Sbjct: 277 taccaccacacttttttcgaaatgatgggcaactggtcgtttggtgactacttcaag 333
>gb|AE008829.1| Salmonella typhimurium LT2, section 133 of 220 of the complete genome Length = 20371 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 4186 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 4142
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 124801 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 124757
>gb|AC093491.3| Homo sapiens chromosome 16 clone RP11-410N2, complete sequence Length = 162176 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 135115 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 135174 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 135175 gtctatcatcacaccttcttcgagatgct 135203
>dbj|AK222824.1| Homo sapiens mRNA for alanyl-tRNA synthetase variant, clone: HEP06614 Length = 3372 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 321 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 380 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 381 gtctatcatcacaccttcttcgagatgct 409
>gb|AC009060.7|AC009060 Homo sapiens chromosome 16 clone RP11-296I10, complete sequence Length = 180596 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Minus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 178362 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 178303 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 178302 gtctatcatcacaccttcttcgagatgct 178274
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2789323 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2789279
>dbj|AK192606.1| Mus musculus cDNA, clone:Y1G0109G10, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063919, based on BLAT search Length = 226 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||||| |||||||| || || ||||||||||||||||| Sbjct: 178 acccagaaatgcatccgagctgggggcaagcacaacgacct 218 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 ||||||||||| || |||||||||||||| Sbjct: 85 ttcgccaacgctggcatgaaccagttcaa 113
>ref|XM_308772.2| Anopheles gambiae str. PEST ENSANGP00000007670 (ENSANGG00000005781), partial mRNA Length = 2082 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 250 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 306
>ref|XM_308773.2| Anopheles gambiae str. PEST ENSANGP00000024244 (ENSANGG00000005781), partial mRNA Length = 2916 Score = 50.1 bits (25), Expect = 0.006 Identities = 49/57 (85%) Strand = Plus / Plus Query: 403 taccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| || || ||||||||||| || |||||||| ||||| ||||| |||||| Sbjct: 241 taccaccatacattcttcgagatgctgggcaactggtcgttcggggactatttcaag 297
>gb|BC011451.1| Homo sapiens alanyl-tRNA synthetase, mRNA (cDNA clone MGC:9334 IMAGE:3450606), complete cds Length = 3298 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 256 acccagaagtgcatccgggctgggggcaaacataatgacctggacgatgtgggcaaggat 315 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 316 gtctatcatcacaccttcttcgagatgct 344
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2812658 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2812614
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 50.1 bits (25), Expect = 0.006 Identities = 40/45 (88%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagttcaag 276 |||||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 2928314 gaccccactctgttgtttaccaatgccgggatgaaccagttcaag 2928270
>dbj|D32050.1|HUMATS Homo sapiens mRNA for alanyl-tRNA synthetase, complete cds Length = 3344 Score = 50.1 bits (25), Expect = 0.006 Identities = 73/89 (82%) Strand = Plus / Plus Query: 340 acccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggac 399 ||||||||||||||||| || || ||||| || || ||||| ||||| ||||| ||||| Sbjct: 324 acccagaagtgcatccgggctgggggcaaacaaaatgacctggacgatgtgggcaaggat 383 Query: 400 acgtaccaccacacctttttcgagatgct 428 || || |||||||| ||||||||||| Sbjct: 384 gtctatcatcacaccttcttcgagatgct 412
>ref|NM_103905.2| Arabidopsis thaliana ALATS (ALANYL-TRNA SYNTHETASE); ATP binding / alanine-tRNA ligase/ nucleic acid binding AT1G50200 (ALATS) mRNA, complete cds Length = 3397 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 361 ggcggcaagcacaacgaccttgacgacgtggg 392 ||||||||||||||||||||||| ||||||| Sbjct: 2398244 ggcggcaagcacaacgaccttgaaaacgtggg 2398275 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 ||||||||| || || || ||||| || |||| |||||||| |||||||||||||| Sbjct: 2398288 ccaccacacgttctttgaaatgctgggcaacttttccttcggcgactacttcaagga 2398344
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 245 tgttcgccaacgccgggatgaaccagttcaag 276 ||||| ||||||| |||||||||||||||||| Sbjct: 4825401 tgttcaccaacgcggggatgaaccagttcaag 4825370 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||| ||| | |||||||||||||||||||| ||||| Sbjct: 4825319 ccagaaatgcgtgcgcgccggcggcaagcacaatgacct 4825281
>ref|XM_532155.2| PREDICTED: Canis familiaris similar to alanyl-tRNA synthetase like (LOC474920), mRNA Length = 2958 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagcc 278 |||| ||||||||| ||||||||||||||||| Sbjct: 220 ttcgtcaacgccggcatgaaccagttcaagcc 251
>gb|AC007980.1| Arabidopsis thaliana chromosome I BAC F14I3 genomic sequence, complete sequence Length = 100975 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 79244 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 79303
>gb|BT008807.1| Arabidopsis thaliana At1g50200 gene, complete cds Length = 2868 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 292 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 351
>gb|BT008649.1| Arabidopsis thaliana clone RAFL09-78-D07 (R19577) At1g50200 mRNA, complete sequence Length = 3295 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 446 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 505
>gb|BT002526.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 3172 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 431 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 490
>emb|BX571883.3| Zebrafish DNA sequence from clone DKEY-151P17 in linkage group 18, complete sequence Length = 253172 Score = 48.1 bits (24), Expect = 0.026 Identities = 99/124 (79%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaag 396 ||||| ||||||||||| || ||||| ||||| ||||| ||||| || || ||||| || Sbjct: 243575 aacacacagaagtgcattcgtgccggtggcaaacacaatgacctcgatgatgtgggcaaa 243634 Query: 397 gacacgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttc 456 ||| ||||| |||||||| || |||||| | || |||||||| ||||| |||||| Sbjct: 243635 gacgtataccatcacaccttctttgagatgttgggctcttggtcctttggagattacttc 243694 Query: 457 aagg 460 |||| Sbjct: 243695 aagg 243698
>emb|Z22673.1|ATTRNASYA A.thaliana tRNA synthetase Length = 3357 Score = 48.1 bits (24), Expect = 0.026 Identities = 51/60 (85%) Strand = Plus / Plus Query: 400 acgtaccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||| || || ||||| || ||||||||||| ||||| || |||||| Sbjct: 606 acgtaccatcacaccttctttgaaatgcttggtaactggtcctttggagattatttcaag 665
>gb|AE000520.1| Treponema pallidum subsp. pallidum str. Nichols complete genome Length = 1138011 Score = 48.1 bits (24), Expect = 0.026 Identities = 45/52 (86%) Strand = Plus / Minus Query: 412 acctttttcgagatgctcgggaactggtccttcggagactacttcaaggagg 463 ||||||||||||||| | || |||||||| || || || ||||||||||||| Sbjct: 1109499 acctttttcgagatgttgggtaactggtcgttgggcgattacttcaaggagg 1109448
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Minus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| |||||||||||||| |||| || || || |||||||||||| Sbjct: 2329820 cacaccttcttcgagatgctcggcaacttctcgtttggggactacttcaag 2329770
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 227 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 273 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 2872545 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 2872499
>ref|XM_960604.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 46.1 bits (23), Expect = 0.10 Identities = 77/95 (81%) Strand = Plus / Plus Query: 346 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 405 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 406 caccacacctttttcgagatgctcgggaactggtc 440 |||||||| || || |||||| | || |||||||| Sbjct: 142 caccacactttctttgagatgttgggcaactggtc 176
>ref|XM_331764.1| Neurospora crassa OR74A hypothetical protein (NCU02566.1) partial mRNA Length = 2742 Score = 46.1 bits (23), Expect = 0.10 Identities = 77/95 (81%) Strand = Plus / Plus Query: 346 aagtgcatccgcgccggcggcaagcacaacgaccttgacgacgtggggaaggacacgtac 405 |||||||| ||||| || ||||| ||||| || || ||||| || || ||||||| ||| Sbjct: 82 aagtgcattcgcgcgggtggcaaacacaatgatctcgacgatgtcggcaaggacagctac 141 Query: 406 caccacacctttttcgagatgctcgggaactggtc 440 |||||||| || || |||||| | || |||||||| Sbjct: 142 caccacactttctttgagatgttgggcaactggtc 176
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 227 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 273 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 26352 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 26306
>gb|CP000302.1| Shewanella denitrificans OS217, complete genome Length = 4545906 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 406 caccacacctttttcgagatgct 428 ||||||||||||||||||||||| Sbjct: 1411903 caccacacctttttcgagatgct 1411925
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Minus Query: 227 tcgacgaccccacgctcttgttcgccaacgccgggatgaaccagttc 273 |||||||||||| || ||||||| ||||||||||||| ||||||| Sbjct: 103364 tcgacgaccccaacctgttgttcgtcaacgccgggatggtccagttc 103318
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome Length = 3665893 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Plus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 ||||||||||| || |||||||| |||| || ||||| |||||||||||| Sbjct: 2833012 cacaccttttttgaaatgctcggcaacttctctttcggcgactacttcaag 2833062 Score = 40.1 bits (20), Expect = 6.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 341 cccagaagtgcatccgcgccggcggcaagcacaacgacct 380 ||||||| ||| | |||||||||||||| || |||||||| Sbjct: 2832944 cccagaaatgcgtgcgcgccggcggcaaacataacgacct 2832983
>gb|BC114097.1| Bos taurus cDNA clone IMAGE:8167074, partial cds Length = 2474 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgctaccg 109 |||||||||||||||| |||||||||| Sbjct: 211 ccgccgccgccaccgccaccgctaccg 185
>ref|XM_236942.3| PREDICTED: Rattus norvegicus alanyl-tRNA synthetase like (predicted) (Aarsl_predicted), mRNA Length = 2941 Score = 46.1 bits (23), Expect = 0.10 Identities = 41/47 (87%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagcccgtattcctcggcac 293 |||| |||||| || |||||||||||||||||| | ||||| ||||| Sbjct: 205 ttcgtcaacgcaggcatgaaccagttcaagcccatcttcctgggcac 251
>gb|AY142830.1| Heliobacillus mobilis Alanyl-tRNA synthetase gene, partial cds Length = 2649 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 238 acgctcttgttcgccaacgccgggatgaaccagtt 272 ||||| |||||| |||||||||| ||||||||||| Sbjct: 106 acgcttttgttcaccaacgccggcatgaaccagtt 140
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.10 Identities = 44/51 (86%) Strand = Plus / Minus Query: 409 cacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||| ||||||||||| || |||| || ||||| |||||||||||| Sbjct: 2510135 cacaccttcttcgagatgctgggcaacttttcgttcggcgactacttcaag 2510085
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||||||| | || ||||| ||||||||||||||||| Sbjct: 5084075 ccagaagtgcgtgcgtgccggtggcaagcacaacgacct 5084037 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 245 tgttcgccaacgccgggatgaaccagttcaag 276 ||||| ||||||| || ||||||||||||||| Sbjct: 5084157 tgttcaccaacgcaggcatgaaccagttcaag 5084126
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.10 Identities = 35/39 (89%) Strand = Plus / Minus Query: 342 ccagaagtgcatccgcgccggcggcaagcacaacgacct 380 |||||| ||| | ||||| |||||||||||||||||||| Sbjct: 1732602 ccagaaatgcctgcgcgcgggcggcaagcacaacgacct 1732564 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ggccaccgccgccgccatcc 52 |||||||||||||||||||| Sbjct: 135610 ggccaccgccgccgccatcc 135591
>emb|AJ293508.1|GCY293508 Geodia cydonium mRNA for Bcl-x homologous protein (bhp2 gene) Length = 935 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 41 ccgccgccatccgcctctcctcctcgc 67 |||||||| |||||||||||||||||| Sbjct: 344 ccgccgccgtccgcctctcctcctcgc 318
>ref|XM_864778.1| PREDICTED: Bos taurus similar to high-mobility group box 3 (LOC613729), mRNA Length = 1285 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtcg 112 |||||||| ||||||| ||||||||||||| Sbjct: 502 ccgccgccaccaccgccaccgctaccgtcg 531
>gb|BC018662.1| Homo sapiens protein tyrosine phosphatase type IVA, member 2, mRNA (cDNA clone IMAGE:4108553), partial cds Length = 1692 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 259 ccgccgccgccaccgctaccgc 280
>ref|XM_898155.2| PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 4 (Palld), mRNA Length = 5628 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1854 caccgccgccgccaccgctacc 1875
>ref|XM_204283.5| PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 1 (Palld), mRNA Length = 6496 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 2722 caccgccgccgccaccgctacc 2743
>ref|XM_974900.1| PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 6 (Palld), mRNA Length = 4574 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 2722 caccgccgccgccaccgctacc 2743
>ref|XM_921046.2| PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 11 (Palld), mRNA Length = 5628 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1854 caccgccgccgccaccgctacc 1875
>ref|XM_921040.2| PREDICTED: Mus musculus palladin, cytoskeletal associated protein, transcript variant 10 (Palld), mRNA Length = 6496 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 2722 caccgccgccgccaccgctacc 2743
>gb|AC121881.3| Mus musculus BAC clone RP24-134L8 from chromosome 8, complete sequence Length = 184359 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 78923 caccgccgccgccaccgctacc 78902
>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome Length = 1485148 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 358 gccggcggcaagcacaacgaccttga 383 |||||||||||||| ||||||||||| Sbjct: 1440642 gccggcggcaagcataacgaccttga 1440667
>ref|NM_010629.1| Mus musculus kinesin-associated protein 3 (Kifap3), mRNA Length = 3908 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtcggccc 116 |||||||||||||||| ||||| |||| |||||| Sbjct: 33 ccgccgccgccaccgccaccgccaccgacggccc 66
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||| ||||| Sbjct: 921057 cgcgccggcggcaagcacaatgacct 921082
>emb|AL136115.21| Human DNA sequence from clone RP4-534N18 on chromosome 1p34.2-35.3 Contains the PTP4A2 gene for tyrosine phosphatase type IVA, a novel gene and a CpG island, complete sequence Length = 118085 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 68118 ccgccgccgccaccgctaccgc 68097
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 413 cctttttcgagatgctcgggaactggtccttcggagactacttcaaggag 462 |||| ||| ||||||| || |||| |||||||| ||||||||||||||| Sbjct: 2426009 ccttcttccagatgctgggcaacttctccttcggcgactacttcaaggag 2425960
>emb|BX571657.1| Wolinella succinogenes, complete genome; segment 1/7 Length = 347961 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 tgcatccgcgccggcggcaagcacaacgac 378 ||||||||||| || ||||||||||||||| Sbjct: 322375 tgcatccgcgcaggaggcaagcacaacgac 322404
>emb|CR860540.1| Pongo pygmaeus mRNA; cDNA DKFZp459G037 (from clone DKFZp459G037) Length = 2839 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 28 ccgccgccgccaccgctaccgc 7
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 44.1 bits (22), Expect = 0.40 Identities = 28/30 (93%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaa 434 ||||||||||||||| |||||||| ||||| Sbjct: 935207 ccaccacaccttttttgagatgctggggaa 935236 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||| ||||||||||||||| Sbjct: 935068 ccaacgccggcatgaaccagttcaag 935093
>emb|BX470161.8| Zebrafish DNA sequence from clone RP71-84I2, complete sequence Length = 197615 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 ||||||||||||||||| |||||||| Sbjct: 47196 cgcgccggcggcaagcataacgacct 47221 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 405 ccaccacacctttttcgagatgctcgggaactggtccttcggagactacttcaagga 461 |||||||||||| ||||| |||||||| || | ||||| || ||||| |||||||| Sbjct: 47246 ccaccacaccttcttcgaaatgctcggcaatttttcctttggcgactatttcaagga 47302
>ref|NM_028233.1| Mus musculus leucine-rich PPR-motif containing (Lrpprc), mRNA Length = 4571 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 163 caccgccgccgccaccgctacc 184
>ref|NM_080392.2| Homo sapiens protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant 2, mRNA Length = 1952 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 288 ccgccgccgccaccgctaccgc 309
>ref|NM_080391.2| Homo sapiens protein tyrosine phosphatase type IVA, member 2 (PTP4A2), transcript variant 1, mRNA Length = 2158 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 288 ccgccgccgccaccgctaccgc 309
>dbj|AK149663.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530008I23 product:Actin-associated protein palladin (Fragment), full insert sequence Length = 2384 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 599 caccgccgccgccaccgctacc 620
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 355 cgcgccggcggcaagcacaacgacct 380 |||||||||||||||||||| ||||| Sbjct: 3251691 cgcgccggcggcaagcacaatgacct 3251666
>dbj|AK052489.1| Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430036A13 product:ACTIN-ASSOCIATED PROTEIN PALLADIN (FRAGMENT) homolog [Mus musculus], full insert sequence Length = 4544 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 2707 caccgccgccgccaccgctacc 2728
>dbj|AK031696.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030492A02 product:ACTIN-ASSOCIATED PROTEIN PALLADIN (FRAGMENT) homolog [Mus musculus], full insert sequence Length = 3628 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1849 caccgccgccgccaccgctacc 1870
>ref|NM_058880.2| Caenorhabditis elegans Alanyl tRNA Synthetase family member (ars-2) (ars-2) mRNA, complete cds Length = 3472 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 378 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 245 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 286 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagcc 278 ||||||||||| || |||||||| |||||||| Sbjct: 155 ttcgccaacgcgggaatgaaccaattcaagcc 186
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 411 cacctttttcgagatgctcgggaact 436 |||||||||||| ||||||||||||| Sbjct: 3369972 cacctttttcgaaatgctcgggaact 3369947
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 44.1 bits (22), Expect = 0.40 Identities = 46/54 (85%) Strand = Plus / Minus Query: 406 caccacacctttttcgagatgctcgggaactggtccttcggagactacttcaag 459 |||||||||||||| || ||||| ||||| | |||||||| || ||||||||| Sbjct: 340612 caccacaccttttttgaaatgctggggaatttttccttcggcgattacttcaag 340559
>ref|XM_215718.3| PREDICTED: Rattus norvegicus protein kinase C-like 2 (Prkcl2), mRNA Length = 3816 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 ggccgcctgagccgcgcctgca 337 |||||||||||||||||||||| Sbjct: 186 ggccgcctgagccgcgcctgca 207
>gb|U97013.1| Caenorhabditis elegans cosmid F28H1, complete sequence Length = 23536 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 378 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 10511 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 10552
>gb|AF205079.1|AF205079 Mus musculus strain ICR 90 kDa actin-associated protein palladin mRNA, partial cds Length = 1427 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1150 caccgccgccgccaccgctacc 1171
>dbj|AK173081.1| Mus musculus mRNA for mKIAA0992 protein Length = 3581 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1797 caccgccgccgccaccgctacc 1818
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 411 cacctttttcgagatgctcgggaact 436 |||||||||||| ||||||||||||| Sbjct: 927055 cacctttttcgaaatgctcgggaact 927080
>gb|BC027364.1| Mus musculus palladin, cytoskeletal associated protein, mRNA (cDNA clone IMAGE:4947562) Length = 3147 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 1806 caccgccgccgccaccgctacc 1827
>gb|BC076588.1| Mus musculus palladin, cytoskeletal associated protein, mRNA (cDNA clone IMAGE:30615996), partial cds Length = 2684 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 885 caccgccgccgccaccgctacc 906
>dbj|AB027124.1| Mus musculus mRNA for leucine rich protein mLRP130, complete cds Length = 4571 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctacc 102 |||||||||||||||||||||| Sbjct: 163 caccgccgccgccaccgctacc 184
>gb|L48723.1|HUMPTPIVGB Homo sapiens (clone hh13) protein tyrosine phosphatase (ptp-IV1a, PTP-IV1) gene, partial cds Length = 1514 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 105 ccgccgccgccaccgctaccgc 126
>gb|L48937.1|HUMPTPIV1G Homo sapiens (clone hh7-2) ptp-IV1b, PTP-IV1 gene, complete cds Length = 1514 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgc 104 |||||||||||||||||||||| Sbjct: 107 ccgccgccgccaccgctaccgc 128
>gb|U41660.1|CEU41660 Caenorhabditis elegans alanyl-tRNA synthetase-like protein AlaRS A mRNA, complete cds Length = 887 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 337 aacacccagaagtgcatccgcgccggcggcaagcacaacgac 378 ||||| ||||||||||| |||||||| || ||||| |||||| Sbjct: 240 aacacgcagaagtgcattcgcgccggtggaaagcataacgac 281 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 247 ttcgccaacgccgggatgaaccagttcaagcc 278 ||||||||||| || |||||||| |||||||| Sbjct: 150 ttcgccaacgcgggaatgaaccaattcaagcc 181
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 355 cgcgccggcggcaagcacaacgacct 380 ||||| |||||||||||||||||||| Sbjct: 20725 cgcgcgggcggcaagcacaacgacct 20750
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 251 ccaacgccgggatgaaccagttcaag 276 |||||||||||||||| ||||||||| Sbjct: 2830126 ccaacgccgggatgaatcagttcaag 2830151
>dbj|D50367.1| Mus musculus mRNA for KAP3B, complete cds Length = 3908 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtcggccc 116 |||||||||||||||| ||||| |||| |||||| Sbjct: 33 ccgccgccgccaccgccaccgccaccgacggccc 66
>dbj|D50366.1| Mus musculus mRNA for KAP3A, complete cds Length = 3842 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtcggccc 116 |||||||||||||||| ||||| |||| |||||| Sbjct: 33 ccgccgccgccaccgccaccgccaccgacggccc 66
>ref|NM_195378.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0041L14.21), mRNA Length = 612 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 gtcaccgccgccgccaccgct 99 ||||||||||||||||||||| Sbjct: 564 gtcaccgccgccgccaccgct 544
>ref|NM_197866.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.3), mRNA Length = 1190 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctaccgctaccg 109 |||||||||||||||||| ||||| |||| Sbjct: 549 caccgccgccgccaccgccaccgccaccg 577
>ref|XM_464019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2670 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 85 gccgccgccaccgctaccgctaccg 109 ||||||||| ||||||||||||||| Sbjct: 34 gccgccgccgccgctaccgctaccg 58
>gb|AE017128.1| Yersinia pestis biovar Medievalis str. 91001 section 2 of 16 of the complete genome Length = 290803 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 272 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 114314 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 114354
>ref|XM_605523.2| PREDICTED: Bos taurus similar to leucine-rich repeats and calponin homology (CH) domain containing 4 (LOC527134), mRNA Length = 2212 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gccaccgccgccgccatccgc 54 ||||||||||||||||||||| Sbjct: 40 gccaccgccgccgccatccgc 20
>gb|AC142211.3| Mus musculus BAC clone RP24-501B23 from chromosome 8, complete sequence Length = 175636 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 76936 ccgccgccgccaccgccaccgccaccgtc 76908
>gb|BC004240.1| Homo sapiens Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1, mRNA (cDNA clone MGC:10361 IMAGE:3627230), complete cds Length = 1203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cgccgccgccaccgctaccgc 104 ||||||||||||||||||||| Sbjct: 374 cgccgccgccaccgctaccgc 354
>ref|NM_009172.1| Mus musculus seven in absentia 1A (Siah1a), mRNA Length = 1968 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 58 ccgccgccgccaccgccaccgccaccgtc 30
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 272 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 992337 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 992377
>ref|NM_004143.2| Homo sapiens Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1 (CITED1), mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 cgccgccgccaccgctaccgc 104 ||||||||||||||||||||| Sbjct: 374 cgccgccgccaccgctaccgc 354
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 35190254 ccgccgccgccaccgccaccgccaccgtc 35190282 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctacc 102 |||||||||||||||||||| Sbjct: 27332397 ccgccgccgccaccgctacc 27332416 Score = 40.1 bits (20), Expect = 6.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtcggc 114 |||||||||||||||| ||||| |||| |||| Sbjct: 13791483 ccgccgccgccaccgccaccgccaccgccggc 13791514 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 caccgccgccgccaccgctaccgc 104 |||||||||||||||||| ||||| Sbjct: 11682727 caccgccgccgccaccgccaccgc 11682750 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 gccgccgccatccgcctctcctcc 63 ||||||||| |||||||||||||| Sbjct: 3292565 gccgccgccgtccgcctctcctcc 3292588
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 69015 ccgccgccgccaccgccaccgccaccgtc 69043
>ref|XM_988493.1| PREDICTED: Mus musculus hypothetical protein LOC671683 (LOC671683), mRNA Length = 3058 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 519 ccgccgccgccaccgccaccgccaccgtc 547
>ref|XM_987158.1| PREDICTED: Mus musculus hypothetical protein LOC666945 (LOC666945), mRNA Length = 3058 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 519 ccgccgccgccaccgccaccgccaccgtc 547
>ref|XM_538645.2| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 1 (LOC481524), mRNA Length = 1775 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccgccaccgctaccgctaccg 109 ||||||||||||||||||||| Sbjct: 59 ccgccaccgctaccgctaccg 39 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 accgccgccgccaccgctaccgctaccg 109 |||||| |||| |||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>ref|XM_845859.1| PREDICTED: Canis familiaris similar to heterogeneous nuclear ribonucleoprotein A0, transcript variant 2 (LOC481524), mRNA Length = 1961 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 ccgccaccgctaccgctaccg 109 ||||||||||||||||||||| Sbjct: 59 ccgccaccgctaccgctaccg 39 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 82 accgccgccgccaccgctaccgctaccg 109 |||||| |||| |||||||||||||||| Sbjct: 60 accgccaccgctaccgctaccgctaccg 33
>gb|AC099042.9| Oryza sativa chromosome 10 BAC OSJNBa0041L14 genomic sequence, complete sequence Length = 158742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 gtcaccgccgccgccaccgct 99 ||||||||||||||||||||| Sbjct: 95771 gtcaccgccgccgccaccgct 95791
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 272 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 990742 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 990782
>emb|BX842647.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 2/11 Length = 346357 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 ttcgccaacgccgggatgaaccagttcaa 275 |||||||||||||| ||||| |||||||| Sbjct: 121357 ttcgccaacgccggcatgaatcagttcaa 121329
>emb|AL135749.3|HSN14 Homo sapiens chromosome X sequence from BAC CEPHB197N14 region PHKA1-DXS227 map Xq13, complete sequence Length = 156655 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cgccgccgccaccgctaccgc 104 ||||||||||||||||||||| Sbjct: 120456 cgccgccgccaccgctaccgc 120476
>emb|AJ414156.1| Yersinia pestis strain CO92 complete genome; segment 16/20 Length = 220050 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 232 gaccccacgctcttgttcgccaacgccgggatgaaccagtt 272 ||||| ||||| ||||| |||| ||||||||||||||||| Sbjct: 106242 gaccctacgctgttgtttaccaatgccgggatgaaccagtt 106202
>gb|DQ023263.1| Macaca mulatta 17beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) gene, complete cds Length = 40709 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 cgccgccgccaccgctaccgc 104 ||||||||||||||||||||| Sbjct: 17327 cgccgccgccaccgctaccgc 17347
>gb|AC037441.12| Homo sapiens chromosome , clone RP11-87E22, complete sequence Length = 163147 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 97331 ccgccgccgccaccgccaccgccaccgtc 97303
>dbj|AK133050.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930563D01 product:hypothetical Arginine-rich region profile containing protein, full insert sequence Length = 906 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 83 ccgccgccgccaccgctaccgctaccgtc 111 |||||||||||||||| ||||| |||||| Sbjct: 180 ccgccgccgccaccgccaccgccaccgtc 208
>gb|AC087333.2|AC087333 Takifugu rubripes clone 244C11, complete sequence Length = 78437 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 84 cgccgccgccaccgctaccgctaccgtcg 112 ||||||||||||||| ||||| ||||||| Sbjct: 44200 cgccgccgccaccgccaccgccaccgtcg 44172 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,664,054 Number of Sequences: 3902068 Number of extensions: 3664054 Number of successful extensions: 123531 Number of sequences better than 10.0: 402 Number of HSP's better than 10.0 without gapping: 420 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 109069 Number of HSP's gapped (non-prelim): 14424 length of query: 463 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 441 effective length of database: 17,147,199,772 effective search space: 7561915099452 effective search space used: 7561915099452 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)