Clone Information

BLAST Search Result

Clone Name	bastl04e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	36	0.055
2	IF2_CORGL (Q8NP40) Translation initiation factor IF-2	35	0.093
3	IF2_CORDI (Q6NGN2) Translation initiation factor IF-2	34	0.21
4	IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2	32	0.61
5	RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/in...	32	0.61
6	ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein	32	0.79
7	ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain prot...	32	0.79
8	TWST1_MACTO (Q7JGP2) Twist-related protein 1	31	1.3
9	IF2_STRAW (Q82K53) Translation initiation factor IF-2	31	1.3
10	CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Frag...	31	1.3
11	UPPS_MYCLE (P38119) Undecaprenyl pyrophosphate synthetase (EC 2....	31	1.8
12	DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 7...	30	2.3
13	CSP_PLACC (P08673) Circumsporozoite protein precursor (CS)	30	2.3
14	TWST1_EULFU (Q8MIF3) Twist-related protein 1	30	2.3
15	RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X ...	30	2.3
16	ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (1...	30	2.3
17	ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (1...	30	2.3
18	ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (1...	30	2.3
19	MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF...	30	3.0
20	IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2	30	3.0
21	FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chor...	30	3.0
22	ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor	30	3.0
23	SRF_HUMAN (P11831) Serum response factor (SRF)	30	3.0
24	TWST1_GORGO (Q8MI06) Twist-related protein 1	30	3.0
25	DTD_SALTY (P58533) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	30	3.0
26	DTD_SALTI (P58532) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	30	3.0
27	DTD_SALPA (Q5PKE2) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	30	3.0
28	JIP2_HUMAN (Q13387) C-jun-amino-terminal kinase-interacting prot...	30	3.0
29	ARGJ_CAUCR (Q9A3Y4) Arginine biosynthesis bifunctional protein a...	30	3.0
30	PG10_MYCTU (O53810) Hypothetical PE-PGRS family protein PE_PGRS1...	30	3.0
31	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	30	3.0
32	CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit...	30	3.0
33	PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46	30	3.9
34	PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46	30	3.9
35	GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; ...	30	3.9
36	K0157_HUMAN (Q15018) Protein KIAA0157	29	5.1
37	ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Aden...	29	5.1
38	GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.2...	29	5.1
39	GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11...	29	5.1
40	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	29	5.1
41	TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TR...	29	5.1
42	RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif p...	29	5.1
43	RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif p...	29	5.1
44	ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote...	29	5.1
45	TWST1_HYLCO (Q8MIE7) Twist-related protein 1	29	5.1
46	EGR1_RAT (P08154) Early growth response protein 1 (EGR-1) (Krox-...	29	6.7
47	ABP1_RIPCL (Q27905) Probable antibacterial peptide polyprotein	29	6.7
48	GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4) (Endo...	29	6.7
49	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	29	6.7
50	JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)	29	6.7
51	RL4_NITEU (Q82X87) 50S ribosomal protein L4	29	6.7
52	LIPB_DEIRA (Q9RWA5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl...	29	6.7
53	SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100	29	6.7
54	VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Pro...	28	8.7
55	USP_DROME (P20153) Protein ultraspiracle (XR2C) (Chorion factor 1)	28	8.7
56	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	28	8.7
57	GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; ...	28	8.7
58	NIFU_RHOSH (Q01180) Nitrogen fixation protein nifU	28	8.7
59	GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; ...	28	8.7
60	ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger prote...	28	8.7
61	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	28	8.7
62	EVX1_MOUSE (P23683) Homeobox even-skipped homolog protein 1 (EVX-1)	28	8.7
63	LORI_MOUSE (P18165) Loricrin	28	8.7
64	FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)	28	8.7
65	EOMES_HUMAN (O95936) Eomesodermin homolog	28	8.7
66	SEC65_SCHPO (O94407) Signal recognition particle sec65 subunit	28	8.7
67	GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Co...	28	8.7
68	EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear a...	28	8.7
69	TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)	28	8.7

>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 35.8 bits (81), Expect = 0.055
 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -1

Query: 266 GGSNRTPRKVGDSLPGTG-GGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGGAR 99
           GG NR PR  G    G   GG N   R +G G +GP P   AA        + GG+R
Sbjct: 266 GGDNRGPRPAGAGDRGPRPGGDNRGPRPAGAGDRGPRPAPAAAAPSQPPAPAPGGSR 322

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>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 35.0 bits (79), Expect = 0.093
 Identities = 27/77 (35%), Positives = 33/77 (42%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCE 117
           P   G+P    G+ R PR V ++   TGGG  P  R  G    GP P        GG   
Sbjct: 187 PRPMGKPAPKPGA-RAPR-VANNPFSTGGGERPAPRPGG----GPRP--------GGGPR 232

Query: 116 SDGGARIDGEKRPTARR 66
             GG R  G+ RP  +R
Sbjct: 233 PGGGPRPQGQGRPGGQR 249

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>IF2_CORDI (Q6NGN2) Translation initiation factor IF-2|
          Length = 953

 Score = 33.9 bits (76), Expect = 0.21
 Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 6/72 (8%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPG----TGGGSNPVERESGVGGKG--PNPLSPAA*S 135
           P    RP     S   PR  G   PG     GG   P ER    GG+G  P P   +   
Sbjct: 184 PRPAPRPGGGNRSGNAPRPGGGPRPGGNRPQGGQGGPAERAPRPGGRGGQPRPQGGSRSQ 243

Query: 134 CGGNCESDGGAR 99
             G  E  GG R
Sbjct: 244 QSGGQERQGGGR 255

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>IF2_BIFLO (Q8G3Y5) Translation initiation factor IF-2|
          Length = 954

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 25/75 (33%), Positives = 30/75 (40%), Gaps = 1/75 (1%)
 Frame = -1

Query: 290 RRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGG-KGPNPLSPAA*SCGGNCES 114
           R GRP   G     P + G + PG GGGS    +    GG +G           GGN   
Sbjct: 241 RGGRPGQGGQGGPRPGQWGHNRPGQGGGSQGAGQGGARGGFRGGQG--------GGNNFQ 292

Query: 113 DGGARIDGEKRPTAR 69
            GGA  +G  R   R
Sbjct: 293 GGGAPSNGPARGGGR 307

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>RIN3_MOUSE (P59729) Ras and Rab interactor 3 (Ras interaction/interference|
           protein 3)
          Length = 980

 Score = 32.3 bits (72), Expect = 0.61
 Identities = 18/45 (40%), Positives = 20/45 (44%)
 Frame = -1

Query: 278 PDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA 144
           P   G SN+ P K  +SLP    G  P   E    G  PNPL  A
Sbjct: 320 PGPPGHSNQPPMKACESLPRPAVGLGPFGEEEMKPGTTPNPLHQA 364

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>ATX2L_MOUSE (Q7TQH0) Ataxin-2-like protein|
          Length = 1049

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -1

Query: 314 GALR*SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA 141
           G +R S +R GRP  S    R P  + +S PG G  +       G+ G GP+ +SP A
Sbjct: 360 GGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEAR------GING-GPSRMSPKA 410

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>ATX2L_HUMAN (Q8WWM7) Ataxin-2-like protein (Ataxin-2 domain protein)|
           (Ataxin-2-related protein)
          Length = 1075

 Score = 32.0 bits (71), Expect = 0.79
 Identities = 21/58 (36%), Positives = 29/58 (50%)
 Frame = -1

Query: 314 GALR*SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA 141
           G +R S +R GRP  S    R P  + +S PG G  +       G+ G GP+ +SP A
Sbjct: 362 GGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEAR------GING-GPSRMSPKA 412

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>TWST1_MACTO (Q7JGP2) Twist-related protein 1|
          Length = 201

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 25/80 (31%), Positives = 29/80 (36%), Gaps = 7/80 (8%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA-------A* 138
           P R+  P    G     RK   S    GGG+ P     G  G G  P SPA       + 
Sbjct: 24  PDRQQPPSGKRGG----RKRRSSRRSAGGGAGPGGAAGGGVGGGDEPGSPAQGKRGKKSA 79

Query: 137 SCGGNCESDGGARIDGEKRP 78
            CGG   + GG    G   P
Sbjct: 80  GCGGGGSAGGGGSSSGGGSP 99

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 17/42 (40%), Positives = 20/42 (47%)
 Frame = -1

Query: 281 RPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNP 156
           RP  +GG +R PR  G    G GG   P   + G GG  P P
Sbjct: 251 RPQGAGGQDRAPRPQG----GPGGAPRP---QGGPGGARPTP 285

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>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 13/83 (15%)
 Frame = -1

Query: 299 SPTRRGRPDASG--GSNRTPRKVGDSLPGTGG-----------GSNPVERESGVGGKGPN 159
           +P  RG P   G  G+N  P + G  +PGT G           GSN +  E G  G+  +
Sbjct: 453 TPGARGPPGEEGKRGANGEPGQNG--VPGTPGERGSPGFRGLPGSNGLPGEKGPAGERGS 510

Query: 158 PLSPAA*SCGGNCESDGGARIDG 90
           P  P      G+   DGG  + G
Sbjct: 511 PGPPGPSGPAGDRGQDGGPGLPG 533

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>UPPS_MYCLE (P38119) Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) (UPP|
           synthetase) (Di-trans,poly-cis-decaprenylcistransferase)
           (Undecaprenyl diphosphate synthase) (UDS)
          Length = 296

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 26/90 (28%), Positives = 35/90 (38%), Gaps = 7/90 (7%)
 Frame = +1

Query: 211 PPVPGRESPTFRGVR-------LLPPLASGRPRRVGDHRSAPR*ESRTTKAAVGAHSCPH 369
           PP P  + PTF           +LPP   G PRR   H         T+KA     S   
Sbjct: 17  PPAPD-DYPTFPDKSTWPVVFPMLPPSPDGGPRRPPQH---------TSKAVAPRLSAAQ 66

Query: 370 LHLLFVAMMSSSGSEVGERASHR*KGLRIG 459
           L      +M  +G    +R  HR +G ++G
Sbjct: 67  LPTHVAIVMDGNGRWANQRGLHRTEGHKMG 96

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>DNAK_NATPD (Q3IUI0) Chaperone protein dnaK (Heat shock protein 70) (Heat shock|
           70 kDa protein) (HSP70)
          Length = 656

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = -1

Query: 239 VGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGGARIDGE 87
           +G + PG  GG+ P     G+GG GP  +  A    G   + DG   +D +
Sbjct: 598 MGGAGPGGMGGAGP----GGMGGAGPGGMGGAGPGAGAGQQGDGEEFVDAD 644

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>CSP_PLACC (P08673) Circumsporozoite protein precursor (CS)|
          Length = 398

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -1

Query: 269 SGGSNRTPRKVGDSLPGTGG----GSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGGA 102
           +GG+ R          G GG    G+N    E+G GG G N  +  A    G  +++GGA
Sbjct: 252 AGGAGRAGNNAAAGEAGAGGAGRAGNNAAAGEAGAGGAGGNAGNKKA-GDAGQGQNNGGA 310

Query: 101 RIDGEK 84
            +   K
Sbjct: 311 NVPNVK 316

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>TWST1_EULFU (Q8MIF3) Twist-related protein 1|
          Length = 198

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 12/91 (13%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA-------A* 138
           P R+  P    G     RK   S    GGG+ P     GVGG G  P SPA       + 
Sbjct: 24  PDRQQPPSGKRGG----RKRRSSRRSAGGGAGPGGAAGGVGG-GDEPGSPAQGKRGKKSA 78

Query: 137 SCGGNC-----ESDGGARIDGEKRPTARRIA 60
            CGG        S GG+    E+  T R +A
Sbjct: 79  GCGGGAGGGGSSSGGGSPQSYEELQTQRVMA 109

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>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (MHC class I regulatory element-binding protein
           H-2RIIBP)
          Length = 520

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 29/106 (27%), Positives = 34/106 (32%)
 Frame = -1

Query: 458 PILSPFHLCEARSPTSEPLELIMATKRRWRWGHECAPTAAFVVLLSYLGALR*SPTRRGR 279
           P L P H      P     E+      RWR        AA         AL   P   GR
Sbjct: 8   PFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAGEQQALEPEPGEAGR 67

Query: 278 PDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA 141
            D  G S R  R    S P      NP+ +          PL+P+A
Sbjct: 68  -DGMGDSGRDSRSPDSSSP------NPLSQGIRPSSPPGPPLTPSA 106

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>ICP4_EHV1V (Q6S6U0) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +1

Query: 205  DPPPVPGRE--SPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTK---AAVGAHSCPH 369
            D PP P R   +P  +  R L P+ +  P R G  R  PR +  T +   AA  A+  P 
Sbjct: 961  DSPPAPKRRVATPGHQAPRALGPMPAEGPDRRGGFRRVPRGDCHTPRPSDAACAAYCPPE 1020

Query: 370  L 372
            L
Sbjct: 1021 L 1021

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>ICP4_EHV1K (P17473) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +1

Query: 205  DPPPVPGRE--SPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTK---AAVGAHSCPH 369
            D PP P R   +P  +  R L P+ +  P R G  R  PR +  T +   AA  A+  P 
Sbjct: 961  DSPPAPKRRVATPGHQAPRALGPMPAEGPDRRGGFRRVPRGDCHTPRPSDAACAAYCPPE 1020

Query: 370  L 372
            L
Sbjct: 1021 L 1021

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>ICP4_EHV1B (P28925) Trans-acting transcriptional protein ICP4 (155 kDa|
            immediate-early protein)
          Length = 1487

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +1

Query: 205  DPPPVPGRE--SPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTK---AAVGAHSCPH 369
            D PP P R   +P  +  R L P+ +  P R G  R  PR +  T +   AA  A+  P 
Sbjct: 961  DSPPAPKRRVATPGHQAPRALGPMPAEGPDRRGGFRRVPRGDCHTPRPSDAACAAYCPPE 1020

Query: 370  L 372
            L
Sbjct: 1021 L 1021

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>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING|
           finger protein 64)
          Length = 485

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = -1

Query: 224 PGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGGARIDGE 87
           P  GGG    +   G GG+G +     + +CGG+   DG     G+
Sbjct: 43  PRAGGGVGGSDGSDGSGGRGDSGAYDGSGACGGSDACDGSGDSSGD 88

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>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2|
          Length = 880

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 6/78 (7%)
 Frame = -1

Query: 293 TRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGG------KGPNPLSPAA*SC 132
           T   RP++ GG        G+  PG GGG     R  G GG      +GP P        
Sbjct: 151 TGPSRPNSGGGYQ------GNRGPGQGGGGYQGNRGPGQGGGGYQGNRGPGPGQGGGGYQ 204

Query: 131 GGNCESDGGARIDGEKRP 78
           G      GG    G + P
Sbjct: 205 GNRGPGQGGGGYQGNRGP 222

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>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane|
            protein)
          Length = 2038

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -1

Query: 284  GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERES-GVGGKGPNPLSPA 144
            G   A+GG N + R  G S  G GGG       + G G +G +   P+
Sbjct: 889  GGAGAAGGGNASKRAKGSSSAGAGGGVGGANASAGGAGARGSSKKKPS 936

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>ALL1_ARTVU (Q84ZX5) Major pollen allergen Art v 1 precursor|
          Length = 132

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/48 (37%), Positives = 21/48 (43%)
 Frame = -1

Query: 299 SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNP 156
           +P     P A+GGS   P   G   P   GGS PV+     GG  P P
Sbjct: 87  APPGAAPPPAAGGSPSPPADGGSPPPPADGGSPPVD-----GGSPPPP 129

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>SRF_HUMAN (P11831) Serum response factor (SRF)|
          Length = 508

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -1

Query: 314 GALR*SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNP--VERE-SGVGGKGPNPLSPA 144
           G+L  +PT  GRP   GG+       G  +PG G G  P  +ERE +      P P + A
Sbjct: 20  GSLNRTPT--GRPGGGGGTRGAN---GGRVPGNGAGLGPGRLEREAAAAAATTPAPTAGA 74

Query: 143 A*S-CGGNCESDGGARIDGEKRPTARRIA 60
             S   G+ ES     +  E+R   R ++
Sbjct: 75  LYSGSEGDSESGEEEELGAERRGLKRSLS 103

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>TWST1_GORGO (Q8MI06) Twist-related protein 1|
          Length = 203

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCG---G 126
           P R+  P    G     RK   S    GGG+ P    SG  G G  P SPA    G    
Sbjct: 24  PDRQQPPSGKRGG----RKRRSSRRSAGGGAGPGGAASGGAGGGDEPGSPAQGKRGKKSA 79

Query: 125 NCESDGGARIDG 90
            C   GG    G
Sbjct: 80  GCGGGGGGGAGG 91

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>DTD_SALTY (P58533) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 145

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 216 RSGQGIPHLSRRAVASAT--GIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSPFRR 389
           ++G  +  +S+  +A+ T  G+RP+ SGG +P+RA+   +    RCR+  +      F  
Sbjct: 68  QAGGSVLVVSQFTLAADTERGMRPSFSGGAAPDRAQALYEYFVERCRQQAINTQTGRFAA 127

Query: 390 HDELQWFRGG 419
             +++    G
Sbjct: 128 DMQVELVNDG 137

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>DTD_SALTI (P58532) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 145

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 216 RSGQGIPHLSRRAVASAT--GIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSPFRR 389
           ++G  +  +S+  +A+ T  G+RP+ SGG +P+RA+   +    RCR+  +      F  
Sbjct: 68  QAGGSVLVVSQFTLAADTERGMRPSFSGGAAPDRAQALYEYFVERCRQQAINTQTGRFAA 127

Query: 390 HDELQWFRGG 419
             +++    G
Sbjct: 128 DMQVELVNDG 137

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>DTD_SALPA (Q5PKE2) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 145

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 18/70 (25%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
 Frame = +3

Query: 216 RSGQGIPHLSRRAVASAT--GIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSPFRR 389
           ++G  +  +S+  +A+ T  G+RP+ SGG +P+RA+   +    RCR+  +      F  
Sbjct: 68  QAGGSVLVVSQFTLAADTERGMRPSFSGGAAPDRAQALYEYFVERCRQQAINTQTGRFAA 127

Query: 390 HDELQWFRGG 419
             +++    G
Sbjct: 128 DMQVELVNDG 137

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>JIP2_HUMAN (Q13387) C-jun-amino-terminal kinase-interacting protein 2|
           (JNK-interacting protein 2) (JIP-2) (JNK MAP kinase
           scaffold protein 2) (Islet-brain-2) (IB-2)
           (Mitogen-activated protein kinase 8-interacting protein
           2)
          Length = 824

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 22/68 (32%), Positives = 27/68 (39%)
 Frame = -1

Query: 299 SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNC 120
           SP R G  D  G     P   G + P +  G     R    GG+G    S    S G + 
Sbjct: 198 SPVRPGC-DCEGNRPAEPPAPGGTSPSSDPGIEADLRSRSSGGRGGRRSSQELSSPGSDS 256

Query: 119 ESDGGARI 96
           E  GGAR+
Sbjct: 257 EDAGGARL 264

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>ARGJ_CAUCR (Q9A3Y4) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 403

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -2

Query: 103 PGSMVKSARPRGESPAVRTAVKDKNRKWDRIV 8
           P S  K AR   ESP V+TA   ++  W RIV
Sbjct: 291 PASARKIARTIAESPLVKTAFAGEDANWGRIV 322

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>PG10_MYCTU (O53810) Hypothetical PE-PGRS family protein PE_PGRS10 precursor|
          Length = 801

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = -1

Query: 269 SGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGGA 102
           SGG+    + VGDS  G  GG+  +    G GG G         S GG     GGA
Sbjct: 287 SGGAGGISKSVGDSAAGGAGGAPGLIGNGGNGGNG-------GASTGGGDGGPGGA 335

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = +3

Query: 213 PRSGQGIPHLSRRAVASATGIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSP 380
           PRS   IPH  RR++ S     P+ S   SP  +  R        +R+   PSPSP
Sbjct: 145 PRSSTPIPHPPRRSLPSPPSPSPSPSPSPSPSPSP-RSTPIPHPRKRSPASPSPSP 199

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>CSTF2_MOUSE (Q8BIQ5) Cleavage stimulation factor, 64 kDa subunit (CSTF 64 kDa|
           subunit) (CF-1 64 kDa subunit) (CstF-64)
          Length = 580

 Score = 30.0 bits (66), Expect = 3.0
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 257 NRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA 144
           N  P  +  S+PG  G   PV+  + VGG GP  L+PA
Sbjct: 240 NGAPPMMQASMPG--GVPAPVQMAAAVGGPGPGSLAPA 275

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>PG46_MYCTU (P0A690) Hypothetical PE-PGRS family protein PE_PGRS46|
          Length = 778

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 236 GDSLPGTGGGSNPVE-RESGVGGKGPNPLSPAA*SCGGNCESDGGA 102
           GD  PG  GG+ P+     GVGG G    +      GG    DGGA
Sbjct: 288 GDGAPGGDGGAGPLLIGNGGVGGLGGAGAAGGNGGAGGMLLGDGGA 333

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>PG46_MYCBO (P0A691) Hypothetical PE-PGRS family protein PE_PGRS46|
          Length = 778

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = -1

Query: 236 GDSLPGTGGGSNPVE-RESGVGGKGPNPLSPAA*SCGGNCESDGGA 102
           GD  PG  GG+ P+     GVGG G    +      GG    DGGA
Sbjct: 288 GDGAPGGDGGAGPLLIGNGGVGGLGGAGAAGGNGGAGGMLLGDGGA 333

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>GAG_FSVMD (P03340) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 536

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +1

Query: 205 DPPPVPGRESPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTKAAVGAHSCP 366
           +PPP PG   P   G+R   P AS    R+ + R  P  ES+      G ++ P
Sbjct: 233 EPPPYPGGHGPPPSGLR--TPAASPIASRLRERRENPAEESQALPLREGPNNRP 284

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>K0157_HUMAN (Q15018) Protein KIAA0157|
          Length = 415

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -1

Query: 281 RPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGK 168
           RP A G SN      G   PG+G    P +R +G  G+
Sbjct: 333 RPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGE 370

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>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
           (Ca(2+)-inhibitable adenylyl cyclase)
          Length = 1265

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
 Frame = -1

Query: 290 RRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVG---GKGPNPLSPAA*SCGGNC 120
           RR R  A GGS+R P   G   P   GG+    R   +G    +G     P   +  G  
Sbjct: 134 RRRRGAAGGGSSRAPPAGGGGGPAAAGGAEVRPRSVELGLDERRGRGRAEPEPEAEAGAP 193

Query: 119 ESDGGARIDGE 87
             D GAR DG+
Sbjct: 194 GGDRGAR-DGD 203

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>GSK3A_RAT (P18265) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3|
           alpha) (Factor A) (FA)
          Length = 483

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 22/60 (36%), Positives = 23/60 (38%)
 Frame = -1

Query: 284 GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
           G P  SG + RT         G GGG  P    SG GG G    S  A   G    S GG
Sbjct: 9   GGPGGSGRA-RTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGG 67

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>GSK3A_HUMAN (P49840) Glycogen synthase kinase-3 alpha (EC 2.7.11.26) (GSK-3|
           alpha)
          Length = 483

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 22/60 (36%), Positives = 23/60 (38%)
 Frame = -1

Query: 284 GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
           G P  SG + RT         G GGG  P    SG GG G    S  A   G    S GG
Sbjct: 9   GGPGGSGRA-RTSSFAEPGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGG 67

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 204 RSAPRSGQGIPHL-SRRAVASATGIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSP 380
           RSAP +G+  P L S RAV++     PA  G  +P    +          RT  PP P+P
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL------GNASRTSTPPVPTP 420

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>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/73 (26%), Positives = 34/73 (46%)
 Frame = +3

Query: 207 SAPRSGQGIPHLSRRAVASATGIRPAASGGRSPERAEIREQDNKSRCRRTFVPPSPSPFR 386
           SA      I   S  A  S++    A++    P  A +++  ++++ RR+    SPSP R
Sbjct: 185 SAKAGCSTITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRR 244

Query: 387 RHDELQWFRGGGA 425
              E +  + GG+
Sbjct: 245 SSREKEQSKTGGS 257

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>RBM12_MACMU (Q8SQ27) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = -1

Query: 281 RPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGG 126
           RP      N     +G  +PG GGG N +   SG GG GP        S GG
Sbjct: 751 RPGMPSVGNSGLPGLGLDVPGFGGGPNNLSGPSGFGG-GPQNFGNGPGSLGG 801

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>RBM12_HUMAN (Q9NTZ6) RNA-binding protein 12 (RNA-binding motif protein 12)|
           (SH3/WW domain anchor protein in the nucleus) (SWAN)
          Length = 932

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 19/52 (36%), Positives = 22/52 (42%)
 Frame = -1

Query: 281 RPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGG 126
           RP      N     +G  +PG GGG N +   SG GG GP        S GG
Sbjct: 751 RPGMPSVGNSGLPGLGLDVPGFGGGPNNLSGPSGFGG-GPQNFGNGPGSLGG 801

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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
            domain-containing protein 1B) (Osa homolog 2) (hOsa2)
            (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated
            factor 250b) (BAF250B)
          Length = 2236

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 430  RRAPPPRNHWSSSWRRKGDGDGGTNVRLQRLLLSCSLISARSGDLPPDA 284
            RR PPP +       ++G GD         +     ++SAR G LP DA
Sbjct: 1831 RRPPPPLSSAGRKKEQEGKGDSEEQQEKSIIATIDDVLSARPGALPEDA 1879

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>TWST1_HYLCO (Q8MIE7) Twist-related protein 1|
          Length = 204

 Score = 29.3 bits (64), Expect = 5.1
 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA-------A* 138
           P R+  P    G     RK   S    GGG+ P     G  G G  P SPA       + 
Sbjct: 24  PDRQQPPSGKRGG----RKRRSSRRSAGGGAGPGGAAGGGVGGGDEPGSPAQGKRGKKSA 79

Query: 137 SCGGNCESDGG 105
            CGG   + GG
Sbjct: 80  GCGGGGSAGGG 90

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>EGR1_RAT (P08154) Early growth response protein 1 (EGR-1) (Krox-24 protein)|
           (Transcription factor Zif268) (Nerve growth
           factor-induced protein A) (NGFI-A)
          Length = 508

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 284 GRPDASGGSNRTPRKVGDSLPGTGGGSN 201
           G P+ SGG+N +      S  G GGGSN
Sbjct: 25  GTPEGSGGNNSSSSSSSSSGGGGGGGSN 52

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>ABP1_RIPCL (Q27905) Probable antibacterial peptide polyprotein|
          Length = 678

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSP 147
           P  R R DAS  S  +P  V + LP      +PV++    GG  P P  P
Sbjct: 275 PVYRSRRDASLESELSPLSVAEDLPEVRERRSPVDK----GGYLPRPTPP 320

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>GUN1_USTMA (P54424) Endoglucanase 1 precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase 1) (Cellulase 1) (EG 1)
          Length = 393

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = -1

Query: 275 DASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNP 156
           + SG    T    G ++    GGSNP   + G GG  P P
Sbjct: 343 NGSGSGAPTSGSDGSAVAPPSGGSNPGAAQGGQGGAQPGP 382

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>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -1

Query: 296  PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPN 159
            P +RG P ASG   R   K      G  G   P  +   VG +GP+
Sbjct: 1357 PGKRGPPGASGSEGRQGEK---GAKGEAGAEGPPGKTGPVGPQGPS 1399

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>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 694

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 305 R*SPTRRGRPDASGGSNRTPRKV--GDSLPGT-GGGSNPVERESGVGGKGPNPLSPAA*S 135
           R +P   G P +  G+   P++   G S  G  G G+   E   G GG+G  P +PAA  
Sbjct: 472 RETPRPEGGPPSPAGTPPQPKRPRPGASKDGLLGPGAWNGEPSGGSGGEGSRPATPAAAG 531

Query: 134 CG 129
            G
Sbjct: 532 AG 533

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>RL4_NITEU (Q82X87) 50S ribosomal protein L4|
          Length = 206

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = -1

Query: 332 VLLSYLGALR*SP-TRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESG 180
           V+ SYL   R     ++GR D +G + +  R+ G     TG  +NP+ R  G
Sbjct: 35  VVKSYLANARAGTRAQKGRSDVTGSTRKQWRQKGTGRARTGAATNPLWRGGG 86

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>LIPB_DEIRA (Q9RWA5) Lipoyltransferase (EC 2.3.1.-) (Lipoyl-[acyl-carrier|
           protein]-protein-N-lipoyltransferase) (Lipoate-protein
           ligase B)
          Length = 336

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
 Frame = -3

Query: 312 RAPVISHPTRPAGC---QWRKQPHAAKGGG 232
           R P +  PT   G    +WR QPH A GGG
Sbjct: 58  RPPGLPSPTNRVGQSVPKWRPQPHKAAGGG 87

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>SC24A_ARATH (Q9SFU0) Protein transport protein Sec24-like At3g07100|
          Length = 1038

 Score = 28.9 bits (63), Expect = 6.7
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 188 PFPPDSIRP--PFRAGNPPPFAACGCFRHWHPAGRVGWEITGAR 313
           PF P + +P  PF A  PPP    G  R   P+  V  +I G+R
Sbjct: 46  PFTPSASQPTRPFTASGPPPAPPVGTMRPGQPSPFVS-QIPGSR 88

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>VP40_BHV1C (P54817) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein]
          Length = 621

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 15/54 (27%)
 Frame = +3

Query: 264 ATGIRPAASGGRSPERAEIREQDNKS---------------RCRRTFVPPSPSP 380
           A+ + P  +GG  PER   RE+  KS               R R+  +PP+P P
Sbjct: 254 ASAVFPLPTGGEGPERTGGRERAQKSAVAGGVCIALPVAGGRARQPELPPAPPP 307

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>USP_DROME (P20153) Protein ultraspiracle (XR2C) (Chorion factor 1)|
          Length = 508

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 16/37 (43%), Positives = 17/37 (45%)
 Frame = -1

Query: 284 GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVG 174
           GR  ASGG +  P  VG S    GGG   V    G G
Sbjct: 187 GRLSASGGGSSGPGSVGGSSSQGGGGGGGVSGGMGSG 223

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>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
 Frame = -1

Query: 260 SNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCG----------GNCESD 111
           S +TPR V    PG   G+NP    +   G  P P  PA+   G          G     
Sbjct: 144 SGKTPRPVPK--PGPRPGNNPFSSTASGMGTRPTPRPPASGGTGAPRPGPRPHPGMMPPR 201

Query: 110 GGARIDGEKRPTARR 66
            GA   G  RP A R
Sbjct: 202 PGASAGGPPRPQAPR 216

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>GAG_FSVGA (P03337) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30]
          Length = 425

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 205 DPPPVPGRESPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTKAAVGAHSCP 366
           +PPP PG   P   G R   P AS    R+ + R  P  ES+      G ++ P
Sbjct: 233 EPPPYPGGHGPPPSGPR--TPTASPIASRLRERRENPAEESQALPLREGPNNRP 284

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>NIFU_RHOSH (Q01180) Nitrogen fixation protein nifU|
          Length = 246

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +1

Query: 205 DPPPVPGRESPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESR 330
           +P PVP   +P    VRLL P    +PR V D   AP  E+R
Sbjct: 128 EPAPVP---APAAAPVRLLAPKHDSQPRIVRDVPLAPAEEAR 166

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>GAG_FSVHZ (P04322) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30] (Fragment)
          Length = 414

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 205 DPPPVPGRESPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTKAAVGAHSCP 366
           +PPP PG   P   G R   P AS    R+ + R  P  ES+      G ++ P
Sbjct: 230 EPPPYPGGHGPLPSGPR--TPTASPIASRLRERRENPAEESQALPLREGPNNRP 281

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>ZIC2_XENLA (Q91689) Zinc finger protein ZIC 2 (Zinc finger protein of the|
           cerebellum 2) (Zinc finger DNA-binding protein fZic)
          Length = 501

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -1

Query: 236 GDSLPGTGGGSNPVERESGVGGKGPNPLSP 147
           G S  G+GGG        G G  GP+ LSP
Sbjct: 68  GGSGGGSGGGGGGAGPNGGAGASGPHDLSP 97

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>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/65 (32%), Positives = 26/65 (40%)
 Frame = -1

Query: 284  GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
            G  + +GG+  T    GD   GT G    V  E G GG+G +         GGN     G
Sbjct: 1656 GGINGAGGTGGTGGAGGDGQNGTTG----VASEGGAGGQGGDGGQGGIGGAGGNAGFGAG 1711

Query: 104  ARIDG 90
               DG
Sbjct: 1712 VPGDG 1716



 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/65 (32%), Positives = 26/65 (40%)
 Frame = -1

Query: 284  GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
            G  + +GG+  T    GD   GT G    V  E G GG+G +         GGN     G
Sbjct: 1451 GGINGAGGTGGTGGAGGDGQNGTTG----VASEGGAGGQGGDGGQGGIGGAGGNAGFGAG 1506

Query: 104  ARIDG 90
               DG
Sbjct: 1507 VPGDG 1511

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>EVX1_MOUSE (P23683) Homeobox even-skipped homolog protein 1 (EVX-1)|
          Length = 416

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 20/57 (35%), Positives = 23/57 (40%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGG 126
           PT R R    GG    P    D L G+  G     R +G    GP P  P+A S  G
Sbjct: 55  PTSRER--GGGGQEEEPV---DGLAGSAAGLGAEPRSAGAAMLGPGPPVPSADSLSG 106

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>LORI_MOUSE (P18165) Loricrin|
          Length = 486

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/44 (40%), Positives = 20/44 (45%)
 Frame = -1

Query: 236 GDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
           G S  G GGGS    + SG GG G +       SCGG     GG
Sbjct: 135 GGSSCGGGGGSGGGVKYSGGGGGGGS-------SCGGGSSGGGG 171

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>FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)|
          Length = 694

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
 Frame = -1

Query: 299 SPTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*S--CGG 126
           S T  G   +SGGS       G S  G+G G    +  SG GG G    S +  +  C G
Sbjct: 182 SYTEAGSGGSSGGS-------GGSGSGSGSGGKRKQGGSGSGGSGAGGSSGSTSTKPCRG 234

Query: 125 ----NCESDGGARIDGEK 84
               NC++  G +  G++
Sbjct: 235 RNSKNCQNPQGEKASGKE 252

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>EOMES_HUMAN (O95936) Eomesodermin homolog|
          Length = 686

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/51 (35%), Positives = 21/51 (41%)
 Frame = -1

Query: 278 PDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGG 126
           P A  GS          + G GGG    +   G    GP P + AA SCGG
Sbjct: 210 PGAGAGSG------AGGINGGGGGPGTYQYSQGAPLYGPYPGAAAAGSCGG 254

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>SEC65_SCHPO (O94407) Signal recognition particle sec65 subunit|
          Length = 199

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 224 PGTGGGSNPVERESGVGGKGPNPLSPAA 141
           PG  GG NP+   +G+GG  P   +P A
Sbjct: 153 PGLAGGMNPMAALAGMGGPAPPMPTPQA 180

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>GAG_FLV (P10262) Gag polyprotein [Contains: Core protein p15; Core protein|
           p12; Core protein p30; Core protein p10]
          Length = 580

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +1

Query: 205 DPPPVPGRESPTFRGVRLLPPLASGRPRRVGDHRSAPR*ESRTTKAAVGAHSCP 366
           +PPP PG   P   G R   P AS    R+ + R  P  ES+      G ++ P
Sbjct: 230 EPPPYPGGHGPPPSGPR--TPAASPIASRLRERRENPAEESQALPLREGPNNRP 281

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>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)|
           (EBNA-1)
          Length = 641

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 21/61 (34%), Positives = 25/61 (40%)
 Frame = -1

Query: 284 GRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPAA*SCGGNCESDGG 105
           GRP A GGS   PR          G   P +R S +G KG +  + A    GG      G
Sbjct: 52  GRPGAPGGSGSGPRH-------RDGVRRPQKRPSCIGCKGTHGGTGAGAGAGGAGAGGAG 104

Query: 104 A 102
           A
Sbjct: 105 A 105

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>TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)|
          Length = 202

 Score = 28.5 bits (62), Expect = 8.7
 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 7/71 (9%)
 Frame = -1

Query: 296 PTRRGRPDASGGSNRTPRKVGDSLPGTGGGSNPVERESGVGGKGPNPLSPA-------A* 138
           P R+  P    G     RK   S    GGG+ P     G  G G  P SPA       + 
Sbjct: 24  PDRQQPPSGKRGG----RKRRSSRRSAGGGAGPGGAAGGGVGGGDEPGSPAQGKRGKKSA 79

Query: 137 SCGGNCESDGG 105
            CGG   + GG
Sbjct: 80  GCGGGGGAGGG 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,390,787
Number of Sequences: 219361
Number of extensions: 1613242
Number of successful extensions: 6720
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 5624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6650
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2968155324
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result