>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 107      cgccgtcgctctcgcagttgccgccgc 133
                ||||| |||||||||||||||||||||
Sbjct: 29943619 cgccggcgctctcgcagttgccgccgc 29943645

>gb|AC121868.2| Mus musculus BAC clone RP24-116H17 from 1, complete sequence
          Length = 209039

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 22    attttctatttttatccttcacc 44
             |||||||||||||||||||||||
Sbjct: 26493 attttctatttttatccttcacc 26471

>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 107   cgccgtcgctctcgcagttgccgccgc 133
             ||||| |||||||||||||||||||||
Sbjct: 66987 cgccggcgctctcgcagttgccgccgc 66961

>emb|AL731581.2|OSJN00228 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0022F16,
             complete sequence
          Length = 154397

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 103   gcgccgccgtcgctctcgcagttgccgccgc 133
             |||||||||||||| |||| |||||||||||
Sbjct: 79145 gcgccgccgtcgctatcgccgttgccgccgc 79115

>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
              sequence
          Length = 139946

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 107    cgccgtcgctctcgcagttgccgccgc 133
              ||||| |||||||||||||||||||||
Sbjct: 109560 cgccggcgctctcgcagttgccgccgc 109586

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 103     gcgccgccgtcgctctcgcagttgccgccgc 133
               |||||||||||||| |||| |||||||||||
Sbjct: 3969830 gcgccgccgtcgctatcgccgttgccgccgc 3969800

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 107      cgccgtcgctctcgcagttgccgccgc 133
                ||||| |||||||||||||||||||||
Sbjct: 30035041 cgccggcgctctcgcagttgccgccgc 30035067

>dbj|AK105468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-126-A06, full
           insert sequence
          Length = 1627

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 38  cgccggcgctctcgcagttgccgccgc 64

>dbj|AK101854.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069N12, full
           insert sequence
          Length = 1931

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 37  cgccggcgctctcgcagttgccgccgc 63

>gb|AC142408.3| Mus musculus BAC clone RP24-342F15 from 1, complete sequence
          Length = 162423

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 22    attttctatttttatccttcacc 44
             |||||||||||||||||||||||
Sbjct: 91840 attttctatttttatccttcacc 91862

>dbj|AB038234.1| Oryza sativa cycH-1 mRNA for cyclin H-1, complete cds
          Length = 1593

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 107 cgccgtcgctctcgcagttgccgccgc 133
           ||||| |||||||||||||||||||||
Sbjct: 20  cgccggcgctctcgcagttgccgccgc 46

>ref|XM_464296.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 282

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 104 cgccgccgtcgctctcgcagttgcc 128
           ||||||||||| |||||||||||||
Sbjct: 136 cgccgccgtcgatctcgcagttgcc 112

>ref|XM_583700.2| PREDICTED: Bos taurus similar to Absent in melanoma 1 protein
            (LOC507142), mRNA
          Length = 5940

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 401  ccagtggttccgaggtggggg 421
            |||||||||||||||||||||
Sbjct: 3730 ccagtggttccgaggtggggg 3710

>emb|AL021921.1|HS357I16 Human DNA sequence from clone RP3-357I16 on chromosome 1p36.13,
             complete sequence
          Length = 134506

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 220   ccgggcagggaatcccccacctttc 244
             ||||| |||||||||||||||||||
Sbjct: 23567 ccgggtagggaatcccccacctttc 23543

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 104     cgccgccgtcgctctcgcagttgcc 128
               ||||||||||| |||||||||||||
Sbjct: 3909692 cgccgccgtcgatctcgcagttgcc 3909668

>gb|AC012671.7| Homo sapiens BAC clone RP11-554H10 from 2, complete sequence
          Length = 198694

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    tttctatttttatccttcacc 44
             |||||||||||||||||||||
Sbjct: 38259 tttctatttttatccttcacc 38279

>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence
          Length = 142118

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 24     tttctatttttatccttcacc 44
              |||||||||||||||||||||
Sbjct: 100724 tttctatttttatccttcacc 100744

>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1116_A06
          Length = 176062

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    cgccgccgtcgctctcgcagttgcc 128
              ||||||||||| |||||||||||||
Sbjct: 166024 cgccgccgtcgatctcgcagttgcc 166000

>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0030G02
          Length = 187265

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 104    cgccgccgtcgctctcgcagttgcc 128
              ||||||||||| |||||||||||||
Sbjct: 108163 cgccgccgtcgatctcgcagttgcc 108139

>gb|U95738.1|HSU95738 Human chromosome 16p13.11 BAC clone CIT987SK-29B12 complete sequence
          Length = 171368

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 220    ccgggcagggaatcccccacctttc 244
              ||||| |||||||||||||||||||
Sbjct: 122363 ccgggtagggaatcccccacctttc 122387

>gb|U13051.1|FSU13051 Nectria haematococca pectate lyase B (pelB) gene, complete cds
          Length = 2646

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 98   tccgggcgccgccgtcgctctcgcagttgccgc 130
            |||||| |||||||| || ||||||||||||||
Sbjct: 1889 tccgggggccgccgttgccctcgcagttgccgc 1857

>gb|AC123678.19| Mus musculus chromosome 3, clone RP23-276A22, complete sequence
          Length = 198615

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     attttctatttttatccttcaccg 45
              |||||||||||||| |||||||||
Sbjct: 190056 attttctatttttagccttcaccg 190079

>emb|AL450333.13| Human DNA sequence from clone RP11-25O6 on chromosome 6, complete
             sequence
          Length = 156964

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    attttctatttttatccttc 41
             ||||||||||||||||||||
Sbjct: 47389 attttctatttttatccttc 47408

>gb|AC022027.7| Homo sapiens chromosome 10 clone RP11-59J5, complete sequence
          Length = 103493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   gaggtgggggagcgcgcctc 431
             ||||||||||||||||||||
Sbjct: 14936 gaggtgggggagcgcgcctc 14917

>gb|AC096886.2| Homo sapiens chromosome 3 clone RP11-3F4, complete sequence
          Length = 163114

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    atcccattttctatttttat 36
             ||||||||||||||||||||
Sbjct: 85061 atcccattttctatttttat 85080

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      gattcgatccgccccccgtt 219
                ||||||||||||||||||||
Sbjct: 24333613 gattcgatccgccccccgtt 24333594

>gb|AC009460.4|AC009460 Drosophila melanogaster, chromosome 2R, region 60B-60C, BAC clone
              BACR04P18, complete sequence
          Length = 159455

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ccatctccatctccttttcg 385
              ||||||||||||||||||||
Sbjct: 100130 ccatctccatctccttttcg 100149

>gb|AC107863.9| Mus musculus chromosome 3, clone RP23-383E14, complete sequence
          Length = 194268

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 22     attttctatttttatccttcaccg 45
              |||||||||||||| |||||||||
Sbjct: 114320 attttctatttttagccttcaccg 114343

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 407     gttccgaggtgggggagcgcgcctcaca 434
               ||||||| || |||||||||||||||||
Sbjct: 5336034 gttccgaagtaggggagcgcgcctcaca 5336061

>dbj|AP004615.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0414C05
          Length = 123105

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gattcgatccgccccccgtt 219
             ||||||||||||||||||||
Sbjct: 58243 gattcgatccgccccccgtt 58224

>gb|AE003463.2| Drosophila melanogaster chromosome 2R, section 70 of 73 of the complete
              sequence
          Length = 298827

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    ccatctccatctccttttcg 385
              ||||||||||||||||||||
Sbjct: 199531 ccatctccatctccttttcg 199550

>gb|AE017143.1| Haemophilus ducreyi strain 35000HP complete genome
          Length = 1698955

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 18     tcccattttctatttttatc 37
              ||||||||||||||||||||
Sbjct: 226437 tcccattttctatttttatc 226418


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,357,079
Number of Sequences: 3902068
Number of extensions: 3357079
Number of successful extensions: 73764
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73501
Number of HSP's gapped (non-prelim): 263
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)