ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl04d11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC156634.2| Mus musculus BAC clone RP24-462L6 from chromosome 9, complete sequence Length = 112412 Score = 42.1 bits (21), Expect = 0.047 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacacc 21 ||||||||||||||||||||| Sbjct: 503 ctctcttctctctcacacacc 523
>emb|CT025575.12| Mouse DNA sequence from clone RP23-272A7 on chromosome 9, complete sequence Length = 232192 Score = 42.1 bits (21), Expect = 0.047 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacacc 21 ||||||||||||||||||||| Sbjct: 200758 ctctcttctctctcacacacc 200778
>gb|AC090871.11| Oryza sativa chromosome 3 BAC OSJNBb0060J21 genomic sequence, complete sequence Length = 162497 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 127073 ctctcttctctctcacacac 127054
>gb|AC163737.3| Pan troglodytes BAC clone CH251-547O12 from chromosome 6, complete sequence Length = 207116 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 71962 ctctcttctctctcacacac 71981
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 32616834 ctctcttctctctcacacac 32616853
>gb|AC122452.4| Mus musculus BAC clone RP24-255M5 from chromosome 16, complete sequence Length = 181463 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 115013 ctctcttctctctcacacac 114994
>gb|AC110166.17| Mus musculus chromosome 16, clone RP23-80O10, complete sequence Length = 131042 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 48123 ctctcttctctctcacacac 48104
>gb|AC163625.5| Mus musculus BAC clone RP23-135K11 from chromosome 8, complete sequence Length = 228750 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 96659 ctctcttctctctcacacac 96678
>emb|AL731532.8| Human DNA sequence from clone RP11-113E21 on chromosome 10 Contains the 3'end of a novel gene, complete sequence Length = 100443 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 47003 ctctcttctctctcacacac 47022
>emb|AL160053.15| Human DNA sequence from clone RP11-536D16 on chromosome 9 Contains the 3' end of the variant for the C9orf93 gene for chromosome 9 open reading frame 93, complete sequence Length = 172845 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 86605 ctctcttctctctcacacac 86624
>emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 on chromosome Xp11.21-11.23 Contains the 3' end of the PFKFB1 gene for 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, and the TRO gene for trophinin, complete sequence Length = 103115 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 94697 ctctcttctctctcacacac 94678
>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2 Contains the 3' end of the TFEB gene for transcription factor EB (TCFEB), a nucleophosmin (nucleolar phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI gene for MyoD family inhibitor, the 5' end of a novel gene and two CpG islands, complete sequence Length = 110665 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 30599 ctctcttctctctcacacac 30580
>gb|AF252456.1| Bos taurus clone MNB-42 microsatellite sequence Length = 550 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 427 ctctcttctctctcacacac 408
>emb|CR376827.6| Zebrafish DNA sequence from clone CH211-154C21 in linkage group 14, complete sequence Length = 110290 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 35442 ctctcttctctctcacacac 35461
>emb|AL606598.3|OSJN00036 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G16, complete sequence Length = 114051 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 46216 ctctcttctctctcacacac 46235
>emb|BX005025.16| Zebrafish DNA sequence from clone DKEY-67K20 in linkage group 8, complete sequence Length = 196375 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 151308 ctctcttctctctcacacac 151327
>emb|CR591436.1| full-length cDNA clone CS0DM009YE14 of Fetal liver of Homo sapiens (human) Length = 1918 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 1772 ctctcttctctctcacacac 1791
>dbj|AK148740.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120441J03 product:unclassifiable, full insert sequence Length = 4155 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 2173 ctctcttctctctcacacac 2192
>emb|BX005020.7| Zebrafish DNA sequence from clone DKEY-237D7 in linkage group 8, complete sequence Length = 202747 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 51364 ctctcttctctctcacacac 51345
>gb|AC010428.7| Homo sapiens chromosome 5 clone CTD-2199C13, complete sequence Length = 134420 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 3404 ctctcttctctctcacacac 3423
>gb|AC157085.2| Mus musculus BAC clone RP24-185I21 from chromosome 9, complete sequence Length = 159122 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 54493 ctctcttctctctcacacac 54474
>gb|AF335470.1|AF335470 Mus musculus myosin light chain kinase (Mylk) gene, partial cds Length = 180102 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 179635 ctctcttctctctcacacac 179654
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 45869 ctctcttctctctcacacac 45850
>gb|AC011403.4|AC011403 Homo sapiens chromosome 5 clone CTB-3P13, complete sequence Length = 124552 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 76279 ctctcttctctctcacacac 76260
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 20611882 ctctcttctctctcacacac 20611901 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 10852176 ctctcttctctctcacac 10852193
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 1738008 ctctcttctctctcacacac 1737989 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 1737152 ctctcttctctctcacacac 1737171
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 7377504 ctctcttctctctcacacac 7377523 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 23290890 ctcttctctctcacacac 23290873 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 tctctctcacacacctctcctc 28 |||||||| ||||||||||||| Sbjct: 14068007 tctctctctcacacctctcctc 14067986 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 2783297 cacacctctcctcccccc 2783314
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 32707344 ctctcttctctctcacacac 32707363
>gb|AC154811.2| Mus musculus BAC clone RP24-531D17 from chromosome 14, complete sequence Length = 167122 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 84338 ctctcttctctctcacacac 84357
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 104185 ctctcttctctctcacacac 104204
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 1737985 ctctcttctctctcacacac 1737966 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 1737128 ctctcttctctctcacacac 1737147
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 103332 ctctcttctctctcacacac 103313 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 102475 ctctcttctctctcacacac 102494
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 29769 ctctcttctctctcacacac 29750 Score = 40.1 bits (20), Expect = 0.18 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacac 20 |||||||||||||||||||| Sbjct: 28913 ctctcttctctctcacacac 28932
>gb|AC005142.2| Arabidopsis thaliana BAC T5L23 from chromosome IV, near 19 cM, complete sequence Length = 116448 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacaca 19 ||||||||||||||||||| Sbjct: 31824 ctctcttctctctcacaca 31842
>gb|AC024776.1| Caenorhabditis elegans cosmid Y41D4B, complete sequence Length = 138020 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 66863 tctcttctctctcacacac 66881
>gb|BC058653.1| Mus musculus lemur tyrosine kinase 2, mRNA (cDNA clone IMAGE:6407188), partial cds Length = 4139 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 588 cttctctctcacacacctc 606
>gb|AC116811.15| Mus musculus chromosome 6, clone RP24-356D15, complete sequence Length = 150909 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcacacacctctcctcccc 31 ||||||||||||||||||| Sbjct: 66117 tcacacacctctcctcccc 66099
>gb|AC125010.6| Mus musculus chromosome 10, clone RP24-117L12, complete sequence Length = 223541 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctccc 30 ||||||||||||||||||| Sbjct: 79037 ctcacacacctctcctccc 79019
>gb|AC132127.3| Mus musculus BAC clone RP23-408B15 from chromosome 16, complete sequence Length = 182676 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 tctcttctctctcacacacctct 24 |||||||||||||||||| |||| Sbjct: 4029 tctcttctctctcacacatctct 4007
>ref|XM_983031.1| PREDICTED: Mus musculus lemur tyrosine kinase 2 (Lmtk2), mRNA Length = 8114 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 4582 cttctctctcacacacctc 4600
>ref|XM_132499.8| PREDICTED: Mus musculus lemur tyrosine kinase 2 (Lmtk2), mRNA Length = 8114 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 4582 cttctctctcacacacctc 4600
>ref|XM_001001626.1| PREDICTED: Mus musculus lemur tyrosine kinase 2 (Lmtk2), mRNA Length = 4617 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 4254 cttctctctcacacacctc 4272
>gb|AC133646.4| Mus musculus BAC clone RP23-254F11 from chromosome 18, complete sequence Length = 209764 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacacc 21 ||||||||||||||||||| Sbjct: 130087 ctcttctctctcacacacc 130105
>gb|AC140549.12| Medicago truncatula clone mth2-28o14, complete sequence Length = 139778 Score = 38.2 bits (19), Expect = 0.73 Identities = 25/27 (92%) Strand = Plus / Plus Query: 7 tctctctcacacacctctcctcccccc 33 ||||||||||||| ||||| ||||||| Sbjct: 42657 tctctctcacacatctctcatcccccc 42683
>gb|AY496246.1| Macrosiphum euphorbiae clone Me11 microsatellite sequence Length = 638 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 tctctctcacacacctctc 25 ||||||||||||||||||| Sbjct: 427 tctctctcacacacctctc 445
>emb|AL356311.6| Human DNA sequence from clone RP3-443C4 on chromosome 6 Contains the part of the ESR1 gene for estrogen receptor 1, a novel gene and a CpG island, complete sequence Length = 67346 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacaca 19 ||||||||||||||||||| Sbjct: 32259 ctctcttctctctcacaca 32241
>emb|BX070604.1|CNS09QN4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7DB01 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 786 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 131 tctcttctctctcacacac 149
>emb|BX061921.1|CNS09JXX Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC42DG11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 926 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 95 tctcttctctctcacacac 113
>emb|BX060752.1|CNS09J1G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC41BA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 612 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 146 tctcttctctctcacacac 164
>emb|BX059871.1|CNS09ICZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC40AA06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 428 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 94 tctcttctctctcacacac 112
>emb|BX042143.1|CNS094OJ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC14AB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 930 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 119 tctcttctctctcacacac 137
>emb|BX041862.1|CNS094GQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC13CB10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 312 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 110 tctcttctctctcacacac 128
>emb|BX040197.1|CNS0936H Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10DE06 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 953 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 104 tctcttctctctcacacac 122
>emb|BX039924.1|CNS092YW Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 103 tctcttctctctcacacac 121
>emb|BX039923.1|CNS092YV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10BH02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1019 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 1003 tctcttctctctcacacac 985
>emb|BX016553.1|CNS08KXP Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA24DE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 836 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 139 tctcttctctctcacacac 157
>emb|BX008742.1|CNS08EWQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA14BC04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 804 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacacac 20 ||||||||||||||||||| Sbjct: 139 tctcttctctctcacacac 157
>emb|AL161497.2|ATCHRIV9 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 9 Length = 159629 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacaca 19 ||||||||||||||||||| Sbjct: 53102 ctctcttctctctcacaca 53120
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 173866 cttctctctcacacacctc 173848
>dbj|AK129279.2| Mus musculus mRNA for mKIAA1079 protein Length = 6648 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 3118 cttctctctcacacacctc 3136
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 102549 cttctctctcacacacctc 102531
>gb|AC106787.2| Homo sapiens chromosome 5 clone RP11-365I6, complete sequence Length = 129667 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 5 cttctctctcacacacctctcct 27 |||||||||||| |||||||||| Sbjct: 96260 cttctctctcacccacctctcct 96282
>dbj|AK039738.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330101P12 product:inferred: hypothetical protein {Macaca fascicularis}, full insert sequence Length = 2664 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 558 cttctctctcacacacctc 576
>gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4, complete sequence Length = 194206 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Plus Query: 7 tctctctcacacacctctcctcc 29 |||||||||||||||| |||||| Sbjct: 144570 tctctctcacacacctttcctcc 144592
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 tcttctctctcacacacct 22 ||||||||||||||||||| Sbjct: 15182430 tcttctctctcacacacct 15182448
>gb|AC129884.4| Ornithorhynchus anatinus clone OA_Bb-5C22, complete sequence Length = 120929 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cacacacctctcctccccc 32 ||||||||||||||||||| Sbjct: 21041 cacacacctctcctccccc 21059
>gb|AC135964.2| Mus musculus BAC clone RP23-306G18 from chromosome 16, complete sequence Length = 179599 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 tctcttctctctcacacacctct 24 |||||||||||||||||| |||| Sbjct: 128888 tctcttctctctcacacatctct 128866
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 tcttctctctcacacacct 22 ||||||||||||||||||| Sbjct: 66205 tcttctctctcacacacct 66223
>gb|AC003998.1|AC003998 Human PAC clone RP1-161J9 from 5q31, complete sequence Length = 138965 Score = 38.2 bits (19), Expect = 0.73 Identities = 22/23 (95%) Strand = Plus / Minus Query: 5 cttctctctcacacacctctcct 27 |||||||||||| |||||||||| Sbjct: 20575 cttctctctcacccacctctcct 20553
>gb|AC152450.4| Mus musculus BAC clone RP24-342M21 from 18, complete sequence Length = 161106 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacacc 21 ||||||||||||||||||| Sbjct: 144593 ctcttctctctcacacacc 144575
>emb|Y14553.1|CFPSI5 Cladosporium fulvum mRNA for pSI-5 protein Length = 326 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 13 tcacacacctctcctcccc 31 ||||||||||||||||||| Sbjct: 235 tcacacacctctcctcccc 217
>emb|AL845466.4| Mouse DNA sequence from clone RP23-433P19 on chromosome 2, complete sequence Length = 197839 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacacc 21 ||||||||||||||||||| Sbjct: 74197 ctcttctctctcacacacc 74215
>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence Length = 217530 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 cttctctctcacacacctc 23 ||||||||||||||||||| Sbjct: 76661 cttctctctcacacacctc 76643
>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194042 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 13 tcacacacctctcctcccc 31 ||||||||||||||||||| Sbjct: 153874 tcacacacctctcctcccc 153892
>emb|AL611985.22| Mouse DNA sequence from clone RP23-421E12 on chromosome 4, complete sequence Length = 219205 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacaca 19 ||||||||||||||||||| Sbjct: 23431 ctctcttctctctcacaca 23449
>emb|AL845170.5| Mouse DNA sequence from clone RP23-282A22 on chromosome 2, complete sequence Length = 183985 Score = 38.2 bits (19), Expect = 0.73 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 cacacacctctcctccccc 32 ||||||||||||||||||| Sbjct: 131027 cacacacctctcctccccc 131045
>gb|AC126606.16| Mus musculus chromosome 1, clone RP24-68C1, complete sequence Length = 192150 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 19165 ctcttctctctcacacac 19148
>ref|NM_105463.2| Arabidopsis thaliana unknown protein AT1G67930 mRNA, complete cds Length = 3246 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 422 ctctcttctctctcacac 439
>gb|AY017941.1| Oryza sativa microsatellite MRG0266 containing (AG)X16, genomic sequence Length = 232 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 tcttctctctcacacacc 21 |||||||||||||||||| Sbjct: 212 tcttctctctcacacacc 195
>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence Length = 215766 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 ctctctcacacacctctc 25 |||||||||||||||||| Sbjct: 128284 ctctctcacacacctctc 128301
>ref|XM_880830.1| PREDICTED: Bos taurus similar to Armadillo repeat protein deleted in velo-cardio-facial syndrome, transcript variant 4 (LOC517045), mRNA Length = 4664 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 4485 ctcacacacctctcctcc 4468
>ref|XM_880811.1| PREDICTED: Bos taurus similar to Armadillo repeat protein deleted in velo-cardio-facial syndrome, transcript variant 3 (LOC517045), mRNA Length = 3169 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 2990 ctcacacacctctcctcc 2973
>ref|XM_867760.1| PREDICTED: Bos taurus similar to Armadillo repeat protein deleted in velo-cardio-facial syndrome, transcript variant 2 (LOC517045), mRNA Length = 4682 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 4503 ctcacacacctctcctcc 4486
>ref|XM_595209.2| PREDICTED: Bos taurus similar to Armadillo repeat protein deleted in velo-cardio-facial syndrome, transcript variant 1 (LOC517045), mRNA Length = 4562 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 4383 ctcacacacctctcctcc 4366
>gb|AC125186.6| Mus musculus BAC clone RP23-302C16 from chromosome 1, complete sequence Length = 192042 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 22167 ctcttctctctcacacac 22184
>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence Length = 215786 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 ctctctcacacacctctc 25 |||||||||||||||||| Sbjct: 87484 ctctctcacacacctctc 87467
>emb|BX324199.7| Zebrafish DNA sequence from clone DKEYP-7D4 in linkage group 17, complete sequence Length = 69782 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 tctctctcacacacctct 24 |||||||||||||||||| Sbjct: 35270 tctctctcacacacctct 35253
>gb|AC140055.4| Mus musculus BAC clone RP23-52F4 from chromosome 7, complete sequence Length = 192288 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 tctctctcacacacctct 24 |||||||||||||||||| Sbjct: 169163 tctctctcacacacctct 169180
>gb|AC116596.3| Mus musculus BAC clone RP24-335P21 from chromosome 15, complete sequence Length = 165103 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 10 ctctcacacacctctcct 27 |||||||||||||||||| Sbjct: 86985 ctctcacacacctctcct 86968
>gb|AC073574.11| Homo sapiens 12 BAC RP11-393J8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181287 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 15 acacacctctcctccccc 32 |||||||||||||||||| Sbjct: 8322 acacacctctcctccccc 8339
>gb|AC125093.4| Mus musculus BAC clone RP24-176F8 from chromosome 19, complete sequence Length = 158027 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 49944 ctctcttctctctcacac 49927
>gb|AC112147.5| Mus musculus BAC clone RP23-175E16 from 9, complete sequence Length = 202928 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 96438 ctcttctctctcacacac 96455
>gb|AC098721.3| Mus musculus BAC clone RP23-2O23 from 2, complete sequence Length = 219368 Score = 36.2 bits (18), Expect = 2.9 Identities = 27/30 (90%) Strand = Plus / Minus Query: 1 ctctcttctctctcacacacctctcctccc 30 |||||||||||||| | | ||||||||||| Sbjct: 111145 ctctcttctctctctcccccctctcctccc 111116
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 37045 ctcttctctctcacacac 37028
>gb|AC142224.5| Medicago truncatula clone mth2-20k24, complete sequence Length = 102976 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 25978 ctctcttctctctcacac 25995
>emb|AL390731.9| Human DNA sequence from clone RP11-506F17 on chromosome 13 Contains a thioredoxin-like 32kDa (TXNL) pseudogene, complete sequence Length = 166000 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 29720 ctcttctctctcacacac 29737
>emb|AL138795.21| Human DNA sequence from clone RP4-790G17 on chromosome 1q21.1-21.3 Contains the ANP32E gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member E, the CA14 gene for carbonic anhydrase XIV, the gene for a likely ortholog of C. elegans anterior pharynx defective 1A (APH-1A), the gene for a novel protein (FLJ23221), a novel gene and the MRPS21 gene for mitochondrial ribosomal protein S21, complete sequence Length = 132823 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 72455 cacacctctcctcccccc 72438
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 102649 ctctcttctctctcacac 102666
>emb|AL663099.7| Mouse DNA sequence from clone DN-384L23 on chromosome 3 Contains a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, two novel genes (4930406D18RIK) (4930431B09Rik), the 5' end of a novel gene (E130019M14RIK) and a CpG island, complete sequence Length = 177135 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 144071 ctcttctctctcacacac 144088
>gb|AC150032.3| Rhinolophus ferrumequinum clone VMRC7-372J13, complete sequence Length = 168878 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 84330 ctcacacacctctcctcc 84313 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 84091 ctcacacacctctcctcc 84074 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83905 ctcacacacctctcctcc 83888 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83826 ctcacacacctctcctcc 83809 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83800 ctcacacacctctcctcc 83783 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83747 ctcacacacctctcctcc 83730 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83694 ctcacacacctctcctcc 83677 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83642 ctcacacacctctcctcc 83625 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83542 ctcacacacctctcctcc 83525 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83489 ctcacacacctctcctcc 83472 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83437 ctcacacacctctcctcc 83420 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83260 ctcacacacctctcctcc 83243 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83235 ctcacacacctctcctcc 83218 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83158 ctcacacacctctcctcc 83141
>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence Length = 116158 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 12008 ctcttctctctcacacac 12025
>emb|BX890589.11| Zebrafish DNA sequence from clone DKEY-14I16 in linkage group 5, complete sequence Length = 204925 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 67197 ctcttctctctcacacac 67180
>gb|AC136505.41| Medicago truncatula clone mth2-24f15, complete sequence Length = 122801 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 5 cttctctctcacacacct 22 |||||||||||||||||| Sbjct: 77331 cttctctctcacacacct 77314
>gb|AC152174.15| Gasterosteus aculeatus clone ch213-202d23, complete sequence Length = 174464 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 tctctctcacacacctctcctc 28 |||||| ||||||||||||||| Sbjct: 132324 tctctcccacacacctctcctc 132345
>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence Length = 161720 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 7 tctctctcacacacctct 24 |||||||||||||||||| Sbjct: 64276 tctctctcacacacctct 64259
>emb|BX936296.17| Mouse DNA sequence from clone RP23-27J1 on chromosome 2, complete sequence Length = 188273 Score = 36.2 bits (18), Expect = 2.9 Identities = 27/30 (90%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacacctctcctccc 30 |||||||||||||| | | ||||||||||| Sbjct: 90722 ctctcttctctctctcccccctctcctccc 90751
>gb|AC012563.7|AC012563 Arabidopsis thaliana chromosome 1 BAC T23K23 genomic sequence, complete sequence Length = 101966 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 67391 ctctcttctctctcacac 67408
>emb|BX571757.8| Zebrafish DNA sequence from clone CH211-273J9 in linkage group 16, complete sequence Length = 167101 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 79853 ctcttctctctcacacac 79836
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 18606478 ctctcttctctctcacac 18606461 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 13124840 cacacctctcctcccccc 13124857
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 31128446 ctcttctctctcacacac 31128429
>emb|BX817153.1|CNS0AARY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH8ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2670 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 425 ctctcttctctctcacac 442
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 84330 ctcacacacctctcctcc 84313 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 84091 ctcacacacctctcctcc 84074 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83905 ctcacacacctctcctcc 83888 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83826 ctcacacacctctcctcc 83809 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83800 ctcacacacctctcctcc 83783 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83747 ctcacacacctctcctcc 83730 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83694 ctcacacacctctcctcc 83677 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83642 ctcacacacctctcctcc 83625 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83542 ctcacacacctctcctcc 83525 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83489 ctcacacacctctcctcc 83472 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83437 ctcacacacctctcctcc 83420 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83260 ctcacacacctctcctcc 83243 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83235 ctcacacacctctcctcc 83218 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 12 ctcacacacctctcctcc 29 |||||||||||||||||| Sbjct: 83158 ctcacacacctctcctcc 83141
>dbj|AP003376.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0014K08 Length = 177263 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 54791 ctcttctctctcacacac 54774
>gb|AC023473.3|AC023473 Homo sapiens chromosome 3 clone RP11-194I5 map 3p, complete sequence Length = 152246 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ttctctctcacacacctc 23 |||||||||||||||||| Sbjct: 56004 ttctctctcacacacctc 56021
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 46148 ctcttctctctcacacac 46131
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 42028 cacacctctcctcccccc 42045
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 ctctcttctctctcacac 18 |||||||||||||||||| Sbjct: 58581 ctctcttctctctcacac 58564
>dbj|AK175328.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL21-77-C24 Length = 2047 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 2 tctcttctctctcacaca 19 |||||||||||||||||| Sbjct: 14 tctcttctctctcacaca 31
>dbj|AP006163.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1364A02 Length = 137933 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 86858 cacacctctcctcccccc 86875
>dbj|AP003830.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1423_A11 Length = 98377 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Minus Query: 7 tctctctcacacacctctcctc 28 |||||||| ||||||||||||| Sbjct: 43966 tctctctctcacacctctcctc 43945
>emb|AL805945.5| Zebrafish DNA sequence from clone CH211-195M7, complete sequence Length = 212604 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 7 tctctctcacacacctct 24 |||||||||||||||||| Sbjct: 201175 tctctctcacacacctct 201192
>dbj|AP000731.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone:F16J14 Length = 47827 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 2 tctcttctctctcacaca 19 |||||||||||||||||| Sbjct: 5018 tctcttctctctcacaca 5001
>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence Length = 236382 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 1 ctctcttctctctcacacacct 22 ||||||||||||||| |||||| Sbjct: 109697 ctctcttctctctcatacacct 109718
>dbj|AP003704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1048_C10 Length = 99194 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 90308 cacacctctcctcccccc 90325
>gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, complete sequence Length = 196638 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 161551 ctcttctctctcacacac 161534
>gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromosome ul, complete sequence Length = 237797 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 16 cacacctctcctcccccc 33 |||||||||||||||||| Sbjct: 2563 cacacctctcctcccccc 2546
>gb|AC151602.4| Mus musculus BAC clone RP23-218K15 from chromosome 7, complete sequence Length = 249504 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 163155 ctcttctctctcacacac 163172
>gb|AC104328.10| Mus musculus strain C57BL/6J chromosome 18 clone rp23-352p20, complete sequence Length = 183187 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 173203 ctcttctctctcacacac 173220
>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence Length = 198130 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 tctctcacacacctctcc 26 |||||||||||||||||| Sbjct: 153107 tctctcacacacctctcc 153124
>gb|AF019179.1|AF019179 Salmo salar microsatellite Ssa57 DNA Length = 351 Score = 36.2 bits (18), Expect = 2.9 Identities = 21/22 (95%) Strand = Plus / Plus Query: 4 tcttctctctcacacacctctc 25 ||||||||||||||| |||||| Sbjct: 281 tcttctctctcacacccctctc 302
>gb|AC154507.2| Mus musculus BAC clone RP24-95E21 from chromosome 17, complete sequence Length = 189330 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 14 cacacacctctcctcccc 31 |||||||||||||||||| Sbjct: 77210 cacacacctctcctcccc 77227
>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence Length = 145603 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 106108 ctcttctctctcacacac 106125
>emb|AL808120.9| Mouse DNA sequence from clone RP23-418E2 on chromosome X, complete sequence Length = 148328 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Minus Query: 14 cacacacctctcctcccc 31 |||||||||||||||||| Sbjct: 139005 cacacacctctcctcccc 138988
>emb|AL807380.6| Mouse DNA sequence from clone RP23-192G18 on chromosome 2, complete sequence Length = 208614 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 200627 ctcttctctctcacacac 200644
>gb|AC077690.2| Homo sapiens chromosome 3 clone RP11-329A2 map 3p, complete sequence Length = 199979 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ttctctctcacacacctc 23 |||||||||||||||||| Sbjct: 142793 ttctctctcacacacctc 142810
>gb|AC068313.5| Homo sapiens chromosome 3 clone RP11-157E16 map 3p, complete sequence Length = 183807 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 6 ttctctctcacacacctc 23 |||||||||||||||||| Sbjct: 16710 ttctctctcacacacctc 16727
>emb|AL731834.2| Sminthopsis DNA sequence from clone XX-202F9, complete sequence Length = 60585 Score = 36.2 bits (18), Expect = 2.9 Identities = 18/18 (100%) Strand = Plus / Plus Query: 3 ctcttctctctcacacac 20 |||||||||||||||||| Sbjct: 4521 ctcttctctctcacacac 4538 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 643,694 Number of Sequences: 3902068 Number of extensions: 643694 Number of successful extensions: 241619 Number of sequences better than 10.0: 137 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 239254 Number of HSP's gapped (non-prelim): 2361 length of query: 33 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 13 effective length of database: 17,155,003,908 effective search space: 223015050804 effective search space used: 223015050804 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
