ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK106730.1| Oryza sativa (japonica cultivar-group) cDNA clon... 186 4e-44
2gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 105 1e-19
5gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, comple... 44 0.38
6ref|XM_630566.1| Dictyostelium discoideum hypothetical protein (... 42 1.5
7gb|AF034925.4| Leishmania major MEKK-related kinase (MRK1) gene,... 42 1.5
8gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, comple... 42 1.5
9gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 42 1.5
10gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, comple... 42 1.5
11gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, compl... 42 1.5
12gb|AC107882.3| Homo sapiens chromosome 11, clone CTD-2019O4, com... 42 1.5
13gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, co... 42 1.5
14gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, compl... 42 1.5
15gb|AC154327.2| Mus musculus BAC clone RP23-289N10 from 14, compl... 42 1.5
16gb|AC140462.3| Mus musculus BAC clone RP23-13K8 from 14, complet... 42 1.5
17emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 ... 42 1.5
18gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosom... 40 6.0
19gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genom... 40 6.0
20gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, com... 40 6.0
21gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.0
22gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome... 40 6.0
23gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosom... 40 6.0
24gb|DQ334060.1| Drosophila miranda CG10732 gene, partial cds 40 6.0
25emb|AJ544897.1|TNI544897 Tetraodon nigroviridis tf2 gene for tis... 40 6.0
26gb|BC035098.1| Homo sapiens cDNA clone IMAGE:5261953 40 6.0
27gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence 40 6.0
28gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complet... 40 6.0
29emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 i... 40 6.0
30dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
31dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
32dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
33dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
34emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigrov... 40 6.0
35dbj|AK110845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
36dbj|AK109266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.0
37gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, comple... 40 6.0
38gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 6.0
39gb|AF037030.1|AF037030 Zea mays 6-phosphogluconate dehydrogenase... 40 6.0
40emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomi... 40 6.0
41emb|AL645987.7| Mouse DNA sequence from clone RP23-27B20 on chro... 40 6.0 
>dbj|AK106730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-H09, full
           insert sequence
          Length = 1999

 Score =  186 bits (94), Expect = 4e-44
 Identities = 259/314 (82%)
 Strand = Plus / Plus

                                                                       
Query: 127 ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccggcgcggcggag 186
           |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 288 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 347

                                                                       
Query: 187 gcccacgccaaggagggtgacattttcttcctcatcacaaacaggtggtggcagagttgg 246
           |||||||||||||| || ||||  ||||||||||||||  ||||||||||||| ||||||
Sbjct: 348 gcccacgccaaggaaggggacaccttcttcctcatcacccacaggtggtggcaaagttgg 407

                                                                       
Query: 247 attgattatgttattcaggattcggctggtgtaccaagtaatggttctcatcatcatgaa 306
           ||||||||||| ||||| |||| ||||  |  | | | ||||||||||||||||||||| 
Sbjct: 408 attgattatgtcattcaagatttggctaattcaacgaataatggttctcatcatcatgag 467

                                                                       
Query: 307 ttcggttcaaatactcctagaaggccaggagctattgacaatacaaatttgttggatgac 366
              ||||| ||   ||  ||||| |||||||| |||||||||||| ||||| | ||||| 
Sbjct: 468 catggttctaacgttctgagaagaccaggagcaattgacaatacagatttgatagatgat 527

                                                                       
Query: 367 atggcatctgaagtctccgacatgcagattgagctacatgataccttggctgaaggccgt 426
           |  ||||||||||||||  | ||| ||||||| ||||||||||| |||| ||| || |||
Sbjct: 528 actgcatctgaagtctcgaatatggagattgaactacatgatacattggttgagggtcgt 587

                         
Query: 427 gattatatattgct 440
           || |||||| ||||
Sbjct: 588 gactatatactgct 601
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>gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0027P09,
              complete sequence
          Length = 171861

 Score =  105 bits (53), Expect = 1e-19
 Identities = 176/217 (81%)
 Strand = Plus / Plus

                                                                          
Query: 224    caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 283
              |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 144509 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 144568

                                                                          
Query: 284    gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 343
               |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 144569 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 144628

                                                                          
Query: 344    acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 403
              |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 144629 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 144688

                                                   
Query: 404    atgataccttggctgaaggccgtgattatatattgct 440
              ||||||| |||| ||| || ||||| |||||| ||||
Sbjct: 144689 atgatacattggttgagggtcgtgactatatactgct 144725



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                          
Query: 127    ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccggcgcggcggag 186
              |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 143225 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 143284

                                                    
Query: 187    gcccacgccaaggagggtgacattttcttcctcatcac 224
              |||||||||||||| || ||||  ||||||||||||||
Sbjct: 143285 gcccacgccaaggaaggggacaccttcttcctcatcac 143322
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 1e-19
 Identities = 176/217 (81%)
 Strand = Plus / Plus

                                                                            
Query: 224      caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 283
                |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 15734828 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 15734887

                                                                            
Query: 284      gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 343
                 |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 15734888 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 15734947

                                                                            
Query: 344      acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 403
                |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 15734948 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 15735007

                                                     
Query: 404      atgataccttggctgaaggccgtgattatatattgct 440
                ||||||| |||| ||| || ||||| |||||| ||||
Sbjct: 15735008 atgatacattggttgagggtcgtgactatatactgct 15735044



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 127      ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccggcgcggcggag 186
                |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 15733544 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 15733603

                                                      
Query: 187      gcccacgccaaggagggtgacattttcttcctcatcac 224
                |||||||||||||| || ||||  ||||||||||||||
Sbjct: 15733604 gcccacgccaaggaaggggacaccttcttcctcatcac 15733641
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 1e-19
 Identities = 176/217 (81%)
 Strand = Plus / Plus

                                                                            
Query: 224      caaacaggtggtggcagagttggattgattatgttattcaggattcggctggtgtaccaa 283
                |||| ||||||||||| ||||||||||||||||| ||||| |||| ||||  |  | | |
Sbjct: 15822205 caaataggtggtggcaaagttggattgattatgtcattcaagatttggctaattcaacga 15822264

                                                                            
Query: 284      gtaatggttctcatcatcatgaattcggttcaaatactcctagaaggccaggagctattg 343
                 |||||||||||||||||||||    ||||| ||   ||  ||||| |||||||| ||||
Sbjct: 15822265 ataatggttctcatcatcatgagcatggttctaacgttctgagaagaccaggagcaattg 15822324

                                                                            
Query: 344      acaatacaaatttgttggatgacatggcatctgaagtctccgacatgcagattgagctac 403
                |||||||| ||||| | ||||| |  ||||||||||||||  | ||| ||||||| ||||
Sbjct: 15822325 acaatacagatttgatagatgatactgcatctgaagtctcgaatatggagattgaactac 15822384

                                                     
Query: 404      atgataccttggctgaaggccgtgattatatattgct 440
                ||||||| |||| ||| || ||||| |||||| ||||
Sbjct: 15822385 atgatacattggttgagggtcgtgactatatactgct 15822421



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 85/98 (86%)
 Strand = Plus / Plus

                                                                            
Query: 127      ccggagcttcccgcggaggaggagatggcgctcatccgagatatcaccggcgcggcggag 186
                |||||| | |||||||||||||||| |||||| ||||| || ||||||| ||| || |||
Sbjct: 15820921 ccggaggtgcccgcggaggaggagagggcgctgatccgggacatcaccgtcgccgccgag 15820980

                                                      
Query: 187      gcccacgccaaggagggtgacattttcttcctcatcac 224
                |||||||||||||| || ||||  ||||||||||||||
Sbjct: 15820981 gcccacgccaaggaaggggacaccttcttcctcatcac 15821018
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>gb|AC069287.7| Homo sapiens BAC clone RP11-304M2 from 11, complete sequence
          Length = 199487

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 55    aacccaaccctaaccctagccc 76
             ||||||||||||||||||||||
Sbjct: 84015 aacccaaccctaaccctagccc 83994



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 55    aacccaaccctaaccctagccc 76
             ||||||||||||||||||||||
Sbjct: 83814 aacccaaccctaaccctagccc 83793



 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 55    aacccaaccctaaccctagccc 76
             ||||||||||||||||||||||
Sbjct: 83710 aacccaaccctaaccctagccc 83689
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>ref|XM_630566.1| Dictyostelium discoideum hypothetical protein (DDB0188963), partial
           mRNA
          Length = 2154

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 281 caagtaatggttctcatcatc 301
           |||||||||||||||||||||
Sbjct: 113 caagtaatggttctcatcatc 133
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>gb|AF034925.4| Leishmania major MEKK-related kinase (MRK1) gene, complete cds
          Length = 4289

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 136  cccgcggaggaggagatggcg 156
            |||||||||||||||||||||
Sbjct: 2774 cccgcggaggaggagatggcg 2794
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>gb|AC122806.4| Mus musculus BAC clone RP23-297C11 from 8, complete sequence
          Length = 184206

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   tgacattttcttcctcatcac 224
             |||||||||||||||||||||
Sbjct: 73756 tgacattttcttcctcatcac 73776
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     gctcctcgccggcgtcggcga 100
              |||||||||||||||||||||
Sbjct: 180906 gctcctcgccggcgtcggcga 180926
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>gb|AC107464.5| Homo sapiens BAC clone RP11-1191J2 from 4, complete sequence
          Length = 219357

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 55    aacccaaccctaaccctagcccaga 79
             ||||||||||||||||||| |||||
Sbjct: 96761 aacccaaccctaaccctagaccaga 96785
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>gb|AC091959.3| Homo sapiens chromosome 5 clone RP11-449H3, complete sequence
          Length = 155839

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 345   caatacaaatttgttggatga 365
             |||||||||||||||||||||
Sbjct: 98082 caatacaaatttgttggatga 98062
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>gb|AC107882.3| Homo sapiens chromosome 11, clone CTD-2019O4, complete sequence
          Length = 130916

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 281   caagtaatggttctcatcatcatga 305
             ||||||| |||||||||||||||||
Sbjct: 56316 caagtaaaggttctcatcatcatga 56340
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>gb|AC107886.2| Homo sapiens chromosome 11, clone CTD-3064C13, complete sequence
          Length = 133892

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 281   caagtaatggttctcatcatcatga 305
             ||||||| |||||||||||||||||
Sbjct: 14763 caagtaaaggttctcatcatcatga 14739
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>gb|AC091887.3| Homo sapiens chromosome 5 clone RP11-118M9, complete sequence
          Length = 171095

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 345    caatacaaatttgttggatga 365
              |||||||||||||||||||||
Sbjct: 169433 caatacaaatttgttggatga 169453
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>gb|AC154327.2| Mus musculus BAC clone RP23-289N10 from 14, complete sequence
          Length = 161835

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 215   tcctcatcacaaacaggtggtggca 239
             ||||||||| |||||||||||||||
Sbjct: 44042 tcctcatcagaaacaggtggtggca 44018
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>gb|AC140462.3| Mus musculus BAC clone RP23-13K8 from 14, complete sequence
          Length = 199933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 215  tcctcatcacaaacaggtggtggca 239
            ||||||||| |||||||||||||||
Sbjct: 3049 tcctcatcagaaacaggtggtggca 3073
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>emb|CR974443.6| M.truncatula DNA sequence from clone MTH2-35O18 on chromosome 3, complete
              sequence
          Length = 115456

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 339    tattgacaatacaaatttgtt 359
              |||||||||||||||||||||
Sbjct: 100769 tattgacaatacaaatttgtt 100749
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>gb|AC164555.2| Mus musculus BAC clone RP23-346G13 from chromosome 17, complete sequence
          Length = 211631

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    ggccaggagctattgacaat 348
              ||||||||||||||||||||
Sbjct: 169806 ggccaggagctattgacaat 169787
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>gb|AC092779.5| Oryza sativa chromosome 3 BAC OSJNBb0024N19 genomic sequence, complete
             sequence
          Length = 121849

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 61868 cccaaccctaaccctagccc 61849
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>gb|AC165327.4| Mus musculus chromosome 19, clone RP24-318N5, complete sequence
          Length = 191038

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 37878 cccaaccctaaccctagccc 37897
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 57       cccaaccctaaccctagccc 76
                ||||||||||||||||||||
Sbjct: 27117023 cccaaccctaaccctagccc 27117042
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>gb|AC126932.4| Mus musculus BAC clone RP24-80G20 from chromosome 3, complete sequence
          Length = 214712

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 11753 cccaaccctaaccctagccc 11734
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>gb|AC131113.4| Mus musculus BAC clone RP24-155C13 from chromosome 3, complete sequence
          Length = 173268

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 26745 cccaaccctaaccctagccc 26764
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>gb|DQ334060.1| Drosophila miranda CG10732 gene, partial cds
          Length = 1125

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 gagtcggagccggcaccgga 131
           ||||||||||||||||||||
Sbjct: 298 gagtcggagccggcaccgga 279
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>emb|AJ544897.1|TNI544897 Tetraodon nigroviridis tf2 gene for tissue factor 2, exons 1-7
          Length = 8747

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   cccaaccctaaccctagccc 76
            ||||||||||||||||||||
Sbjct: 5666 cccaaccctaaccctagccc 5647



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   cccaaccctaaccctagccc 76
            ||||||||||||||||||||
Sbjct: 5439 cccaaccctaaccctagccc 5458



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 57   cccaaccctaaccctagccc 76
            ||||||||||||||||||||
Sbjct: 5343 cccaaccctaaccctagccc 5324
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>gb|BC035098.1| Homo sapiens cDNA clone IMAGE:5261953
          Length = 2257

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   cccaaccctaaccctagccc 76
            ||||||||||||||||||||
Sbjct: 1468 cccaaccctaaccctagccc 1487
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>gb|AC018529.12| Homo sapiens, clone RP11-4B16, complete sequence
          Length = 185590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 89578 cccaaccctaaccctagccc 89559
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>gb|AC113579.3| Tetraodon nigroviridis clone GSTNA-27O10, complete sequence
          Length = 79804

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 39172 cccaaccctaaccctagccc 39191
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>emb|BX323560.16| Zebrafish DNA sequence from clone DKEY-265E15 in linkage group 4,
             complete sequence
          Length = 190574

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   catgaattcggttcaaatac 320
             ||||||||||||||||||||
Sbjct: 33292 catgaattcggttcaaatac 33311
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 57       cccaaccctaaccctagccc 76
                ||||||||||||||||||||
Sbjct: 27208346 cccaaccctaaccctagccc 27208365
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 174      cggcgcggcggaggcccacg 193
                ||||||||||||||||||||
Sbjct: 27377827 cggcgcggcggaggcccacg 27377846
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>dbj|AP004160.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1197_E09
          Length = 67368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   cggcgcggcggaggcccacg 193
             ||||||||||||||||||||
Sbjct: 23765 cggcgcggcggaggcccacg 23784
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>dbj|AP004188.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1493_H11
          Length = 106693

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   cggcgcggcggaggcccacg 193
             ||||||||||||||||||||
Sbjct: 92760 cggcgcggcggaggcccacg 92779
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>emb|AL596139.1|CNS07EGR BAC A of library A from Tetraodon nigroviridis, T-cell receptor alpha
             delta locus (germline)
          Length = 74861

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 26596 cccaaccctaaccctagccc 26615
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>dbj|AK110845.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B11, full
           insert sequence
          Length = 2070

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 cggcgcggcggaggcccacg 193
           ||||||||||||||||||||
Sbjct: 327 cggcgcggcggaggcccacg 308
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>dbj|AK109266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B07, full
           insert sequence
          Length = 842

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 cggcgcggcggaggcccacg 193
           ||||||||||||||||||||
Sbjct: 324 cggcgcggcggaggcccacg 305
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>gb|AC154260.2| Mus musculus BAC clone RP24-225C5 from 17, complete sequence
          Length = 187652

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    ggccaggagctattgacaat 348
              ||||||||||||||||||||
Sbjct: 166304 ggccaggagctattgacaat 166323
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 79      agctcctcgccggcgtcggc 98
               ||||||||||||||||||||
Sbjct: 2479242 agctcctcgccggcgtcggc 2479261
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>gb|AF037030.1|AF037030 Zea mays 6-phosphogluconate dehydrogenase isoenzyme B mRNA, partial
           cds
          Length = 634

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 ggaggaggagatggcgctca 160
           ||||||||||||||||||||
Sbjct: 90  ggaggaggagatggcgctca 109
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>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the
             paromomycin biosynthesis gene cluster, strain NRRL 2455
          Length = 48169

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    ctcgccggcgtcggcgatgg 103
             ||||||||||||||||||||
Sbjct: 45520 ctcgccggcgtcggcgatgg 45501
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>emb|AL645987.7| Mouse DNA sequence from clone RP23-27B20 on chromosome 11 Contains a
             eukaryotic translation initiation factor 3, subunit 2
             (beta) (Eif3s2) pseudogene, a novel protein (MOR256-1)
             similar to the olfactory receptor family and a novel
             protein (MOR256-28) similar to the olfactory receptor
             family, complete sequence
          Length = 99868

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 57    cccaaccctaaccctagccc 76
             ||||||||||||||||||||
Sbjct: 62767 cccaaccctaaccctagccc 62748


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,957,515
Number of Sequences: 3902068
Number of extensions: 3957515
Number of successful extensions: 85239
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84746
Number of HSP's gapped (non-prelim): 493
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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