ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073981.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 3e-54
2dbj|AK102984.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 7e-52
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 143 6e-31
4gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome... 143 6e-31
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
6ref|NM_187605.1| Oryza sativa (japonica cultivar-group), predic... 90 7e-15
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
8dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.100
9gb|AC149394.2| Phakopsora pachyrhizi clone JGIAFNA-61H10, comple... 44 0.39
10gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, comp... 44 0.39
11dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.39
13gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, co... 44 0.39
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.39
15emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial se... 44 0.39
16gb|AY843027.1| Aplysia californica adenylate cyclase (aplA) mRNA... 40 6.1
17gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete seq... 40 6.1
18ref|NM_188290.1| Oryza sativa (japonica cultivar-group), predic... 40 6.1
19gb|AC152566.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 6.1
20gb|AC121285.7| Mus musculus chromosome 3, clone RP23-437I18, com... 40 6.1
21gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.1
22gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosom... 40 6.1
23gb|AC093336.13| Mus musculus chromosome 1, clone RP23-40E2, comp... 40 6.1
24gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Ho... 40 6.1
25ref|XM_540818.2| PREDICTED: Canis familiaris similar to B-cell s... 40 6.1
26emb|CR788308.9| Zebrafish DNA sequence from clone DKEY-192K19 in... 40 6.1
27gb|BC055005.1| Mus musculus phospholipase C, eta 1, mRNA (cDNA c... 40 6.1
28emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.1
29gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete seq... 40 6.1
30ref|NM_183191.1| Mus musculus phospholipase C, eta 1 (Plch1), mRNA 40 6.1
31dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.1
32gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, com... 40 6.1
33gb|AY691174.1| Mus musculus phospholipase C-eta1c mRNA, complete... 40 6.1
34gb|AY691173.1| Mus musculus phospholipase C-eta1b mRNA, complete... 40 6.1
35gb|AY691172.1| Mus musculus phospholipase C-eta1a mRNA, complete... 40 6.1
36dbj|AK005881.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.1
37dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
39gb|AF250835.1|AF250835 Mus musculus TFIIA-alpha/beta-like factor... 40 6.1
40gb|AC022368.2|AC022368 Mus musculus strain C57BL6/J clone RP23-1... 40 6.1
41dbj|AK173095.1| Mus musculus mRNA for mKIAA1069 protein 40 6.1
42ref|XM_227208.3| PREDICTED: Rattus norvegicus similar to Hypothe... 40 6.1
43dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
44gb|BC050756.1| Mus musculus general transcription factor II A, 1... 40 6.1
45gb|AC154459.2| Mus musculus BAC clone RP24-162O6 from 17, comple... 40 6.1
46gb|AC116797.11| Mus musculus chromosome 13, clone RP24-327I15, c... 40 6.1
47gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, com... 40 6.1
48ref|NM_023630.1| Mus musculus general transcription factor II A,... 40 6.1
49gb|AC109464.2| Homo sapiens chromosome 5 clone RP11-284A20, comp... 40 6.1
50gb|AC166350.4| Mus musculus BAC clone RP24-220P10 from chromosom... 40 6.1
51emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chr... 40 6.1
52emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chro... 40 6.1 
>dbj|AK073981.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076C04, full
           insert sequence
          Length = 4184

 Score =  220 bits (111), Expect = 3e-54
 Identities = 292/351 (83%), Gaps = 6/351 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 ccgccgccaaagatgttctcgccggcgatcaggaagccccacct---ccaccgcagggag 162
           |||||||||||||||||||| |||||||||| ||||||||||||   |||||||||||| 
Sbjct: 92  ccgccgccaaagatgttctccccggcgatcaagaagccccacctgctccaccgcagggac 151

                                                                       
Query: 163 aaggaggaggcgaccccttcaccccctcctcctgctcccgtccactccccttcgcccggt 222
           |||||||||||| |||| |||||||||||    |||||||  ||| | ||  ||||  ||
Sbjct: 152 aaggaggaggcgtccccctcaccccctccc---gctcccgcgcacacgcccgcgcctcgt 208

                                                                       
Query: 223 ggattcgccctctccgaccgccccgccactggcaccccggccccatggacctcctcctcc 282
           ||||| ||| ||  ||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 209 ggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctcc 268

                                                                       
Query: 283 ctccttgccaggatttcgacatcaaagcagacagacagggctggcgattctggccagatc 342
           || || ||||||||||| |||||||  |  ||||||||| | || |||||||||||||||
Sbjct: 269 ctgctcgccaggatttcaacatcaacacgaacagacaggacaggggattctggccagatc 328

                                                                       
Query: 343 caaccagtgcacgtagcagagtttccccaagttgtgaggaatgcacaagccaaccttctg 402
           ||||| ||||| ||| | || ||||||||| | ||  | ||||| |||||||||||||||
Sbjct: 329 caaccggtgcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctg 388

                                                              
Query: 403 cagaagaattttgcaggcaagagtatgcttgtaggcggcattgacaaagaa 453
           || |||| |||| | ||||| |  |||||||  || |||||||| ||||||
Sbjct: 389 caaaagagtttttccggcaaaaacatgcttgctggtggcattgataaagaa 439



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 60 aaggccggctagtcggagag 79
          ||||||||||||||||||||
Sbjct: 31 aaggccggctagtcggagag 50
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>dbj|AK102984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116A08, full
           insert sequence
          Length = 1930

 Score =  212 bits (107), Expect = 7e-52
 Identities = 291/351 (82%), Gaps = 6/351 (1%)
 Strand = Plus / Plus

                                                                       
Query: 106 ccgccgccaaagatgttctcgccggcgatcaggaagccccacct---ccaccgcagggag 162
           |||||||||||||||||||| || ||||||| ||||||||||||   |||||||||||| 
Sbjct: 92  ccgccgccaaagatgttctccccagcgatcaagaagccccacctgctccaccgcagggac 151

                                                                       
Query: 163 aaggaggaggcgaccccttcaccccctcctcctgctcccgtccactccccttcgcccggt 222
           |||||||||||| |||| ||||||||||     |||||||  ||| | ||  ||||  ||
Sbjct: 152 aaggaggaggcgtccccctcaccccctcac---gctcccgcgcacacgcccgcgcctcgt 208

                                                                       
Query: 223 ggattcgccctctccgaccgccccgccactggcaccccggccccatggacctcctcctcc 282
           ||||| ||| ||  ||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 209 ggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctcc 268

                                                                       
Query: 283 ctccttgccaggatttcgacatcaaagcagacagacagggctggcgattctggccagatc 342
           || || ||||||||||| |||||||  |  ||||||||| | || |||||||||||||||
Sbjct: 269 ctgctcgccaggatttcaacatcaacacgaacagacaggacaggggattctggccagatc 328

                                                                       
Query: 343 caaccagtgcacgtagcagagtttccccaagttgtgaggaatgcacaagccaaccttctg 402
           ||||| ||||| ||| | || ||||||||| | ||  | ||||| |||||||||||||||
Sbjct: 329 caaccggtgcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctg 388

                                                              
Query: 403 cagaagaattttgcaggcaagagtatgcttgtaggcggcattgacaaagaa 453
           || |||| |||| | |||||||  |||||||  || |||||||| ||||||
Sbjct: 389 caaaagagtttttccggcaagaacatgcttgctggtggcattgataaagaa 439



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 60 aaggccggctagtcggagag 79
          ||||||||||||||||||||
Sbjct: 31 aaggccggctagtcggagag 50
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  143 bits (72), Expect = 6e-31
 Identities = 163/192 (84%), Gaps = 6/192 (3%)
 Strand = Plus / Plus

                                                                           
Query: 106     ccgccgccaaagatgttctcgccggcgatcaggaagccccac---ctccaccgcagggag 162
               |||||||||||||||||||| |||||||||| ||||||||||   |||||||||||||| 
Sbjct: 6541610 ccgccgccaaagatgttctccccggcgatcaagaagccccacctgctccaccgcagggac 6541669

                                                                           
Query: 163     aaggaggaggcgaccccttcaccccctcctcctgctcccgtccactccccttcgcccggt 222
               |||||||||||| |||| ||||||   ||||| |||||||  ||| | ||  ||||  ||
Sbjct: 6541670 aaggaggaggcgtccccctcaccc---cctcccgctcccgcgcacacgcccgcgcctcgt 6541726

                                                                           
Query: 223     ggattcgccctctccgaccgccccgccactggcaccccggccccatggacctcctcctcc 282
               ||||| ||| ||  ||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 6541727 ggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctcc 6541786

                           
Query: 283     ctccttgccagg 294
               || || ||||||
Sbjct: 6541787 ctgctcgccagg 6541798



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                           
Query: 291     caggatttcgacatcaaagcagacagacagggctggcgattctggccagatccaaccagt 350
               ||||||||| |||||||  |  ||||||||| | || |||||||||||||||||||| ||
Sbjct: 6541999 caggatttcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggt 6542058

                                                                           
Query: 351     gcacgtagcagagtttccccaagttgtgaggaatgcacaagccaaccttctgcagaagaa 410
               ||| ||| | || ||||||||| | ||  | ||||| ||||||||||||||||| |||| 
Sbjct: 6542059 gcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagag 6542118

                   
Query: 411     tttt 414
               ||||
Sbjct: 6542119 tttt 6542122



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 13      ctcaaaacactagtaaaaccctagcccaccggagggagcgccga 56
               |||||||||||  ||||||||||||| ||||||| |||||||||
Sbjct: 6541485 ctcaaaacactcctaaaaccctagcctaccggagcgagcgccga 6541528



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      aaggccggctagtcggagag 79
               ||||||||||||||||||||
Sbjct: 6541549 aaggccggctagtcggagag 6541568
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>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0081P02, complete sequence
          Length = 162425

 Score =  143 bits (72), Expect = 6e-31
 Identities = 163/192 (84%), Gaps = 6/192 (3%)
 Strand = Plus / Plus

                                                                         
Query: 106   ccgccgccaaagatgttctcgccggcgatcaggaagccccac---ctccaccgcagggag 162
             |||||||||||||||||||| |||||||||| ||||||||||   |||||||||||||| 
Sbjct: 84372 ccgccgccaaagatgttctccccggcgatcaagaagccccacctgctccaccgcagggac 84431

                                                                         
Query: 163   aaggaggaggcgaccccttcaccccctcctcctgctcccgtccactccccttcgcccggt 222
             |||||||||||| |||| ||||||   ||||| |||||||  ||| | ||  ||||  ||
Sbjct: 84432 aaggaggaggcgtccccctcaccc---cctcccgctcccgcgcacacgcccgcgcctcgt 84488

                                                                         
Query: 223   ggattcgccctctccgaccgccccgccactggcaccccggccccatggacctcctcctcc 282
             ||||| ||| ||  ||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 84489 ggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctcc 84548

                         
Query: 283   ctccttgccagg 294
             || || ||||||
Sbjct: 84549 ctgctcgccagg 84560



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                         
Query: 291   caggatttcgacatcaaagcagacagacagggctggcgattctggccagatccaaccagt 350
             ||||||||| |||||||  |  ||||||||| | || |||||||||||||||||||| ||
Sbjct: 84761 caggatttcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggt 84820

                                                                         
Query: 351   gcacgtagcagagtttccccaagttgtgaggaatgcacaagccaaccttctgcagaagaa 410
             ||| ||| | || ||||||||| | ||  | ||||| ||||||||||||||||| |||| 
Sbjct: 84821 gcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagag 84880

                 
Query: 411   tttt 414
             ||||
Sbjct: 84881 tttt 84884



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                         
Query: 13    ctcaaaacactagtaaaaccctagcccaccggagggagcgccga 56
             |||||||||||  ||||||||||||| ||||||| |||||||||
Sbjct: 84247 ctcaaaacactcctaaaaccctagcctaccggagcgagcgccga 84290



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    aaggccggctagtcggagag 79
             ||||||||||||||||||||
Sbjct: 84311 aaggccggctagtcggagag 84330
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  143 bits (72), Expect = 6e-31
 Identities = 163/192 (84%), Gaps = 6/192 (3%)
 Strand = Plus / Plus

                                                                           
Query: 106     ccgccgccaaagatgttctcgccggcgatcaggaagccccac---ctccaccgcagggag 162
               |||||||||||||||||||| |||||||||| ||||||||||   |||||||||||||| 
Sbjct: 6540823 ccgccgccaaagatgttctccccggcgatcaagaagccccacctgctccaccgcagggac 6540882

                                                                           
Query: 163     aaggaggaggcgaccccttcaccccctcctcctgctcccgtccactccccttcgcccggt 222
               |||||||||||| |||| ||||||   ||||| |||||||  ||| | ||  ||||  ||
Sbjct: 6540883 aaggaggaggcgtccccctcaccc---cctcccgctcccgcgcacacgcccgcgcctcgt 6540939

                                                                           
Query: 223     ggattcgccctctccgaccgccccgccactggcaccccggccccatggacctcctcctcc 282
               ||||| ||| ||  ||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct: 6540940 ggatttgccgtccacgaccgccccgccaccggcaccccggcgccgtggacctcctcctcc 6540999

                           
Query: 283     ctccttgccagg 294
               || || ||||||
Sbjct: 6541000 ctgctcgccagg 6541011



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 103/124 (83%)
 Strand = Plus / Plus

                                                                           
Query: 291     caggatttcgacatcaaagcagacagacagggctggcgattctggccagatccaaccagt 350
               ||||||||| |||||||  |  ||||||||| | || |||||||||||||||||||| ||
Sbjct: 6541212 caggatttcaacatcaacacgaacagacaggacaggggattctggccagatccaaccggt 6541271

                                                                           
Query: 351     gcacgtagcagagtttccccaagttgtgaggaatgcacaagccaaccttctgcagaagaa 410
               ||| ||| | || ||||||||| | ||  | ||||| ||||||||||||||||| |||| 
Sbjct: 6541272 gcatgtatccgaatttccccaaatagttcgaaatgctcaagccaaccttctgcaaaagag 6541331

                   
Query: 411     tttt 414
               ||||
Sbjct: 6541332 tttt 6541335



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                           
Query: 13      ctcaaaacactagtaaaaccctagcccaccggagggagcgccga 56
               |||||||||||  ||||||||||||| ||||||| |||||||||
Sbjct: 6540698 ctcaaaacactcctaaaaccctagcctaccggagcgagcgccga 6540741



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      aaggccggctagtcggagag 79
               ||||||||||||||||||||
Sbjct: 6540762 aaggccggctagtcggagag 6540781
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>ref|NM_187605.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3744

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 313 acagacagggctggcgattctggccagatccaaccagtgcacgtagcagagtttccccaa 372
           ||||||||| | || |||||||||||||||||||| ||||| ||| | || |||||||||
Sbjct: 25  acagacaggacaggggattctggccagatccaaccggtgcatgtatccgaatttccccaa 84

                                                                       
Query: 373 gttgtgaggaatgcacaagccaaccttctgcagaagaattttgcaggcaagagtatgctt 432
            | ||  | ||||| ||||||||||||||||| |||| |||| | |||||||  ||||||
Sbjct: 85  atagttcgaaatgctcaagccaaccttctgcaaaagagtttttccggcaagaacatgctt 144

                                
Query: 433 gtaggcggcattgacaaagaa 453
           |  || |||||||| ||||||
Sbjct: 145 gctggtggcattgataaagaa 165
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 188      ctcctcctgctcccgtccactcc 210
                |||||||||||||||||||||||
Sbjct: 22839583 ctcctcctgctcccgtccactcc 22839605
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>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0006O15
          Length = 139723

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 188   ctcctcctgctcccgtccactcc 210
             |||||||||||||||||||||||
Sbjct: 72921 ctcctcctgctcccgtccactcc 72943
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>gb|AC149394.2| Phakopsora pachyrhizi clone JGIAFNA-61H10, complete sequence
          Length = 39352

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 403   cagaagaattttgcaggcaaga 424
             ||||||||||||||||||||||
Sbjct: 27036 cagaagaattttgcaggcaaga 27057
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>gb|AC093562.3| Homo sapiens chromosome 1 clone RP11-553F10, complete sequence
          Length = 205171

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 264    cccatggacctcctcctccctc 285
              ||||||||||||||||||||||
Sbjct: 134114 cccatggacctcctcctccctc 134135
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 176      ccccttcaccccctcctcctgctcccgtccactcccct 213
                ||||||| |||| ||||||| ||||| |||||||||||
Sbjct: 22032480 ccccttctccccttcctcctcctcccctccactcccct 22032517
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 125     cgccggcgatcaggaagcccca 146
               ||||||||||||||||||||||
Sbjct: 8924045 cgccggcgatcaggaagcccca 8924066
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>gb|AC003982.1|AC003982 Homo sapiens PAC clone 166H1 from 12q, complete sequence
          Length = 122302

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   tcaccccctcctcctgctcccg 202
             ||||||||||||||||||||||
Sbjct: 69180 tcaccccctcctcctgctcccg 69159
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 176      ccccttcaccccctcctcctgctcccgtccactcccct 213
                ||||||| |||| ||||||| ||||| |||||||||||
Sbjct: 21960825 ccccttctccccttcctcctcctcccctccactcccct 21960862
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>emb|AL731757.6|CNS08C86 Oryza sativa chromosome 12, . Partial sequence from BAC OJ1281_G01 of
            library Monsanto from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 69648

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 176  ccccttcaccccctcctcctgctcccgtccactcccct 213
            ||||||| |||| ||||||| ||||| |||||||||||
Sbjct: 2682 ccccttctccccttcctcctcctcccctccactcccct 2719
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>gb|AY843027.1| Aplysia californica adenylate cyclase (aplA) mRNA, complete cds
          Length = 5308

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 182  caccccctcctcctgctccc 201
            ||||||||||||||||||||
Sbjct: 5158 caccccctcctcctgctccc 5177
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>gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete sequence
          Length = 98801

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   catcaaagcagacagacagg 321
             ||||||||||||||||||||
Sbjct: 65086 catcaaagcagacagacagg 65067
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>ref|NM_188290.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1428

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 227  tcgccctctccgaccgccccgcca 250
            |||||||| |||||||||||||||
Sbjct: 1115 tcgccctcgccgaccgccccgcca 1138
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>gb|AC152566.1| Ornithorhynchus anatinus chromosome UNK clone OABb-111A1, complete
             sequence
          Length = 128808

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cccctcctcctgctcccgtc 204
             ||||||||||||||||||||
Sbjct: 20022 cccctcctcctgctcccgtc 20041
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>gb|AC121285.7| Mus musculus chromosome 3, clone RP23-437I18, complete sequence
          Length = 190736

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   cctccctccttgccaggatt 297
             ||||||||||||||||||||
Sbjct: 80635 cctccctccttgccaggatt 80616
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     cgcccggtggattcgccctc 234
               ||||||||||||||||||||
Sbjct: 2139385 cgcccggtggattcgccctc 2139404
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>gb|AC131798.3| Mus musculus BAC clone RP24-497K17 from chromosome 1, complete sequence
          Length = 142333

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    caccccctcctcctgctccc 201
              ||||||||||||||||||||
Sbjct: 106440 caccccctcctcctgctccc 106459
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>gb|AC093336.13| Mus musculus chromosome 1, clone RP23-40E2, complete sequence
          Length = 225053

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     aaaggaagaaactcaaaaca 21
             ||||||||||||||||||||
Sbjct: 44643 aaaggaagaaactcaaaaca 44662
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>gb|AC115410.4| Rattus norvegicus 2 BAC CH230-46P5 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 232501

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 178    ccttcaccccctcctcctgctccc 201
              |||||||||||||||||| |||||
Sbjct: 209723 ccttcaccccctcctccttctccc 209746
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>ref|XM_540818.2| PREDICTED: Canis familiaris similar to B-cell stimulating factor-3
           precursor (BSF-3) (Novel neurotrophin-1) (NNT-1)
           (LOC483697), mRNA
          Length = 931

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 ccccggccccatggacctcc 276
           ||||||||||||||||||||
Sbjct: 178 ccccggccccatggacctcc 197
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>emb|CR788308.9| Zebrafish DNA sequence from clone DKEY-192K19 in linkage group 3,
             complete sequence
          Length = 193615

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   tggacctcctcctccctcct 287
             ||||||||||||||||||||
Sbjct: 37172 tggacctcctcctccctcct 37153
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>gb|BC055005.1| Mus musculus phospholipase C, eta 1, mRNA (cDNA clone MGC:57096
            IMAGE:6491217), complete cds
          Length = 6299

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1825 cctccctccttgccaggatt 1806
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>emb|AL606632.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042L16,
             complete sequence
          Length = 163738

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    aacactagtaaaaccctagc 37
             ||||||||||||||||||||
Sbjct: 75082 aacactagtaaaaccctagc 75063
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>gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete sequence
          Length = 96721

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 302   catcaaagcagacagacagg 321
             ||||||||||||||||||||
Sbjct: 48539 catcaaagcagacagacagg 48558
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>ref|NM_183191.1| Mus musculus phospholipase C, eta 1 (Plch1), mRNA
          Length = 6299

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1825 cctccctccttgccaggatt 1806
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 319     agggctggcgattctggcca 338
               ||||||||||||||||||||
Sbjct: 3085313 agggctggcgattctggcca 3085294
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>gb|AC009335.10| Homo sapiens chromosome 17, clone RP11-20O2, complete sequence
          Length = 159611

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   caccccctcctcctgctccc 201
             ||||||||||||||||||||
Sbjct: 47185 caccccctcctcctgctccc 47204
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>gb|AY691174.1| Mus musculus phospholipase C-eta1c mRNA, complete cds
          Length = 6285

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1751 cctccctccttgccaggatt 1732
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>gb|AY691173.1| Mus musculus phospholipase C-eta1b mRNA, complete cds
          Length = 6308

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1751 cctccctccttgccaggatt 1732
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>gb|AY691172.1| Mus musculus phospholipase C-eta1a mRNA, complete cds
          Length = 6313

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1751 cctccctccttgccaggatt 1732
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>dbj|AK005881.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:1700011N16 product:general transcription
           factor IIA, 1-like factor, full insert sequence
          Length = 1594

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  gaggtggctgcagcacagct 102
           ||||||||||||||||||||
Sbjct: 615 gaggtggctgcagcacagct 596
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 18       aacactagtaaaaccctagc 37
                ||||||||||||||||||||
Sbjct: 21261608 aacactagtaaaaccctagc 21261589
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 227     tcgccctctccgaccgccccgcca 250
               |||||||| |||||||||||||||
Sbjct: 5507921 tcgccctcgccgaccgccccgcca 5507944
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>gb|AF250835.1|AF250835 Mus musculus TFIIA-alpha/beta-like factor mRNA, complete cds
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  gaggtggctgcagcacagct 102
           ||||||||||||||||||||
Sbjct: 608 gaggtggctgcagcacagct 589
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>gb|AC022368.2|AC022368 Mus musculus strain C57BL6/J clone RP23-192D21, complete sequence
          Length = 207757

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ctcctcctccctccttgcca 292
             ||||||||||||||||||||
Sbjct: 68336 ctcctcctccctccttgcca 68317
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>dbj|AK173095.1| Mus musculus mRNA for mKIAA1069 protein
          Length = 5071

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 278 cctccctccttgccaggatt 297
           ||||||||||||||||||||
Sbjct: 634 cctccctccttgccaggatt 615
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>ref|XM_227208.3| PREDICTED: Rattus norvegicus similar to Hypothetical protein MGC57096
            (LOC310463), mRNA
          Length = 6278

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  cctccctccttgccaggatt 297
            ||||||||||||||||||||
Sbjct: 1821 cctccctccttgccaggatt 1802
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1015E06
          Length = 164583

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 227    tcgccctctccgaccgccccgcca 250
              |||||||| |||||||||||||||
Sbjct: 104761 tcgccctcgccgaccgccccgcca 104784
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>gb|BC050756.1| Mus musculus general transcription factor II A, 1-like factor, mRNA
           (cDNA clone MGC:58209 IMAGE:6741860), complete cds
          Length = 1632

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  gaggtggctgcagcacagct 102
           ||||||||||||||||||||
Sbjct: 623 gaggtggctgcagcacagct 604
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>gb|AC154459.2| Mus musculus BAC clone RP24-162O6 from 17, complete sequence
          Length = 163506

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    gaggtggctgcagcacagct 102
             ||||||||||||||||||||
Sbjct: 24819 gaggtggctgcagcacagct 24800
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>gb|AC116797.11| Mus musculus chromosome 13, clone RP24-327I15, complete sequence
          Length = 145747

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   gtagcagagtttccccaagt 374
             ||||||||||||||||||||
Sbjct: 97899 gtagcagagtttccccaagt 97918
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>gb|AC102452.7| Mus musculus chromosome 5, clone RP24-272L20, complete sequence
          Length = 183858

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ctcctcctccctccttgcca 292
             ||||||||||||||||||||
Sbjct: 30487 ctcctcctccctccttgcca 30506
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>ref|NM_023630.1| Mus musculus general transcription factor II A, 1-like factor
           (Gtf2a1lf), mRNA
          Length = 1614

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  gaggtggctgcagcacagct 102
           ||||||||||||||||||||
Sbjct: 608 gaggtggctgcagcacagct 589
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>gb|AC109464.2| Homo sapiens chromosome 5 clone RP11-284A20, complete sequence
          Length = 161641

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    cccatggacctcctcctccc 283
              ||||||||||||||||||||
Sbjct: 123313 cccatggacctcctcctccc 123294
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>gb|AC166350.4| Mus musculus BAC clone RP24-220P10 from chromosome 17, complete sequence
          Length = 156954

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     gaggtggctgcagcacagct 102
              ||||||||||||||||||||
Sbjct: 150811 gaggtggctgcagcacagct 150792
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>emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chromosome 2, complete
             sequence
          Length = 184583

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ccccttcaccccctcctcct 195
             ||||||||||||||||||||
Sbjct: 19793 ccccttcaccccctcctcct 19774
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>emb|AL772386.4| Mouse DNA sequence from clone RP23-89G22 on chromosome 15, complete
              sequence
          Length = 149807

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    ttcaccccctcctcctgctc 199
              ||||||||||||||||||||
Sbjct: 145105 ttcaccccctcctcctgctc 145124


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,196,198
Number of Sequences: 3902068
Number of extensions: 5196198
Number of successful extensions: 131020
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 130516
Number of HSP's gapped (non-prelim): 499
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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