>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 268     tcggcatcctgtccgccggcgt 289
               ||||||||||||||||||||||
Sbjct: 1702856 tcggcatcctgtccgccggcgt 1702877

>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 224     caaggcgctcaacgtcatccgg 245
               ||||||||||||||||||||||
Sbjct: 1363201 caaggcgctcaacgtcatccgg 1363180

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 268     tcggcatcctgtccgccggcgt 289
               ||||||||||||||||||||||
Sbjct: 1589569 tcggcatcctgtccgccggcgt 1589590

>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 224     caaggcgctcaacgtcatccgg 245
               ||||||||||||||||||||||
Sbjct: 1366891 caaggcgctcaacgtcatccgg 1366870

>dbj|AB200320.1| Escherichia coli K12 puuB gene for gamma-Glutamylputrescine
           oxidase, complete cds
          Length = 1281

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 224 caaggcgctcaacgtcatccgg 245
           ||||||||||||||||||||||
Sbjct: 946 caaggcgctcaacgtcatccgg 925

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 178      cgtcgccttccccgtcctcgtc 199
                ||||||||||||||||||||||
Sbjct: 23751687 cgtcgccttccccgtcctcgtc 23751708

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 268     tcggcatcctgtccgccggcgt 289
               ||||||||||||||||||||||
Sbjct: 3184077 tcggcatcctgtccgccggcgt 3184056

>gb|U38543.1|ECU38543 Escherichia coli oxidoreductase (ordL) and GABA-aminotransferase
           (goaG) genes, complete cds
          Length = 2700

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 224 caaggcgctcaacgtcatccgg 245
           ||||||||||||||||||||||
Sbjct: 946 caaggcgctcaacgtcatccgg 925

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 178      cgtcgccttccccgtcctcgtc 199
                ||||||||||||||||||||||
Sbjct: 23679886 cgtcgccttccccgtcctcgtc 23679907

>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 128795

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 178  cgtcgccttccccgtcctcgtc 199
            ||||||||||||||||||||||
Sbjct: 3923 cgtcgccttccccgtcctcgtc 3902

>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    tgcgccgacgtcctgatcgcc 161
              |||||||||||||||||||||
Sbjct: 156052 tgcgccgacgtcctgatcgcc 156032

>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 141   tgcgccgacgtcctgatcgcc 161
             |||||||||||||||||||||
Sbjct: 79123 tgcgccgacgtcctgatcgcc 79103

>ref|XM_476094.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1140

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 21  gttcttgattgaccgatcgatctc 44
           |||||||||||| |||||||||||
Sbjct: 487 gttcttgattgatcgatcgatctc 464

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     cggcatcctgtccgccggcg 288
               ||||||||||||||||||||
Sbjct: 3789931 cggcatcctgtccgccggcg 3789950

>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
              complete sequence
          Length = 114135

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     gttcttgattgaccgatcgatctc 44
              |||||||||||| |||||||||||
Sbjct: 108022 gttcttgattgatcgatcgatctc 108045

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     cggcatcctgtccgccggcg 288
               ||||||||||||||||||||
Sbjct: 3790098 cggcatcctgtccgccggcg 3790117

>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04,
             complete sequence
          Length = 141171

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 21    gttcttgattgaccgatcgatctc 44
             |||||||||||| |||||||||||
Sbjct: 38832 gttcttgattgatcgatcgatctc 38855

>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 197    gtcctggcagccggggaggc 216
              ||||||||||||||||||||
Sbjct: 928147 gtcctggcagccggggaggc 928166

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 21      gttcttgattgaccgatcgatctc 44
               |||||||||||| |||||||||||
Sbjct: 5901258 gttcttgattgatcgatcgatctc 5901281

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    gcatcctgtccgccggcgtc 290
              ||||||||||||||||||||
Sbjct: 355813 gcatcctgtccgccggcgtc 355832

>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 275    cctgtccgccggcgtcctgc 294
              ||||||||||||||||||||
Sbjct: 288037 cctgtccgccggcgtcctgc 288018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,600,661
Number of Sequences: 3902068
Number of extensions: 2600661
Number of successful extensions: 42120
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41547
Number of HSP's gapped (non-prelim): 573
length of query: 427
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 405
effective length of database: 17,147,199,772
effective search space: 6944615907660
effective search space used: 6944615907660
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)