Clone Name | bastl04d03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2) | 28 | 8.5 |
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>JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 696 Score = 27.7 bits (60), Expect = 8.5 Identities = 13/44 (29%), Positives = 18/44 (40%) Frame = +2 Query: 2 PKPEQPTPTQSVGFWTSPAXXXXXXSPQARKGEARGLRQQAGRR 133 P P P P + P +ARK EARGL + ++ Sbjct: 609 PAPRSPVPAKQATLEPKPIVPKAEPKAKARKTEARGLSKAGAKK 652 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.128 0.351 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,575,250 Number of Sequences: 219361 Number of extensions: 259558 Number of successful extensions: 550 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 542 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 549 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)