>NOP14_HUMAN (P78316) Probable nucleolar complex protein 14|
          Length = 857

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = +1

Query: 256 SNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRI 435
           SNPFE   +R+KF +LG+K + +      SR+ A+ KR  TLLKE+++  KS+VF D+R 
Sbjct: 29  SNPFEVKVNRQKFQILGRKTRHDVGLPGVSRARALRKRTQTLLKEYKERDKSNVFRDKRF 88

Query: 436 GERDETLPEYEQAI----LRQQR 492
           GE +  +   E+ +    L QQR
Sbjct: 89  GEYNSNMSPEEKMMKRFALEQQR 111

>NOP14_MOUSE (Q8R3N1) Probable nucleolar complex protein 14|
          Length = 860

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
 Frame = +1

Query: 259 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIG 438
           NPFE   +R+KF +LG+K + +      SR+ A+ KR  TLLKE+++  KS+VF D+R G
Sbjct: 30  NPFEVKVNRQKFQILGRKTRHDVGLPGVSRARAIRKRTQTLLKEYKERNKSNVFADKRFG 89

Query: 439 ERDETLPEYEQAI----LRQQR 492
           E +  +   E+ +    L QQR
Sbjct: 90  EYNSNISPEEKMMKRFALEQQR 111

>NOP14_SCHPO (O43051) Probable nucleolar complex protein 14|
          Length = 827

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 26/78 (33%), Positives = 40/78 (51%)
 Frame = +1

Query: 259 NPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIG 438
           N F+  +++RKFDV G++ KG E +   SR      R  T+  E ++  +S    DRR G
Sbjct: 52  NLFDRQFTKRKFDVGGRRVKGTEGKPGVSRGVGEELRRRTIGAELKKRNRSGAIIDRRFG 111

Query: 439 ERDETLPEYEQAILRQQR 492
           E +  L   E+ + R  R
Sbjct: 112 ENNPHLSVEEKMLERFSR 129

>NOP14_YARLI (Q6C2F4) Probable nucleolar complex protein 14|
          Length = 832

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 21/81 (25%), Positives = 35/81 (43%)
 Frame = +1

Query: 250 ERSNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDR 429
           ++ NPF+   +R+K D+ G+  +G   R   S+      R      E +   +     DR
Sbjct: 50  QQFNPFDVKVARKKHDIGGRTVRGSVGRPGLSKLSGEEARMEARKLELQNKGRVGGVFDR 109

Query: 430 RIGERDETLPEYEQAILRQQR 492
           R GE D  +   E+ + R  R
Sbjct: 110 RFGEGDSNMNPEEKMLERFTR 130

>TRHY_SHEEP (P22793) Trichohyalin|
          Length = 1549

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
 Frame = +1

Query: 250  ERSNPFEAIWSR----RKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSV 417
            ER   F    SR    RKF    +  +  E +  R   D   + E  LL+E E+  +   
Sbjct: 984  ERDRKFREELSRQERDRKFREEEQLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQE 1043

Query: 418  FHDRRIGERDETLPEYEQAILRQQR 492
              DR+  E ++ L E E+ + RQ+R
Sbjct: 1044 -RDRKFREEEQLLQEREEQLRRQER 1067



 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +1

Query: 286  RKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEY 465
            RKF    +  +  E +  R   D   + E  LL+E E+  +     DR+  E ++ L E 
Sbjct: 1275 RKFREEEQLLQEREEQLRRQERDRKFREEEQLLQEREEQLRRQE-RDRKFREEEQLLKES 1333

Query: 466  EQAILRQQR 492
            E+ + RQ+R
Sbjct: 1334 EEQLRRQER 1342



 Score = 31.6 bits (70), Expect = 1.2
 Identities = 20/69 (28%), Positives = 33/69 (47%)
 Frame = +1

Query: 286  RKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEY 465
            RKF    +  +  E +  R   D   + E  LL+E E+  +     DR+  E ++ L E 
Sbjct: 1229 RKFHEEEQLLQEREEQLRRQERDRKFREEAQLLQEREEQLRRQE-RDRKFREEEQLLQER 1287

Query: 466  EQAILRQQR 492
            E+ + RQ+R
Sbjct: 1288 EEQLRRQER 1296



 Score = 28.9 bits (63), Expect = 7.8
 Identities = 20/80 (25%), Positives = 38/80 (47%)
 Frame = +1

Query: 253  RSNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRR 432
            R    E ++S+   + L +  + EE+R  R R     + E +L +E E+         RR
Sbjct: 1362 RRQELEGVFSQE--EQLRRAEQEEEQRRQRQRDRKFLEEEQSLQREREEEK-------RR 1412

Query: 433  IGERDETLPEYEQAILRQQR 492
            + E+D    E E+ + R+++
Sbjct: 1413 VQEQDRKFLEQEEQLHREEQ 1432

>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 285 PQVRRARQEAQGRGEAHLPLPLRRCPQEGEHPAQGVRAERQVVRLP*PAHRREGRDSARV 464
           P+ +R R++ +  G      P RR    G H     +A R  VR P     RE R     
Sbjct: 154 PRRQRLREQPRHAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRGPDEDQAREFRGPRHR 213

Query: 465 RTGHPPSA 488
           R  HPP+A
Sbjct: 214 RERHPPTA 221

>LOXL1_MOUSE (P97873) Lysyl oxidase homolog 1 precursor (EC 1.4.3.-) (Lysyl|
           oxidase-like protein 1) (Lysyl oxidase 2)
          Length = 607

 Score = 32.0 bits (71), Expect = 0.92
 Identities = 20/53 (37%), Positives = 25/53 (47%)
 Frame = +3

Query: 321 RGEAHLPLPLRRCPQEGEHPAQGVRAERQVVRLP*PAHRREGRDSARVRTGHP 479
           RGE    + L   PQ  +  +QG    RQ   LP P   R G D+ R +T HP
Sbjct: 68  RGETSSRVLLAGAPQTSQRRSQGGPRRRQAPSLPLPG--RVGSDTVRGQTRHP 118

>SBCC_PSEAE (Q9HWB8) Nuclease sbcCD subunit C|
          Length = 1211

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/51 (35%), Positives = 31/51 (60%)
 Frame = +1

Query: 340 RSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAILRQQR 492
           R ++D++ +R+  L KE++Q         RR+GE D+ + E EQA+L  +R
Sbjct: 507 RRQTDSL-ERQQALHKEWQQVLDQRAGLARRLGELDQRMVEQEQALLDLKR 556

>FILA_MOUSE (P11088) Filaggrin (Fragment)|
          Length = 336

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +3

Query: 288 QVRRARQEAQGRGEAHLPLPLRRCPQEGEHPAQGVRAERQVVRLP*PAHRREGRDSARVR 467
           Q +   Q  Q RG  H      +   E E P  G R ++   R    AH+ +GRDSAR R
Sbjct: 165 QHQHGHQHEQQRGHQHQ----HQHQHEHEQPESGHRQQQSSGRGHQGAHQEQGRDSARPR 220

Query: 468 ---TGHPPS 485
               GH  S
Sbjct: 221 GSNQGHSSS 229

>NOP14_CANGA (Q6FNV1) Probable nucleolar complex protein 14|
          Length = 799

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 13/94 (13%)
 Frame = +1

Query: 250 ERSNPFEAIWSRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFH-- 423
           +R NPFE   ++ K       RKG +       SD V   +  + K+  + A+   F   
Sbjct: 51  DRFNPFEVKTTKNK-------RKGGD--PGLLNSDRVAVGKPGISKQIGEEARRRAFEAK 101

Query: 424 -----------DRRIGERDETLPEYEQAILRQQR 492
                      D+R GERD+TL E E+ + R  R
Sbjct: 102 KLMKKRKGGVIDKRFGERDKTLTEEEKMLERFTR 135

>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
 Frame = +1

Query: 286  RKFDVLGKKRKGEERRTS-RSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPE 462
            RKF    ++R+ +ER    R   D   + E  LL+E E+         R++ E ++ L  
Sbjct: 1074 RKFREEEQQRRRQEREQQLRRERDRKFREEEQLLQEREEERLRRQERARKLREEEQLLRR 1133

Query: 463  YEQAILRQQR 492
             EQ +LRQ+R
Sbjct: 1134 EEQ-LLRQER 1142

>KRA42_HUMAN (Q9BYR5) Keratin-associated protein 4-2 (Keratin-associated protein|
           4.2) (Ultrahigh sulfur keratin-associated protein 4.2)
          Length = 136

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -2

Query: 376 CSPSCGQRRSGSGRCASPRPCASCRARRTCGA 281
           C PSCGQ       C  P  C S   R TC +
Sbjct: 101 CRPSCGQTTCCRTTCYRPSCCVSTCCRPTCSS 132

>PGTA_RAT (Q08602) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (Ra
          Length = 567

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 331 RTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAIL 480
           +TS  +++A        LK + QSA  +VF  R+ GE DE++ E    IL
Sbjct: 8   KTSEEQAEAKRLEREQKLKLY-QSATQAVFQKRQAGELDESVLELTSQIL 56

>PGTA_PONPY (Q5NVK5) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 331 RTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAIL 480
           +TS  +++A        LK + QSA  +VF  R+ GE DE++ E    IL
Sbjct: 8   KTSEEQAEAKRLEREQKLKLY-QSATQAVFQKRQAGELDESVLELTSQIL 56

>PGTA_HUMAN (Q92696) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 18/50 (36%), Positives = 27/50 (54%)
 Frame = +1

Query: 331 RTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAIL 480
           +TS  +++A        LK + QSA  +VF  R+ GE DE++ E    IL
Sbjct: 8   KTSEEQAEAKRLEREQKLKLY-QSATQAVFQKRQAGELDESVLELTSQIL 56

>B4GT4_MOUSE (Q9JJ04) Beta-1,4-galactosyltransferase 4 (EC 2.4.1.-)|
           (Beta-1,4-GalTase 4) (Beta4Gal-T4) (b4Gal-T4)
           (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 4) [Includes: N
          Length = 344

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -1

Query: 458 GRVSSLSPMRRSWKTDDLALCSNSLSRV 375
           GR+  L  M R WKTD L+ CS  L  V
Sbjct: 300 GRMKLLQQMSRVWKTDGLSSCSYRLLSV 327

>PGTA_MOUSE (Q9JHK4) Geranylgeranyl transferase type-2 alpha subunit (EC|
           2.5.1.60) (Geranylgeranyl transferase type II alpha
           subunit) (Rab geranylgeranyltransferase alpha subunit)
           (Rab geranyl-geranyltransferase alpha subunit) (Rab GG
           transferase alpha) (
          Length = 567

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 18/50 (36%), Positives = 26/50 (52%)
 Frame = +1

Query: 331 RTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAIL 480
           +TS  +++A        LK + QSA  +VF  R  GE DE++ E    IL
Sbjct: 8   KTSEEQAEAKRLEREQKLKLY-QSATQAVFQKREAGELDESVLELTSQIL 56

>IER5_MOUSE (O89113) Immediate early response gene 5 protein|
          Length = 308

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -2

Query: 403 RSARTP*AGCSPSCGQRRSGSGRCASPRPCASCRARRTCGATR 275
           R+ R P  GC P+  +R S  G  A P PC   R     G  R
Sbjct: 168 RAVRRP-CGCPPAVEERSSEDGSPAPPAPCPRKRGAAGVGGGR 209

>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/62 (27%), Positives = 35/62 (56%)
 Frame = +1

Query: 307  KKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGERDETLPEYEQAILRQ 486
            +KR+ +ER       + + + E  LL+E E+  +     +R+  ++DE L + E+ +LR+
Sbjct: 996  EKRRRQEREKKYREEEELQQEEEQLLRE-EREKRRRQEWERQYRKKDE-LQQEEEQLLRE 1053

Query: 487  QR 492
            +R
Sbjct: 1054 ER 1055

>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2386

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/48 (33%), Positives = 20/48 (41%)
 Frame = -2

Query: 430 AGHGRRTTWRSARTP*AGCSPSCGQRRSGSGRCASPRPCASCRARRTC 287
           A   RR   R A      C P C QR +     A+   CA C++  TC
Sbjct: 469 AACSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQCAWCQSTHTC 516

>APLP_MANSE (Q25490) Apolipophorins precursor [Contains: Apolipophorin-2|
            (Apolipophorin II) (apoLp-2); Apolipophorin-1
            (Apolipophorin I) (apoLp-1)]
          Length = 3305

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -2

Query: 376  CSPSCGQRRSGSGRCASPR-PCASCRARRTCGATRW 272
            C  + G RRS S  C  PR P  +C AR   G   W
Sbjct: 2962 CDLARGYRRSRSRGCCPPRCPTPACAARTATGPGSW 2997

>MS87F_DROME (P08175) Male-specific sperm protein Mst87F|
          Length = 56

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = -2

Query: 376 CSPSCGQRRSGSGRCASPRPCASCRARRTCG 284
           C   CG    G G C  P  C  C A   CG
Sbjct: 17  CCGPCGPCGGGCGPCYGPNVCGPCYACGPCG 47

>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7|
          Length = 1303

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = +1

Query: 280 SRRKFDVLGKKRKGEERRTSRSRSDAVHKRENTLLKEFEQSAKSSVFHDRRIGER 444
           S R+     KK + +E+R S+ R  + HKR  +   +F   +  S F     G R
Sbjct: 99  SHRRLKRKRKKEREKEKRRSKKRRKSKHKRHASSSDDFSDFSDDSDFSPSEKGHR 153

>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 25.0 bits (53), Expect(2) = 9.4
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -2

Query: 427 GHGRRTTWRSARTP*AGCSPSCGQRRSGSGR 335
           G GRR +WR  R    G + + G  R G GR
Sbjct: 564 GRGRRGSWRGGRR--GGGAGASGGGRGGRGR 592



 Score = 21.9 bits (45), Expect(2) = 9.4
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 5/28 (17%)
 Frame = -3

Query: 282 RPDGLEGV-----APLRRRGPARLHGHG 214
           R  GL G      +P  RRG  R  GHG
Sbjct: 598 RGSGLSGTREDAGSPSARRGEQRRRGHG 625


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,095,268
Number of Sequences: 219361
Number of extensions: 605381
Number of successful extensions: 3191
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3171
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3465624120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)