Clone Information

BLAST Search Result

Clone Name	bastl04d01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	DRL2_ARATH (P60839) Probable disease resistance protein At1g12290	49	8e-06
2	DRL1_ARATH (P60838) Probable disease resistance protein At1g12280	45	7e-05
3	DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360	44	3e-04
4	DRL3_ARATH (Q9LMP6) Probable disease resistance protein At1g15890	43	5e-04
5	DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350	42	0.001
6	DRL14_ARATH (Q9SI85) Probable disease resistance protein At1g626...	41	0.002
7	DRL5_ARATH (Q9C8K0) Probable disease resistance protein At1g51480	40	0.003
8	DRL33_ARATH (Q9FG90) Probable disease resistance protein At5g43740	40	0.004
9	DRL23_ARATH (O82484) Putative disease resistance protein At4g10780	39	0.009
10	DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260	39	0.009
11	DRL32_ARATH (Q9FG91) Probable disease resistance protein At5g43730	38	0.015
12	DRL31_ARATH (Q9FLB4) Putative disease resistance protein At5g05400	37	0.033
13	DRL40_ARATH (Q8RXS5) Probable disease resistance protein At5g630...	36	0.043
14	DRL37_ARATH (Q9LVT4) Probable disease resistance protein At5g47250	35	0.13
15	MEDB_GIALA (Q08014) Median body protein	35	0.13
16	RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase	34	0.22
17	DRL24_ARATH (O23317) Probable disease resistance protein At4g146...	33	0.37
18	P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precurso...	32	1.1
19	P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precur...	32	1.1
20	SYS_BACSK (Q5WM19) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	32	1.1
21	STXB4_HUMAN (Q6ZWJ1) Syntaxin-binding protein 4 (Syntaxin 4-inte...	31	1.4
22	JIP4_MOUSE (Q58A65) C-jun-amino-terminal kinase-interacting prot...	31	1.4
23	JIP4_HUMAN (O60271) C-jun-amino-terminal kinase-interacting prot...	31	1.4
24	P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precur...	30	2.4
25	P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precur...	30	2.4
26	MYSP_BOOMI (Q86RN8) Paramyosin	30	2.4
27	SYS_GEOKA (Q5L3Y0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--...	30	2.4
28	MYH9_RAT (Q62812) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (...	30	3.1
29	DRL16_ARATH (O22727) Putative disease resistance protein At1g61190	30	3.1
30	MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	30	3.1
31	SODE_MOUSE (O09164) Extracellular superoxide dismutase [Cu-Zn] p...	30	3.1
32	P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1....	30	3.1
33	RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance ...	30	4.1
34	HIBN_XENLA (P06180) Histone-binding protein N1/N2	29	5.3
35	MSH2_ARATH (O24617) DNA mismatch repair protein MSH2 (AtMsh2)	29	5.3
36	SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like ...	29	5.3
37	MYH9_MOUSE (Q8VDD5) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	29	5.3
38	MYH9_HUMAN (P35579) Myosin-9 (Myosin heavy chain, nonmuscle IIa)...	29	5.3
39	DYXC1_MOUSE (Q8R368) Dyslexia susceptibility 1 candidate gene 1 ...	29	5.3
40	UVRD_MYCPN (P75437) Probable DNA helicase II homolog (EC 3.6.1.-)	29	5.3
41	COBS_THETN (Q8RCN8) Cobalamin synthase (EC 2.-.-.-)	29	5.3
42	SBCC_RHOCA (O68032) Nuclease sbcCD subunit C	29	6.9
43	EPHB3_CHICK (Q07498) Ephrin type-B receptor 3 (EC 2.7.10.1) (Tyr...	29	6.9
44	MYSP_SARSC (Q9BMM8) Paramyosin	28	9.1
45	MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smoo...	28	9.1

>DRL2_ARATH (P60839) Probable disease resistance protein At1g12290|
          Length = 884

 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 25/76 (32%), Positives = 40/76 (52%)
 Frame = +3

Query: 186 FARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRL 365
           F R   Y+ +  + + +L   M++LK+ RDD+ R V TAE  GL+   Q+K WL+ V  +
Sbjct: 22  FCRKLYYIQNIKENLTSLEEAMEDLKALRDDLLRKVQTAEEGGLQRLHQIKVWLKRVKTI 81

Query: 366 EDAAARIHAEYQARLQ 413
           E     + +     LQ
Sbjct: 82  ESQFNDLDSSRTVELQ 97

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>DRL1_ARATH (P60838) Probable disease resistance protein At1g12280|
          Length = 894

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAE-RQGLEATSQVKRWLECVSRLEDAA 377
           GY+      + A+  +M+ LK KRDDVKR VD  E  +  E  SQV+ WL  VS +E+  
Sbjct: 27  GYICELSKNVVAMKKDMEVLKKKRDDVKRRVDIEEFTRRRERLSQVQGWLTNVSTVENKF 86

Query: 378 ARIHAEYQARLQ 413
             +     A LQ
Sbjct: 87  NELLTTNDAELQ 98

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>DRL20_ARATH (Q9SH22) Putative disease resistance protein At1g63360|
          Length = 884

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +3

Query: 156 DTAFRPLKDYFARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQV 335
           D     +  +      Y  +    + AL   M ELK+KRDD++R +   E +GL+  S+ 
Sbjct: 10  DPCVNKVSQWLDMKVSYTHNLEKNLAALEKTMKELKAKRDDLERRLKREEARGLQRLSEF 69

Query: 336 KRWLECVSRLEDAAARIHAEYQARLQ 413
           + WL+ V+ +ED    +  +    +Q
Sbjct: 70  QVWLDSVATVEDIIITLLRDRNVEIQ 95

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>DRL3_ARATH (Q9LMP6) Probable disease resistance protein At1g15890|
          Length = 921

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 22/68 (32%), Positives = 42/68 (61%)
 Frame = +3

Query: 204 YVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAAR 383
           Y++     ++AL + M EL+ +RDD+ R V   E +GL+  +QV+ WL   SR++D  ++
Sbjct: 98  YILKMEANLEALQNTMQELEERRDDLLRRVVIEEDKGLQRLAQVQGWL---SRVKDVCSQ 154

Query: 384 IHAEYQAR 407
           ++   +A+
Sbjct: 155 VNDLLKAK 162

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>DRL19_ARATH (Q9C8T9) Putative disease resistance protein At1g63350|
          Length = 898

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
 Frame = +3

Query: 234 ALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECV----SRLEDAAARIHAEYQ 401
           AL   M+ELK+KRDD+ R +   E +GL+   ++K WL  V    SR+ D     +AE Q
Sbjct: 36  ALETTMEELKAKRDDLLRKLKREEDRGLQTLGEIKVWLNRVETIESRVNDLLNARNAELQ 95

Query: 402 ARLQLPPDQAPGLRATYR 455
            RL L    +  L  +YR
Sbjct: 96  -RLCLCGFCSKSLTTSYR 112

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>DRL14_ARATH (Q9SI85) Probable disease resistance protein At1g62630 (pNd4)|
          Length = 893

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = +3

Query: 234 ALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQ 413
           AL   M+ELK+KRDD+ R +   E +GL+  S+ + WL  V+ +ED    +  +    +Q
Sbjct: 36  ALETTMEELKAKRDDLLRRLKREEDRGLQRLSEFQVWLNRVATVEDIIITLLRDRDVEIQ 95

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>DRL5_ARATH (Q9C8K0) Probable disease resistance protein At1g51480|
          Length = 854

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 21/55 (38%), Positives = 31/55 (56%)
 Frame = +3

Query: 204 YVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLE 368
           Y+      +D L   M+ELK+ RDD+ R V   E +GL+  +QVK W+  V  +E
Sbjct: 27  YIHKMEANLDDLHTTMEELKNGRDDLLRRVSIEEDKGLQQLAQVKGWISRVEIVE 81

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>DRL33_ARATH (Q9FG90) Probable disease resistance protein At5g43740|
          Length = 862

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
 Frame = +3

Query: 171 PLKDYFARTFGYVMSCGDYI-------DALGHEMDELKSKRDDVKRMVDTAERQGLEATS 329
           P    F    G  +S  +YI       DAL   M+ELK+ RDD+   V   E +GL+  +
Sbjct: 8   PWNQIFTAACGCFLSDRNYIHMMESNLDALQKTMEELKNGRDDLLGRVSIEEDKGLQRLA 67

Query: 330 QVKRWLECVSRLE 368
           QV  WL  V  +E
Sbjct: 68  QVNGWLSRVQIVE 80

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>DRL23_ARATH (O82484) Putative disease resistance protein At4g10780|
          Length = 892

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 21/51 (41%), Positives = 29/51 (56%)
 Frame = +3

Query: 204 YVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECV 356
           Y+    D I AL   +++L + RDDV R V   E +GLE   QV+ WL+ V
Sbjct: 28  YIHKLKDNIVALEKAIEDLTATRDDVLRRVQMEEGKGLERLQQVQVWLKRV 78

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>DRL38_ARATH (Q9LVT3) Putative disease resistance protein At5g47260|
          Length = 885

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 19/70 (27%), Positives = 36/70 (51%)
 Frame = +3

Query: 204 YVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAAR 383
           Y+ +    ++AL   M +L + R+D+ + +   E  GL+   +VK W+  V  +E  A R
Sbjct: 22  YLYNLERNLEALHKVMQDLNAMRNDLLKRLSKEEEIGLQGLQEVKEWISMVEEIEPKANR 81

Query: 384 IHAEYQARLQ 413
           +  E  + +Q
Sbjct: 82  LLDESVSEIQ 91

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>DRL32_ARATH (Q9FG91) Probable disease resistance protein At5g43730|
          Length = 848

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
 Frame = +3

Query: 171 PLKDYFARTFGYVMSCGDYI-------DALGHEMDELKSKRDDVKRMVDTAERQGLEATS 329
           P    F    G  +S  +YI       DAL   M+ELK+ RDD+   V   E +GL+  +
Sbjct: 9   PWNKIFTAACGCFLSDSNYIHLMESNLDALQKTMEELKNGRDDLLARVSIEEDKGLQRLA 68

Query: 330 QVKRWLECVSRLE 368
            V  WL  V  +E
Sbjct: 69  LVNGWLSRVQIVE 81

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>DRL31_ARATH (Q9FLB4) Putative disease resistance protein At5g05400|
          Length = 874

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = +3

Query: 141 VASIVDTAFRPLKDYFARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLE 320
           VA   D A   L    +R      +  D++ AL   + +L+++RDD+ + +   E +GL 
Sbjct: 7   VAISCDQAVNNLTSCLSRNQNRFRNLVDHVAALKKTVRQLEARRDDLLKRIKVQEDRGLN 66

Query: 321 ATSQVKRWL-ECVSRLEDA 374
              +V++WL E  SR+ +A
Sbjct: 67  LLDEVQQWLSEVESRVCEA 85

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>DRL40_ARATH (Q8RXS5) Probable disease resistance protein At5g63020 (pNd11)|
          Length = 888

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 18/66 (27%), Positives = 38/66 (57%)
 Frame = +3

Query: 192 RTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLED 371
           R   Y+    + + AL   +++++ +R+D+ R + + ER+GL+  S V+ W   VS++E 
Sbjct: 24  RNGDYIHGLEENLTALQRALEQIEQRREDLLRKILSEERRGLQRLSVVQGW---VSKVEA 80

Query: 372 AAARIH 389
              R++
Sbjct: 81  IVPRVN 86

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>DRL37_ARATH (Q9LVT4) Probable disease resistance protein At5g47250|
          Length = 843

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 20/86 (23%), Positives = 39/86 (45%)
 Frame = +3

Query: 150 IVDTAFRPLKDYFARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATS 329
           +V+  ++    Y     G +    + +  L    DELK++++DV   V+  E +G +  +
Sbjct: 7   VVEPCYKSALSYLCVKVGNICMLKENLVLLKSAFDELKAEKEDVVNRVNAGELKGGQRLA 66

Query: 330 QVKRWLECVSRLEDAAARIHAEYQAR 407
            V  WL  V  +E+   ++     AR
Sbjct: 67  IVATWLSQVEIIEENTKQLMDVASAR 92

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>MEDB_GIALA (Q08014) Median body protein|
          Length = 857

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
 Frame = +3

Query: 249 MDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSR-LEDAAARIHAEYQARL 410
           MD+L+ +RD+++R +DT  R+G   TS V   +E + R ++DA +   +E++ R+
Sbjct: 218 MDDLQRQRDELQRQLDTIRRRG--NTSGVMAEIENIQRQIDDANSSASSEHELRM 270

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>RAD50_HALVO (P62133) DNA double-strand break repair rad50 ATPase|
          Length = 893

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 20/60 (33%), Positives = 31/60 (51%)
 Frame = +3

Query: 228 IDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQAR 407
           +D+L  E+   +S+RD  K  +D AE    E   + +R  E  S +ED  A+I A+   R
Sbjct: 215 LDSLDEEISNYESQRDKAKSALDAAEATLDEHAEKRERLDEIESAIEDLTAKISADETKR 274

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>DRL24_ARATH (O23317) Probable disease resistance protein At4g14610 (pCol1)|
          Length = 719

 Score = 33.1 bits (74), Expect = 0.37
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQG 314
           GY+ S  + + AL   ++ LK+K DDVKR VD  E  G
Sbjct: 21  GYIHSLPENLAALQKAIEVLKTKHDDVKRRVDKEEFLG 58

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>P4HA1_RAT (P54001) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAA 380
           G+  S G   D + +E D + S +D +K     AE   LE   Q+K+W E + RL   A 
Sbjct: 20  GFFTSIGQMTDLIHNEKDLVTSLKDYIK-----AEEDKLE---QIKKWAEKLDRLTSTAT 71

Query: 381 R 383
           +
Sbjct: 72  K 72

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>P4HA1_MOUSE (Q60715) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 20/61 (32%), Positives = 30/61 (49%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAA 380
           G+  S G   D + +E D + S +D +K     AE   LE   Q+K+W E + RL   A 
Sbjct: 20  GFFTSIGQMTDLIHNEKDLVTSLKDYIK-----AEEDKLE---QIKKWAEKLDRLTSTAT 71

Query: 381 R 383
           +
Sbjct: 72  K 72

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>SYS_BACSK (Q5WM19) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 424

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = +3

Query: 246 EMDELKSKRDDVKRMVDTAERQGLEATS---QVKRWLECVSRLEDAAARIHAEYQARLQL 416
           E++ELKSKR+DV   +   +R   +A S   ++K+  E +   ++    I  E +A L  
Sbjct: 44  EVEELKSKRNDVSEQIAALKRDKKDANSLIAEMKQVSERIKEQDEQLRSIETELEALLLT 103

Query: 417 PPD 425
            P+
Sbjct: 104 IPN 106

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>STXB4_HUMAN (Q6ZWJ1) Syntaxin-binding protein 4 (Syntaxin 4-interacting|
           protein) (Synip)
          Length = 553

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/53 (32%), Positives = 30/53 (56%)
 Frame = +3

Query: 246 EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQA 404
           EM+ LK +RDD  + V+T + + LE+  Q K+  E +  ++  A  +  E +A
Sbjct: 296 EMERLKCERDDALKEVNTLKEKLLESDKQRKQLTEELQNVKQEAKAVVEETRA 348

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>JIP4_MOUSE (Q58A65) C-jun-amino-terminal kinase-interacting protein 4|
           (JNK-interacting protein 4) (JIP-4) (JNK-associated
           leucine-zipper protein) (JLP) (Sperm-associated antigen
           9) (Mitogen-activated protein kinase 8-interacting
           protein 4) (JNK/SAPK-asso
          Length = 1321

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +3

Query: 252 DELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQA 404
           D  + ++ D++  V++ E Q  +   + K + + +SRLE+  A +  EY A
Sbjct: 108 DSQEQEKKDLQTRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNA 158

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>JIP4_HUMAN (O60271) C-jun-amino-terminal kinase-interacting protein 4|
           (JNK-interacting protein 4) (JIP-4) (JNK-associated
           leucine-zipper protein) (JLP) (Sperm-associated antigen
           9) (Mitogen-activated protein kinase 8-interacting
           protein 4) (Human lung ca
          Length = 1321

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/51 (27%), Positives = 28/51 (54%)
 Frame = +3

Query: 252 DELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQA 404
           D  + ++ D++  V++ E Q  +   + K + + +SRLE+  A +  EY A
Sbjct: 108 DSQEQEKKDLQTRVESLESQTRQLELKAKNYADQISRLEEREAELKKEYNA 158

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>P4HA1_PONPY (Q5RAG8) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAA 380
           G+  S G   D +  E D + S +D +K     AE   LE   Q+K+W E + RL   A 
Sbjct: 20  GFFTSIGQMTDLIHTEKDLVTSLKDYIK-----AEEDKLE---QIKKWAEKLDRLTSTAT 71

Query: 381 R 383
           +
Sbjct: 72  K 72

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>P4HA1_HUMAN (P13674) Prolyl 4-hydroxylase alpha-1 subunit precursor (EC|
           1.14.11.2) (4-PH alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 534

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAA 380
           G+  S G   D +  E D + S +D +K     AE   LE   Q+K+W E + RL   A 
Sbjct: 20  GFFTSIGQMTDLIHTEKDLVTSLKDYIK-----AEEDKLE---QIKKWAEKLDRLTSTAT 71

Query: 381 R 383
           +
Sbjct: 72  K 72

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>MYSP_BOOMI (Q86RN8) Paramyosin|
          Length = 873

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/71 (28%), Positives = 36/71 (50%)
 Frame = +3

Query: 246 EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQLPPD 425
           E+  L+++RD++      AE      T + +   +C  RL    A++  EY+ RLQ+  +
Sbjct: 451 EIKRLENERDELAAAYKEAE------TLRKQEEAKC-QRLTAELAQVRHEYERRLQIKEE 503

Query: 426 QAPGLRATYRL 458
           +   LR  Y+L
Sbjct: 504 EIEALRKQYQL 514



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = +3

Query: 228 IDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQAR 407
           I  L HE ++++ +RD ++R          E    V    E  S+L DA  R+H EY+  
Sbjct: 403 IQKLQHEYEKMREQRDALQR----------ENKKLVDDLSEAKSQLADAIRRLH-EYELE 451

Query: 408 LQLPPDQAPGLRATYR 455
           ++   ++   L A Y+
Sbjct: 452 IKRLENERDELAAAYK 467

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>SYS_GEOKA (Q5L3Y0) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)|
           (SerRS)
          Length = 424

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 15/53 (28%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
 Frame = +3

Query: 246 EMDELKSKRDDVKRMVDTAERQGLEA---TSQVKRWLECVSRLEDAAARIHAE 395
           E++ELKSKR+DV + +   +R+  +A    +Q++   + + R+++   ++ AE
Sbjct: 44  EVEELKSKRNDVSQQIAVLKREKKDAEPLIAQMREVGDRIKRMDEQIRQLEAE 96

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>MYH9_RAT (Q62812) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1960

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 246  EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQL 416
            EM++L S +DDV + V   E+       QV+   E  ++LE+    + A   A+L+L
Sbjct: 1505 EMEDLMSSKDDVGKSVHELEKSNRALEQQVE---EMKTQLEELEDELQATEDAKLRL 1558

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>DRL16_ARATH (O22727) Putative disease resistance protein At1g61190|
          Length = 967

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +3

Query: 201 GYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLE 368
           GY+ +    + AL  EM++L++ + +V+  V   E +  +    V+ WL+ V+ ++
Sbjct: 26  GYIRNLEKNLRALQREMEDLRATQHEVQNKVAREESRHQQRLEAVQVWLDRVNSID 81

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>MYH9_CHICK (P14105) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = +3

Query: 246  EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQLPPD 425
            EM++L S +DDV + V   E+       QV+   E  ++LE+    + A   A+L+L  +
Sbjct: 1505 EMEDLMSSKDDVGKSVHELEKAKRALEQQVE---EMKTQLEELEDELQATEDAKLRLEVN 1561

Query: 426  Q 428
            Q
Sbjct: 1562 Q 1562

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>SODE_MOUSE (O09164) Extracellular superoxide dismutase [Cu-Zn] precursor (EC|
           1.15.1.1) (EC-SOD)
          Length = 251

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
 Frame = +3

Query: 240 GHEMDELKSKRDDVKRM--VDTAERQGLEATSQVKRWLECVSRLEDAAARIHA--EYQAR 407
           G    +L  + D V+++  +D  E+ G      ++ W+E   R E  AA +HA    Q  
Sbjct: 23  GESSFDLADRLDPVEKIDRLDLVEKIGDTHAKVLEIWMELGRRREVDAAEMHAICRVQPS 82

Query: 408 LQLPPDQ 428
             LPPDQ
Sbjct: 83  ATLPPDQ 89

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>P4HA1_CHICK (P16924) Prolyl 4-hydroxylase alpha-1 subunit (EC 1.14.11.2) (4-PH|
           alpha-1)
           (Procollagen-proline,2-oxoglutarate-4-dioxygenase
           alpha-1 subunit)
          Length = 516

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = +3

Query: 222 DYIDALGHEMDELKSKRDDV-KRMVD--TAERQGLEATSQVKRWLECVSRLEDAAAR 383
           D+  ++GH  D + +++D V  ++ D   AE   LE   Q+K+W E + +L D A +
Sbjct: 3   DFFTSIGHMTDLINTEKDLVISKLKDYIKAEESKLE---QIKKWAEKLDKLTDTATK 56

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>RPS2_ARATH (Q42484) Disease resistance protein RPS2 (Resistance to Pseudomonas|
           syringae protein 2)
          Length = 909

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 21/96 (21%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
 Frame = +3

Query: 132 MEFVASIVDTAFRPLKDYF--ARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAE 305
           M+F++S++    + L +    A   G+       I  L   + +LK+ RDD+   +    
Sbjct: 1   MDFISSLIVGCAQVLCESMNMAERRGHKTDLRQAITDLETAIGDLKAIRDDLTLRIQQDG 60

Query: 306 RQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQ 413
            +G   +++ + WL  V   E   A +   ++ R Q
Sbjct: 61  LEGRSCSNRAREWLSAVQVTETKTALLLVRFRRREQ 96

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>HIBN_XENLA (P06180) Histone-binding protein N1/N2|
          Length = 589

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +3

Query: 213 SCGDYIDALGHEMDELKSKRDDVKRMVDTAERQGLEAT 326
           S G+ +D +  EMDELK    D+K  ++ ++     AT
Sbjct: 442 SVGELVDEVKKEMDELKDLLPDIKEKIEDSKEAQKNAT 479

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>MSH2_ARATH (O24617) DNA mismatch repair protein MSH2 (AtMsh2)|
          Length = 937

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
 Frame = +3

Query: 246 EMDELKSKRDDVKRMVDTAE-----RQGLEATSQVKRWLECVSRLEDAAARIHAEYQARL 410
           +++E+K++ D V+  V+ A      RQ L+  S V+R L  + R       I   YQ+ +
Sbjct: 346 DLNEIKTRLDIVQCFVEEAGLRQDLRQHLKRISDVERLLRSLERRRGGLQHIIKLYQSTI 405

Query: 411 QLP 419
           +LP
Sbjct: 406 RLP 408

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>SMC2_HUMAN (O95347) Structural maintenance of chromosome 2-like 1 protein|
           (Chromosome-associated protein E) (hCAP-E) (XCAP-E
           homolog)
          Length = 1197

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +3

Query: 237 LGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLE 350
           L H   ELK+K+ +VK+M D+  R+  EA   VKR  E
Sbjct: 423 LKHAQQELKNKQAEVKKM-DSGYRKDQEALEAVKRLKE 459

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>MYH9_MOUSE (Q8VDD5) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 246  EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQL 416
            EM++L S +DDV + V   E+       QV+   E  ++LE+    + A   A+L+L
Sbjct: 1504 EMEDLMSSKDDVGKSVHELEKSKRALEQQVE---EMKTQLEELEDELQATEDAKLRL 1557

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>MYH9_HUMAN (P35579) Myosin-9 (Myosin heavy chain, nonmuscle IIa) (Nonmuscle|
            myosin heavy chain IIa) (NMMHC II-a) (NMMHC-IIA)
            (Cellular myosin heavy chain, type A) (Nonmuscle myosin
            heavy chain-A) (NMMHC-A)
          Length = 1959

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 246  EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQL 416
            EM++L S +DDV + V   E+       QV+   E  ++LE+    + A   A+L+L
Sbjct: 1504 EMEDLMSSKDDVGKSVHELEKSKRALEQQVE---EMKTQLEELEDELQATEDAKLRL 1557

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>DYXC1_MOUSE (Q8R368) Dyslexia susceptibility 1 candidate gene 1 protein homolog|
          Length = 420

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = +3

Query: 234 ALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQ 413
           ALG  M   K + ++ K++ D  E +  +ATS+++ W EC  +  D   R+      R +
Sbjct: 129 ALGEMM---KIEEEERKKIEDMKENERKKATSELEAWKEC-QKKADGQKRVQ-----RKE 179

Query: 414 LPPDQ 428
            PP++
Sbjct: 180 KPPER 184

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>UVRD_MYCPN (P75437) Probable DNA helicase II homolog (EC 3.6.1.-)|
          Length = 715

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +3

Query: 135 EFVASIVDTAFRPLKDYFARTFGYVMSCGDYIDALGHEMDELKSKRDDVKRMVDTAERQG 314
           +FV + +   FR L+        + ++  D+I+ L  + DELK  +D+V  ++     +G
Sbjct: 500 QFVCNFI---FRTLQKLQTENKNFTIT--DFINELRFQQDELKQSKDNVINLITVHSAKG 554

Query: 315 LE 320
           LE
Sbjct: 555 LE 556

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>COBS_THETN (Q8RCN8) Cobalamin synthase (EC 2.-.-.-)|
          Length = 248

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
 Frame = +3

Query: 141 VASIVDTAFRPLKDYFAR--------TFGYVMSCGDYIDALGHEMDELKSKRDDVK 284
           +  I+  A+  LKD F+R         F Y+++ G +ID L    D L S +D  K
Sbjct: 44  IGGILYIAYLLLKDLFSREIVMTFLVAFSYILTRGMHIDGLADTFDGLFSNKDREK 99

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>SBCC_RHOCA (O68032) Nuclease sbcCD subunit C|
          Length = 1238

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/57 (38%), Positives = 27/57 (47%)
 Frame = +3

Query: 285  RMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQLPPDQAPGLRATYR 455
            R  +TA      AT+Q     +  + LE AAA   AE  A + LPP  A  LRA  R
Sbjct: 930  RAAETARAASEAATAQRAAEADLAAALE-AAAMSAAELAALIALPPGTAERLRADLR 985

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>EPHB3_CHICK (Q07498) Ephrin type-B receptor 3 (EC 2.7.10.1) (Tyrosine-protein|
            kinase receptor CEK10) (Fragment)
          Length = 988

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 105  DRGIRLAAAMEFVASIVDTAFRPLKDYFARTFGYVMSCGDYIDAL 239
            D+ IR AA+++ +AS+     +PL D     +    + GD++DA+
Sbjct: 883  DKLIRNAASLKVIASVQSGVSQPLLDRTVPDYTTFTTVGDWLDAI 927

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>MYSP_SARSC (Q9BMM8) Paramyosin|
          Length = 876

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +3

Query: 228 IDALGHEMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQAR 407
           +  L HE ++L+ +RD + R          E         EC S+L DA  RIH E +  
Sbjct: 405 LQKLQHEYEKLRDQRDALAR----------ENKKLTDDLAECKSQLNDAHRRIH-EQEIE 453

Query: 408 LQLPPDQAPGLRATYR 455
           ++   ++   L A Y+
Sbjct: 454 IKRLENEREELSAAYK 469

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>MYH11_CHICK (P10587) Myosin-11 (Myosin heavy chain, gizzard smooth muscle)|
          Length = 1978

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = +3

Query: 246  EMDELKSKRDDVKRMVDTAERQGLEATSQVKRWLECVSRLEDAAARIHAEYQARLQL 416
            EM++L S +DDV + V   E+       QV+   E  ++LE+    + A   A+L+L
Sbjct: 1517 EMEDLVSSKDDVGKNVHELEKSKRTLEQQVE---EMKTQLEELEDELQAAEDAKLRL 1570


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.126    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,461,883
Number of Sequences: 219361
Number of extensions: 743065
Number of successful extensions: 3355
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 3267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3353
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result