>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04,
             complete sequence
          Length = 95383

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                         
Query: 290   atggaaagtcttacaagagtagaactcgaccttgcatttgcttctgagaaattgctaaat 349
             ||||||| | |||| ||||| ||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 66191 atggaaattattactagagtggaacttgagcttgcatttgcctctgagaaattactaaat 66132

                                                                         
Query: 350   ttggagatgctggtgatggaaatagctcgccgagctactgattttgagcctcttaccttg 409
              | |||||| |||||||||| |||||||||   ||||||||||||||||||| ||| |||
Sbjct: 66131 ctagagatgttggtgatggagatagctcgcaaggctactgattttgagcctcctacattg 66072

                                                                         
Query: 410   gatagtgaatctgtttcttctgagactgctgagaatgccttcgagctggacaccttgtat 469
             ||    ||||||||||||||||| ||||| |||| ||| || ||  |||||| | | |||
Sbjct: 66071 gaagacgaatctgtttcttctgaaactgccgagagtgcttttgaattggacatcctatat 66012

                                                         
Query: 470   ggtattctcgatgcagaagtccaggagttggatgacatgatcag 513
             ||| |||| |||||||||||   |||||| ||||||||||||||
Sbjct: 66011 ggttttctagatgcagaagtaggggagttagatgacatgatcag 65968

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Minus

                                                                           
Query: 290     atggaaagtcttacaagagtagaactcgaccttgcatttgcttctgagaaattgctaaat 349
               ||||||| | |||| ||||| ||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 8487921 atggaaattattactagagtggaacttgagcttgcatttgcctctgagaaattactaaat 8487862

                                                                           
Query: 350     ttggagatgctggtgatggaaatagctcgccgagctactgattttgagcctcttaccttg 409
                | |||||| |||||||||| |||||||||   ||||||||||||||||||| ||| |||
Sbjct: 8487861 ctagagatgttggtgatggagatagctcgcaaggctactgattttgagcctcctacattg 8487802

                                                                           
Query: 410     gatagtgaatctgtttcttctgagactgctgagaatgccttcgagctggacaccttgtat 469
               ||    ||||||||||||||||| ||||| |||| ||| || ||  |||||| | | |||
Sbjct: 8487801 gaagacgaatctgtttcttctgaaactgccgagagtgcttttgaattggacatcctatat 8487742

                                                           
Query: 470     ggtattctcgatgcagaagtccaggagttggatgacatgatcag 513
               ||| |||| |||||||||||   |||||| ||||||||||||||
Sbjct: 8487741 ggttttctagatgcagaagtaggggagttagatgacatgatcag 8487698

>dbj|AK068369.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N06, full
           insert sequence
          Length = 2457

 Score =  151 bits (76), Expect = 3e-33
 Identities = 187/224 (83%)
 Strand = Plus / Plus

                                                                       
Query: 290 atggaaagtcttacaagagtagaactcgaccttgcatttgcttctgagaaattgctaaat 349
           ||||||| | |||| ||||| ||||| || ||||||||||| ||||||||||| ||||||
Sbjct: 231 atggaaattattactagagtggaacttgagcttgcatttgcctctgagaaattactaaat 290

                                                                       
Query: 350 ttggagatgctggtgatggaaatagctcgccgagctactgattttgagcctcttaccttg 409
            | |||||| |||||||||| |||||||||   ||||||||||||||||||| ||| |||
Sbjct: 291 ctagagatgttggtgatggagatagctcgcaaggctactgattttgagcctcctacattg 350

                                                                       
Query: 410 gatagtgaatctgtttcttctgagactgctgagaatgccttcgagctggacaccttgtat 469
           ||    ||||||||||||||||| ||||| |||| ||| || ||  |||||| | | |||
Sbjct: 351 gaagacgaatctgtttcttctgaaactgccgagagtgcttttgaattggacatcctatat 410

                                                       
Query: 470 ggtattctcgatgcagaagtccaggagttggatgacatgatcag 513
           ||| |||| |||||||||||   |||||| ||||||||||||||
Sbjct: 411 ggttttctagatgcagaagtaggggagttagatgacatgatcag 454

>gb|AC092665.3| Homo sapiens BAC clone RP11-544B5 from 4, complete sequence
          Length = 138504

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 154    cccacctccccttcagccggct 175
              ||||||||||||||||||||||
Sbjct: 122846 cccacctccccttcagccggct 122825

>gb|AY596295.1| Haloarcula marismortui ATCC 43049 plasmid pNG600, complete sequence
          Length = 155300

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 422  gtttcttctgagactgctgag 442
            |||||||||||||||||||||
Sbjct: 7049 gtttcttctgagactgctgag 7069

>gb|AY813191.1| Schistosoma japonicum SJCHGC02862 protein mRNA, complete cds
          Length = 1658

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 124 ctggagcaagcagcacaggtc 144
           |||||||||||||||||||||
Sbjct: 82  ctggagcaagcagcacaggtc 62

>ref|NM_188660.1| Oryza sativa (japonica cultivar-group), Ozsa8263 predicted mRNA
          Length = 2289

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 342 tgctaaatttggagatgctggtgatgga 369
           |||| ||||||||||||||| |||||||
Sbjct: 440 tgctgaatttggagatgctgctgatgga 467

>ref|XM_591173.2| PREDICTED: Bos taurus similar to RAD52B (LOC513486), mRNA
          Length = 1148

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 481 tgcagaagtccaggagttgg 500
           ||||||||||||||||||||
Sbjct: 517 tgcagaagtccaggagttgg 536

>ref|XM_420938.1| PREDICTED: Gallus gallus similar to AF15q14 protein isoform 2
            (LOC423007), mRNA
          Length = 6222

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 418  atctgtttcttctgagactg 437
            ||||||||||||||||||||
Sbjct: 1293 atctgtttcttctgagactg 1312

>gb|BC070856.1| Xenopus laevis hypothetical protein MGC84607, mRNA (cDNA clone
            MGC:84607 IMAGE:6640931), complete cds
          Length = 4644

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  aaatgccctgcctcctggag 263
            ||||||||||||||||||||
Sbjct: 3772 aaatgccctgcctcctggag 3753

>ref|XM_388692.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08516.1)
            partial mRNA
          Length = 1983

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 427  ttctgagactgctgagaatg 446
            ||||||||||||||||||||
Sbjct: 1854 ttctgagactgctgagaatg 1873

>gb|AC073927.9| Homo sapiens BAC clone RP11-604B16 from 7, complete sequence
          Length = 185676

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 418  atctgtttcttctgagactgctgagaat 445
            |||| ||||||||||||| |||||||||
Sbjct: 1998 atctttttcttctgagaccgctgagaat 2025

>emb|AM040048.1| Sus scrofa partial CKM gene for muscle creatine kinase, exons 6-8
          Length = 1548

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ccccacctccccttcagccg 172
           ||||||||||||||||||||
Sbjct: 706 ccccacctccccttcagccg 687

>gb|DQ153192.1| Sus scrofa CKM gene, promoter region and complete cds
          Length = 12338

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   ccccacctccccttcagccg 172
             ||||||||||||||||||||
Sbjct: 11256 ccccacctccccttcagccg 11237

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 74      cagatcgtggtgctccggcg 93
               ||||||||||||||||||||
Sbjct: 4566808 cagatcgtggtgctccggcg 4566789

>emb|AL133230.25| Human DNA sequence from clone RP4-530I15 on chromosome 20 Contains the
             3' end of the PTPN1 gene for protein tyrosine phosphatase,
             non-receptor type 1 (EC 3.1.3.48), the C20orf175 gene for
             a novel protein similar to DIFF48, the RPL36P2 gene for
             ribosomal protein L36 pseudogene 2 and three novel genes,
             complete sequence
          Length = 111039

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   atctgtttcttctgagactg 437
             ||||||||||||||||||||
Sbjct: 41168 atctgtttcttctgagactg 41149

>emb|BX883044.1| Rattus norvegicus chromosome 20, major histocompatibility complex,
              assembled from 40 BACs, strain Brown Norway (BN/ssNHsd),
              RT1n haplotype; segment 3/11
          Length = 340493

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tccccacctccccttcagcc 171
              ||||||||||||||||||||
Sbjct: 202673 tccccacctccccttcagcc 202654

>emb|BX005316.8| Zebrafish DNA sequence from clone CH211-287H3, complete sequence
          Length = 154329

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    caggaagcagcggccgagca 117
             ||||||||||||||||||||
Sbjct: 24821 caggaagcagcggccgagca 24840

>gb|AC160139.2| Mus musculus BAC clone RP23-93P8 from chromosome 9, complete sequence
          Length = 208009

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 388   tgattttgagcctcttacct 407
             ||||||||||||||||||||
Sbjct: 82673 tgattttgagcctcttacct 82654

>ref|XM_689452.1| PREDICTED: Danio rerio hypothetical protein LOC566176 (LOC566176),
           partial mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 98  caggaagcagcggccgagca 117
           ||||||||||||||||||||
Sbjct: 525 caggaagcagcggccgagca 506

>emb|CR353181.1| Gallus gallus finished cDNA, clone ChEST441h23
          Length = 825

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 114 agcagctcagctggagcaag 133
           ||||||||||||||||||||
Sbjct: 587 agcagctcagctggagcaag 568

>emb|BX511202.3|RN217N9 Rattus norvegicus chromosome 1 BAC RP32-217N9, complete sequence
          Length = 178012

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    ttggagatgctggtgatgga 369
              ||||||||||||||||||||
Sbjct: 144830 ttggagatgctggtgatgga 144811

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 342     tgctaaatttggagatgctggtgatgga 369
               |||| ||||||||||||||| |||||||
Sbjct: 7475261 tgctgaatttggagatgctgctgatgga 7475234

>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0702F03
          Length = 141111

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 342    tgctaaatttggagatgctggtgatgga 369
              |||| ||||||||||||||| |||||||
Sbjct: 136289 tgctgaatttggagatgctgctgatgga 136262

>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 342   tgctaaatttggagatgctggtgatgga 369
             |||| ||||||||||||||| |||||||
Sbjct: 24053 tgctgaatttggagatgctgctgatgga 24026

>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome
          Length = 1358633

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 424    ttcttctgagactgctgagaatgc 447
              |||||||||||||||||| |||||
Sbjct: 853363 ttcttctgagactgctgataatgc 853340

>emb|AL929392.11| Zebrafish DNA sequence from clone CH211-79L17, complete sequence
          Length = 172427

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 98   caggaagcagcggccgagca 117
            ||||||||||||||||||||
Sbjct: 5737 caggaagcagcggccgagca 5756

>emb|BX511013.9| Zebrafish DNA sequence from clone DKEY-221I2 in linkage group 20,
             complete sequence
          Length = 161346

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 218   actataaatgatgttcaagc 237
             ||||||||||||||||||||
Sbjct: 86437 actataaatgatgttcaagc 86418

>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ttctgagaaattgctaaatt 350
             ||||||||||||||||||||
Sbjct: 62433 ttctgagaaattgctaaatt 62452

>emb|BX321909.3| Mouse DNA sequence from clone RP23-443D3 on chromosome 2, complete
             sequence
          Length = 82074

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ctggagcaagcagcacaggt 143
             ||||||||||||||||||||
Sbjct: 10818 ctggagcaagcagcacaggt 10799

>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete
             sequence
          Length = 203474

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ttctgagaaattgctaaatt 350
             ||||||||||||||||||||
Sbjct: 26989 ttctgagaaattgctaaatt 27008

>emb|AL928843.9| Zebrafish DNA sequence from clone DKEY-7P8 in linkage group 7, complete
             sequence
          Length = 179577

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 220   tataaatgatgttcaagcccaagaaaat 247
             ||||| ||||||||||||| ||||||||
Sbjct: 96312 tataagtgatgttcaagcctaagaaaat 96339

>emb|AL732555.7| Mouse DNA sequence from clone RP23-124I19 on chromosome 4, complete
             sequence
          Length = 157653

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 331   ttctgagaaattgctaaatt 350
             ||||||||||||||||||||
Sbjct: 12282 ttctgagaaattgctaaatt 12263

>gb|M33685.1|HUMPPPB1A4 Human (clone lambda-16-1) non-receptor tyrosine phosphatase 1
           (PTPN1) gene, exon x+3
          Length = 732

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 atctgtttcttctgagactg 437
           ||||||||||||||||||||
Sbjct: 716 atctgtttcttctgagactg 697

>emb|AL845268.2| Mouse DNA sequence from clone RP23-69A6 on chromosome X, complete
             sequence
          Length = 106589

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ttctgagaaattgctaaatt 350
             ||||||||||||||||||||
Sbjct: 42651 ttctgagaaattgctaaatt 42670


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,673,202
Number of Sequences: 3902068
Number of extensions: 4673202
Number of successful extensions: 86641
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86486
Number of HSP's gapped (non-prelim): 152
length of query: 513
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 490
effective length of database: 17,143,297,704
effective search space: 8400215874960
effective search space used: 8400215874960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)