>RDRP_IBDVA (P12918) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein|
           VP1)
          Length = 878

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 18/66 (27%), Positives = 32/66 (48%)
 Frame = +3

Query: 267 DLGFTSFNQVTYSHMMEWLVGLGVEMERTDMSLSVSTQSDGAGGGCEWGNSNGISSLLAQ 446
           D G   FNQ   S  M     L V+     M+L + +   G+G    + N++ +S+L+  
Sbjct: 442 DNGDPMFNQTWASFAMNIAPALVVDSSCLIMNLQIKSYGQGSGNAATFINNHLLSTLVLD 501

Query: 447 KANILK 464
           + N++K
Sbjct: 502 QWNLMK 507

>RDRP_IBDV (Q9Q6Q5) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein|
           VP1)
          Length = 881

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +3

Query: 267 DLGFTSFNQVTYSHMMEWLVGLGVEMERTDMSLSVSTQSDGAGGGCEWGNSNGISSLLAQ 446
           D G   FNQ   +  M     L V+     M+L + T   G+G    + N++ +S+L+  
Sbjct: 443 DNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKTYGQGSGNAATFINNHLLSTLVLD 502

Query: 447 KANILK 464
           + N+++
Sbjct: 503 QWNLMR 508

>RDRP_IBDV5 (P31817) RNA-directed RNA polymerase (EC 2.7.7.48) (RDRP) (Protein|
           VP1) (Fragment)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +3

Query: 267 DLGFTSFNQVTYSHMMEWLVGLGVEMERTDMSLSVSTQSDGAGGGCEWGNSNGISSLLAQ 446
           D G   FNQ   +  M     L V+     M+L + T   G+G    + N++ +S+L+  
Sbjct: 117 DNGDPMFNQTWATFAMNIAPALVVDSSCLIMNLQIKTYGQGSGNAATFINNHLLSTLVLD 176

Query: 447 KANILK 464
           + N+++
Sbjct: 177 QWNLMR 182

>FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5|
          Length = 1219

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +2

Query: 284 LQPGNIFPHDGMVSRARGGDGENRHVFISEYTI 382
           LQPG  F  +G + R RG     RH+F+   T+
Sbjct: 864 LQPGREFLKEGTLMRVRGKSRHPRHLFLMNDTL 896


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,921,483
Number of Sequences: 219361
Number of extensions: 1023995
Number of successful extensions: 3164
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3163
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)