Clone Name | bastl04c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SET2_CAEEL (Q18221) Protein set-2 | 28 | 6.7 | 2 | GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 pro... | 28 | 8.8 | 3 | CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (... | 28 | 8.8 |
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>SET2_CAEEL (Q18221) Protein set-2| Length = 1507 Score = 28.5 bits (62), Expect = 6.7 Identities = 11/24 (45%), Positives = 17/24 (70%) Frame = +3 Query: 15 PSRGHPSNPLRTPPEHHRPEENPS 86 P +GHPS L+TP +H +P+ P+ Sbjct: 558 PPKGHPSVHLQTPYQHVQPQMIPA 581
>GROU_DROME (P16371) Protein groucho (Enhancer of split m9/10 protein)| (E(spl)m9/10) Length = 719 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +3 Query: 30 PSNPLRTPPEHHRPEENPS 86 P L PPEHHRP+ P+ Sbjct: 161 PQGLLNKPPEHHRPDIKPT 179
>CBPY_SCHPO (O13849) Carboxypeptidase Y precursor (EC 3.4.16.5) (CPY)| Length = 1002 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = +3 Query: 12 FPSRGHPSNPLRTPPEHHRPEENPSP 89 FP+ P + PP HH+P E+ P Sbjct: 197 FPAHHEPGEHMPPPPMHHKPGEHMPP 222 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,072,296 Number of Sequences: 219361 Number of extensions: 646473 Number of successful extensions: 2661 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2561 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2659 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)