>JDP_BOMMO (Q9U6V7) J domain-containing protein|
          Length = 170

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 4   RLIKASRKLPTPPSNLGSARPARNKHRAGGRRSWER 111
           R+++     P+ PS+LG + PA  +   GG   W R
Sbjct: 114 RMLEGDGSKPSGPSSLGPSNPATRRASEGGAALWGR 149

>AMID_PSECL (P27765) Amidase (EC 3.5.1.4)|
          Length = 505

 Score = 28.9 bits (63), Expect = 4.0
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
 Frame = +1

Query: 43  SNLGSARPARNKHR----AGGRRSWERAMAAKGTTEMEVGGD 156
           S+     P  N HR    +GG  S   A+ A G  ++ VGGD
Sbjct: 151 SHTSDPAPVHNPHRHGYASGGSSSGSAALVASGEVDIAVGGD 192

>KLF2_RAT (Q9ET58) Krueppel-like factor 2 (Lung krueppel-like factor)|
          Length = 351

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  ASRKLPTPPSN---LGSARPARNKHRAGGRRSWERAMAAKGT 132
           A+R L TPPS+   L  A+P R      GRRSW R  AA  T
Sbjct: 234 ATRGLLTPPSSPLELLEAKPKR------GRRSWPRKRAATHT 269

>KLF2_MOUSE (Q60843) Krueppel-like factor 2 (Lung krueppel-like factor)|
          Length = 354

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
 Frame = +1

Query: 16  ASRKLPTPPSN---LGSARPARNKHRAGGRRSWERAMAAKGT 132
           A+R L TPPS+   L  A+P R      GRRSW R  AA  T
Sbjct: 237 ATRGLLTPPSSPLELLEAKPKR------GRRSWPRKRAATHT 272

>ACOX_RALEU (P27748) Acetoin catabolism protein X|
          Length = 359

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -2

Query: 143 SISVVPLAAIARSQDRLPPARCLFLAGLAEPRLLGGVGSLR 21
           ++  + +   AR  D L  ARC+  AG+A   +LGG G+ R
Sbjct: 90  AVDYLDMPVTARVDDTLRAARCMADAGVAAIIVLGGDGTHR 130

>REV_HV2SB (P12448) REV protein (Anti-repression transactivator protein)|
           (ART/TRS)
          Length = 168

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 4   RLIKASRKLPTPPSNLGSARPARNKHRAGGRRSWERAMA 120
           RLI+   +    P  LG+AR  RN+ R   RR W++ +A
Sbjct: 15  RLIRLLHQTNPYPQGLGTARQRRNRRRRWERR-WKQILA 52


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.127    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,622,249
Number of Sequences: 219361
Number of extensions: 299694
Number of successful extensions: 882
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 882
length of database: 80,573,946
effective HSP length: 27
effective length of database: 74,651,199
effective search space used: 1791628776
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)