ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467437.1| Oryza sativa (japonica cultivar-group), mRNA 250 1e-63
2dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 1e-63
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 214 6e-53
4dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 214 6e-53
5dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 50 0.002
6gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene... 50 0.002
7gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete s... 48 0.009
8gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete seq... 48 0.009
9emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complet... 48 0.009
10emb|X04650.1|HEHCMVU Human cytomegalovirus (HCMV) short unique r... 48 0.009
11emb|AJ130842.1|OMY130842 Oncorhynchus mykiss mRNA for sodium-cal... 48 0.009
12gb|M13883.1|HS5LSJ Human cytomegalovirus (HCMV) DNA, L-S junction 48 0.009
13gb|K02988.1|HS5LSA Human cytomegalovirus (AD169) L-S junction re... 48 0.009
14gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 46 0.034
15ref|XM_499787.1| Yarrowia lipolytica CLIB122, YALI0A05533g predi... 44 0.14
16gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.14
17emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 44 0.14
18gb|AF389112.1|AF389112 Rhizobium sp. NGR234, cosmid pXB9, comple... 42 0.53
19gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 0.53
20gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.1
21emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 2.1
22emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 2.1
23emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A stra... 40 2.1
24gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 2.1
25gb|AE006030.1| Caulobacter crescentus CB15 section 356 of 359 of... 40 2.1
26gb|AE005728.1| Caulobacter crescentus CB15 section 54 of 359 of ... 40 2.1
27gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 2.1
28gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 2.1
29gb|AE002098.2| Neisseria meningitidis MC58, complete genome 40 2.1
30dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.1
31dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 2.1
32gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 40 2.1
33ref|XM_550471.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.3
34ref|XM_467234.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.3
35gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 8.3
36gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 38 8.3
37gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 38 8.3
38gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 38 8.3
39gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 38 8.3
40gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 8.3
41emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 38 8.3
42gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, com... 38 8.3
43gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 38 8.3
44gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 38 8.3
45gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 8.3
46gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 38 8.3
47gb|CP000088.1| Thermobifida fusca YX, complete genome 38 8.3
48emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 38 8.3
49emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 38 8.3
50emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 38 8.3
51emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A stra... 38 8.3
52gb|AE011983.1| Xanthomonas axonopodis pv. citri str. 306, secti... 38 8.3
53dbj|AB218895.1| Oryza sativa (japonica cultivar-group) mRNA for ... 38 8.3
54gb|CP000249.1| Frankia sp. CcI3, complete genome 38 8.3
55gb|AF319993.1|AF319993 Oryzias latipes strain Kaga DMRT3 gene, p... 38 8.3
56gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 8.3
57gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 38 8.3
58dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
59dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
60dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
61gb|AY613944.1| Xanthomonas axonopodis pv. vesicatoria FhuE gene,... 38 8.3
62gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 8.3
63dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 8.3
64dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
65dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
66dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
67dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
68dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
69dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.3
70dbj|AK101521.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.3
71dbj|AK101029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 8.3
72emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right termin... 38 8.3
73emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left termina... 38 8.3
74gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 8.3
75gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 38 8.3
76gb|U47864.1|MBU47864 Mycobacterium bovis 36-bp direct repeat region 38 8.3 
>ref|XM_467437.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3793

 Score =  250 bits (126), Expect = 1e-63
 Identities = 159/170 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcccgccgtcgccgtcctccgcaccaccgcgccgcgcgccttcgacaccgaggtcgccg 60
           ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 340 tgccctccgtcgtcgtcctccgcaccaccgcgccgcgggccttcgacaccgaggtcgccg 399

                                                                       
Query: 61  gcgccagctacgccaccggcttcgtcgtcgacaaggcccgcggcatcatcctcaccaacc 120
           ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 400 gcgccagctacgccaccggcttcgtcgtcgacaagtccaggggcatcatcctcaccaacc 459

                                                             
Query: 121 gccacgtcgtcaagcccggtcctgtggtctcggaggcgatgttcgtgaac 170
           | |||||||||||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 460 gacacgtcgtcaagccagggcctgtcgtcgcggaggcgatgttcgtgaac 509
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>dbj|AK065045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001I02, full
           insert sequence
          Length = 3793

 Score =  250 bits (126), Expect = 1e-63
 Identities = 159/170 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcccgccgtcgccgtcctccgcaccaccgcgccgcgcgccttcgacaccgaggtcgccg 60
           ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 340 tgccctccgtcgtcgtcctccgcaccaccgcgccgcgggccttcgacaccgaggtcgccg 399

                                                                       
Query: 61  gcgccagctacgccaccggcttcgtcgtcgacaaggcccgcggcatcatcctcaccaacc 120
           ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 400 gcgccagctacgccaccggcttcgtcgtcgacaagtccaggggcatcatcctcaccaacc 459

                                                             
Query: 121 gccacgtcgtcaagcccggtcctgtggtctcggaggcgatgttcgtgaac 170
           | |||||||||||||| || ||||| ||| ||||||||||||||||||||
Sbjct: 460 gacacgtcgtcaagccagggcctgtcgtcgcggaggcgatgttcgtgaac 509
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  214 bits (108), Expect = 6e-53
 Identities = 129/136 (94%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgcccgccgtcgccgtcctccgcaccaccgcgccgcgcgccttcgacaccgaggtcgccg 60
                ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 29513857 tgccctccgtcgtcgtcctccgcaccaccgcgccgcgggccttcgacaccgaggtcgccg 29513798

                                                                            
Query: 61       gcgccagctacgccaccggcttcgtcgtcgacaaggcccgcggcatcatcctcaccaacc 120
                ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 29513797 gcgccagctacgccaccggcttcgtcgtcgacaagtccaggggcatcatcctcaccaacc 29513738

                                
Query: 121      gccacgtcgtcaagcc 136
                | ||||||||||||||
Sbjct: 29513737 gacacgtcgtcaagcc 29513722



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 141      cctgtggtctcggaggcgatgttcgtgaac 170
                ||||| ||| ||||||||||||||||||||
Sbjct: 29513610 cctgtcgtcgcggaggcgatgttcgtgaac 29513581



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 3        cccgccgtcgccgtcctccgcac 25
                |||||||||||||||| ||||||
Sbjct: 34097700 cccgccgtcgccgtccgccgcac 34097722



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 18       ctccgcaccaccgcgccgc 36
                |||||||||||||||||||
Sbjct: 28364673 ctccgcaccaccgcgccgc 28364691
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>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1038_A06
          Length = 147836

 Score =  214 bits (108), Expect = 6e-53
 Identities = 129/136 (94%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgcccgccgtcgccgtcctccgcaccaccgcgccgcgcgccttcgacaccgaggtcgccg 60
              ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 108887 tgccctccgtcgtcgtcctccgcaccaccgcgccgcgggccttcgacaccgaggtcgccg 108828

                                                                          
Query: 61     gcgccagctacgccaccggcttcgtcgtcgacaaggcccgcggcatcatcctcaccaacc 120
              ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct: 108827 gcgccagctacgccaccggcttcgtcgtcgacaagtccaggggcatcatcctcaccaacc 108768

                              
Query: 121    gccacgtcgtcaagcc 136
              | ||||||||||||||
Sbjct: 108767 gacacgtcgtcaagcc 108752



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 141    cctgtggtctcggaggcgatgttcgtgaac 170
              ||||| ||| ||||||||||||||||||||
Sbjct: 108640 cctgtcgtcgcggaggcgatgttcgtgaac 108611
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 35      gcgcgccttcgacaccgaggtcgccggcg 63
               |||||||||||||||||| ||||||||||
Sbjct: 1310778 gcgcgccttcgacaccgaagtcgccggcg 1310806



 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 27      accgcgccgcgcgccttcgacaccga 52
               |||||||||| |||||||||||||||
Sbjct: 3633469 accgcgccgcacgccttcgacaccga 3633494
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>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds
          Length = 13081

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                         
Query: 4    ccgccgtcgccgtcctccgcaccaccgcg 32
            ||||||||||||||| |||||||||||||
Sbjct: 5595 ccgccgtcgccgtcccccgcaccaccgcg 5623
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>gb|AC146999.1| Human Herpesvirus 5 AD169-BAC isolate, complete sequence
          Length = 233739

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 5      cgccgtcgccgtcctccgcaccac 28
              ||||||||||||||||||||||||
Sbjct: 222247 cgccgtcgccgtcctccgcaccac 222270



 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 5     cgccgtcgccgtcctccgcaccac 28
             ||||||||||||||||||||||||
Sbjct: 30823 cgccgtcgccgtcctccgcaccac 30800
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>gb|AC146907.1| Human Herpesvirus 5 FIX-BAC isolate, complete sequence
          Length = 229209

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 5      cgccgtcgccgtcctccgcaccac 28
              ||||||||||||||||||||||||
Sbjct: 227880 cgccgtcgccgtcctccgcaccac 227903



 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 5     cgccgtcgccgtcctccgcaccac 28
             ||||||||||||||||||||||||
Sbjct: 32865 cgccgtcgccgtcctccgcaccac 32842
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>emb|X17403.1|HEHCMVCG Human cytomegalovirus strain AD169 complete genome
          Length = 229354

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 5      cgccgtcgccgtcctccgcaccac 28
              ||||||||||||||||||||||||
Sbjct: 228892 cgccgtcgccgtcctccgcaccac 228869



 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 5      cgccgtcgccgtcctccgcaccac 28
              ||||||||||||||||||||||||
Sbjct: 189351 cgccgtcgccgtcctccgcaccac 189374



 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 5   cgccgtcgccgtcctccgcaccac 28
           ||||||||||||||||||||||||
Sbjct: 116 cgccgtcgccgtcctccgcaccac 93
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>emb|X04650.1|HEHCMVU Human cytomegalovirus (HCMV) short unique region, short repeats, and
            part of long repeat
          Length = 43275

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 5    cgccgtcgccgtcctccgcaccac 28
            ||||||||||||||||||||||||
Sbjct: 3857 cgccgtcgccgtcctccgcaccac 3880
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>emb|AJ130842.1|OMY130842 Oncorhynchus mykiss mRNA for sodium-calcium exchanger I, partial
          Length = 802

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 87  gtcgacaaggcccgcggcatcatc 110
           ||||||||||||||||||||||||
Sbjct: 506 gtcgacaaggcccgcggcatcatc 529
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>gb|M13883.1|HS5LSJ Human cytomegalovirus (HCMV) DNA, L-S junction
          Length = 872

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 5   cgccgtcgccgtcctccgcaccac 28
           ||||||||||||||||||||||||
Sbjct: 619 cgccgtcgccgtcctccgcaccac 642
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>gb|K02988.1|HS5LSA Human cytomegalovirus (AD169) L-S junction region
          Length = 2538

 Score = 48.1 bits (24), Expect = 0.009
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 5    cgccgtcgccgtcctccgcaccac 28
            ||||||||||||||||||||||||
Sbjct: 2237 cgccgtcgccgtcctccgcaccac 2260
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 46.1 bits (23), Expect = 0.034
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 74      caccggcttcgtcgtcgacaaggcccg 100
               ||||||||||||| |||||||||||||
Sbjct: 2290926 caccggcttcgtcatcgacaaggcccg 2290952
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>ref|XM_499787.1| Yarrowia lipolytica CLIB122, YALI0A05533g predicted mRNA
          Length = 3039

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 102 ggcatcatcctcaccaaccgccacgt 127
           ||||||||| ||||||||||||||||
Sbjct: 277 ggcatcatcgtcaccaaccgccacgt 302
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 71      cgccaccggcttcgtcgtcgac 92
               ||||||||||||||||||||||
Sbjct: 2965880 cgccaccggcttcgtcgtcgac 2965901
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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 44.1 bits (22), Expect = 0.14
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 102    ggcatcatcctcaccaaccgccacgt 127
              ||||||||| ||||||||||||||||
Sbjct: 566115 ggcatcatcgtcaccaaccgccacgt 566140
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>gb|AF389112.1|AF389112 Rhizobium sp. NGR234, cosmid pXB9, complete sequence
          Length = 35540

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 35    gcgcgccttcgacaccgaggtcgccggcg 63
             |||||||||||| ||||| ||||||||||
Sbjct: 34343 gcgcgccttcgagaccgaagtcgccggcg 34371
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 0.53
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 90     gacaaggcccgcggcatcatc 110
              |||||||||||||||||||||
Sbjct: 832127 gacaaggcccgcggcatcatc 832107



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      caccaccgcgccgcgcgcc 41
               |||||||||||||||||||
Sbjct: 4415347 caccaccgcgccgcgcgcc 4415329



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      caccaccgcgccgcgcgcc 41
               |||||||||||||||||||
Sbjct: 3118473 caccaccgcgccgcgcgcc 3118455



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 47      caccgaggtcgccggcgcc 65
               |||||||||||||||||||
Sbjct: 2077215 caccgaggtcgccggcgcc 2077233



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      ttcgacaccgaggtcgccg 60
               |||||||||||||||||||
Sbjct: 1398199 ttcgacaccgaggtcgccg 1398181
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>gb|AC120989.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0032D15,
              complete sequence
          Length = 161968

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 25     ccaccgcgccgcgcgccttc 44
              ||||||||||||||||||||
Sbjct: 119423 ccaccgcgccgcgcgccttc 119404
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 5       cgccgtcgccgtcctccgca 24
               ||||||||||||||||||||
Sbjct: 1228624 cgccgtcgccgtcctccgca 1228643
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     cgccaccggcttcgtcgtcg 90
              ||||||||||||||||||||
Sbjct: 233017 cgccaccggcttcgtcgtcg 232998
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>emb|AL162756.2|NMA5Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome;
             segment 5/7
          Length = 329861

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tgcccgccgtcgccgtcctc 20
             ||||||||||||||||||||
Sbjct: 96489 tgcccgccgtcgccgtcctc 96508
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 34     cgcgcgccttcgacaccgaggtcg 57
              ||||||||||||||||| ||||||
Sbjct: 239607 cgcgcgccttcgacacccaggtcg 239630
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>gb|AE006030.1| Caulobacter crescentus CB15 section 356 of 359 of the complete
           genome
          Length = 11452

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  gcccgcggcatcatcctcaccaac 119
           ||||||||||||||| ||||||||
Sbjct: 957 gcccgcggcatcatcgtcaccaac 980
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>gb|AE005728.1| Caulobacter crescentus CB15 section 54 of 359 of the complete genome
          Length = 12027

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  tcaccaaccgccacgtcgtcaagc 135
            |||||||||||||||||| |||||
Sbjct: 1683 tcaccaaccgccacgtcgccaagc 1660
to top
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 5       cgccgtcgccgtcctccgca 24
               ||||||||||||||||||||
Sbjct: 1182430 cgccgtcgccgtcctccgca 1182449
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     cggcttcgtcgtcgacaagg 96
              ||||||||||||||||||||
Sbjct: 661186 cggcttcgtcgtcgacaagg 661205
to top
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 1       tgcccgccgtcgccgtcctc 20
               ||||||||||||||||||||
Sbjct: 1337783 tgcccgccgtcgccgtcctc 1337802



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    cggcatcatcctcaccaac 119
              |||||||||||||||||||
Sbjct: 901265 cggcatcatcctcaccaac 901247
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 25      ccaccgcgccgcgcgccttc 44
               ||||||||||||||||||||
Sbjct: 9009053 ccaccgcgccgcgcgccttc 9009034
to top
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 107     catcctcaccaaccgccacgtcgt 130
               ||||||||||||| ||||||||||
Sbjct: 2258913 catcctcaccaacagccacgtcgt 2258936
to top
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 40.1 bits (20), Expect = 2.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      tgcccgccgtcgccgtcctc 20
              ||||||||||||||||||||
Sbjct: 571514 tgcccgccgtcgccgtcctc 571495



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 101    cggcatcatcctcaccaac 119
              |||||||||||||||||||
Sbjct: 441565 cggcatcatcctcaccaac 441547
to top
>ref|XM_550471.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2113

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    cgccgtcgccgtcctccgc 23
            |||||||||||||||||||
Sbjct: 1059 cgccgtcgccgtcctccgc 1077
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>ref|XM_467234.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2773

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  ctccgcaccaccgcgccgc 36
           |||||||||||||||||||
Sbjct: 201 ctccgcaccaccgcgccgc 219
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 29      cgcgccgcgcgccttcgac 47
               |||||||||||||||||||
Sbjct: 1527921 cgcgccgcgcgccttcgac 1527903
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 23      caccaccgcgccgcgcgcc 41
               |||||||||||||||||||
Sbjct: 5193567 caccaccgcgccgcgcgcc 5193549
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 27      accgcgccgcgcgccttcg 45
               |||||||||||||||||||
Sbjct: 2856500 accgcgccgcgcgccttcg 2856518
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 26      caccgcgccgcgcgccttc 44
               |||||||||||||||||||
Sbjct: 4448390 caccgcgccgcgcgccttc 4448408
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 35      gcgcgccttcgacaccgaggtcg 57
               |||||||||||||||||| ||||
Sbjct: 1507225 gcgcgccttcgacaccgatgtcg 1507247



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     cggcttcgtcgtcgacaag 95
              |||||||||||||||||||
Sbjct: 488378 cggcttcgtcgtcgacaag 488396



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 35     gcgcgccttcgacaccgaggtcg 57
              |||||||||||||||||| ||||
Sbjct: 460303 gcgcgccttcgacaccgatgtcg 460281
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 35      gcgcgccttcgacaccgaggtcg 57
               |||||||||||||||||| ||||
Sbjct: 3262231 gcgcgccttcgacaccgatgtcg 3262209
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 53      ggtcgccggcgccagctac 71
               |||||||||||||||||||
Sbjct: 3994341 ggtcgccggcgccagctac 3994323
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>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence
          Length = 210205

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 47     caccgaggtcgccggcgcc 65
              |||||||||||||||||||
Sbjct: 195782 caccgaggtcgccggcgcc 195764
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 21      cgcaccaccgcgccgcgcg 39
               |||||||||||||||||||
Sbjct: 2148741 cgcaccaccgcgccgcgcg 2148723
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 74      caccggcttcgtcgtcgac 92
               |||||||||||||||||||
Sbjct: 2878675 caccggcttcgtcgtcgac 2878693
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     cgccggcgccagctacgcc 74
              |||||||||||||||||||
Sbjct: 479478 cgccggcgccagctacgcc 479460
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 76     ccggcttcgtcgtcgacaaggcc 98
              ||||||||| |||||||||||||
Sbjct: 550956 ccggcttcgccgtcgacaaggcc 550934
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      ttcgacaccgaggtcgccg 60
               |||||||||||||||||||
Sbjct: 1374837 ttcgacaccgaggtcgccg 1374819
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 27      accgcgccgcgcgccttcg 45
               |||||||||||||||||||
Sbjct: 1035051 accgcgccgcgcgccttcg 1035069
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 94    aggcccgcggcatcatcctcaccaacc 120
             ||||||||||||||| ||||| |||||
Sbjct: 93296 aggcccgcggcatcaccctcaacaacc 93322
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 74     caccggcttcgtcgtcgacaagg 96
              ||||||||||||| |||||||||
Sbjct: 153103 caccggcttcgtcttcgacaagg 153125
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>emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome;
             segment 4/7
          Length = 331801

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 101   cggcatcatcctcaccaac 119
             |||||||||||||||||||
Sbjct: 46913 cggcatcatcctcaccaac 46895
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>gb|AE011983.1| Xanthomonas axonopodis pv. citri str. 306,  section 361 of 469 of the
            complete genome
          Length = 10544

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 53   ggtcgccggcgccagctac 71
            |||||||||||||||||||
Sbjct: 3879 ggtcgccggcgccagctac 3861
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>dbj|AB218895.1| Oryza sativa (japonica cultivar-group) mRNA for OsBEL protein,
           complete cds
          Length = 1590

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 5   cgccgtcgccgtcctccgc 23
           |||||||||||||||||||
Sbjct: 909 cgccgtcgccgtcctccgc 927
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 38      cgccttcgacaccgaggtc 56
               |||||||||||||||||||
Sbjct: 1492013 cgccttcgacaccgaggtc 1492031
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>gb|AF319993.1|AF319993 Oryzias latipes strain Kaga DMRT3 gene, partial cds
          Length = 1669

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 25  ccaccgcgccgcgcgccttcgac 47
           |||||||||||||||||| ||||
Sbjct: 876 ccaccgcgccgcgcgcctccgac 898
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 74      caccggcttcgtcgtcgac 92
               |||||||||||||||||||
Sbjct: 3306400 caccggcttcgtcgtcgac 3306382
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     accgcgccgcgcgccttcg 45
              |||||||||||||||||||
Sbjct: 628823 accgcgccgcgcgccttcg 628841
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 3       cccgccgtcgccgtcctccgcac 25
               |||||||||||||||| ||||||
Sbjct: 8728997 cccgccgtcgccgtccgccgcac 8728975
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                       
Query: 26       caccgcgccgcgcgccttcgaca 48
                |||||||||||||||| ||||||
Sbjct: 18517976 caccgcgccgcgcgccgtcgaca 18517954
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 5      cgccgtcgccgtcctccgc 23
              |||||||||||||||||||
Sbjct: 527809 cgccgtcgccgtcctccgc 527827
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>gb|AY613944.1| Xanthomonas axonopodis pv. vesicatoria FhuE gene, partial cds
          Length = 564

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 53  ggtcgccggcgccagctac 71
           |||||||||||||||||||
Sbjct: 417 ggtcgccggcgccagctac 435
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 20      ccgcaccaccgcgccgcgc 38
               |||||||||||||||||||
Sbjct: 3984667 ccgcaccaccgcgccgcgc 3984649



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 7       ccgtcgccgtcctccgcac 25
               |||||||||||||||||||
Sbjct: 2354522 ccgtcgccgtcctccgcac 2354540
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 71     cgccaccggcttcgtcgtcgaca 93
              ||||||||||||||||| |||||
Sbjct: 874550 cgccaccggcttcgtcgccgaca 874572
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>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0004I20
          Length = 94135

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    cgccgtcgccgtcctccgc 23
            |||||||||||||||||||
Sbjct: 4426 cgccgtcgccgtcctccgc 4444
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>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
             clone:P0514G12
          Length = 138929

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     cgccgtcgccgtcctccgc 23
             |||||||||||||||||||
Sbjct: 73317 cgccgtcgccgtcctccgc 73335
to top
>dbj|AP005802.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0057D11
          Length = 190790

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 3      cccgccgtcgccgtcctccgcac 25
              |||||||||||||||| ||||||
Sbjct: 158793 cccgccgtcgccgtccgccgcac 158771
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>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0032L17
          Length = 165808

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 3     cccgccgtcgccgtcctccgcac 25
             |||||||||||||||| ||||||
Sbjct: 25214 cccgccgtcgccgtccgccgcac 25236
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 26    caccgcgccgcgcgccttcgaca 48
             |||||||||||||||| ||||||
Sbjct: 46732 caccgcgccgcgcgccgtcgaca 46710
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>dbj|AP004096.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1743_B12
          Length = 175645

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 18     ctccgcaccaccgcgccgc 36
              |||||||||||||||||||
Sbjct: 156430 ctccgcaccaccgcgccgc 156448
to top
>dbj|AK101521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046L04, full
           insert sequence
          Length = 2772

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 18  ctccgcaccaccgcgccgc 36
           |||||||||||||||||||
Sbjct: 200 ctccgcaccaccgcgccgc 218
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>dbj|AK101029.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150H24, full
            insert sequence
          Length = 2112

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 5    cgccgtcgccgtcctccgc 23
            |||||||||||||||||||
Sbjct: 1058 cgccgtcgccgtcctccgc 1076
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>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     ccaccgcgccgcgcgcctt 43
              |||||||||||||||||||
Sbjct: 130808 ccaccgcgccgcgcgcctt 130826
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>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 25     ccaccgcgccgcgcgcctt 43
              |||||||||||||||||||
Sbjct: 130808 ccaccgcgccgcgcgcctt 130826
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 43      tcgacaccgaggtcgccgg 61
               |||||||||||||||||||
Sbjct: 4748802 tcgacaccgaggtcgccgg 4748784



 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 35      gcgcgccttcgacaccgag 53
               |||||||||||||||||||
Sbjct: 3138284 gcgcgccttcgacaccgag 3138302
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 62      cgccagctacgccaccggc 80
               |||||||||||||||||||
Sbjct: 1518890 cgccagctacgccaccggc 1518872
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>gb|U47864.1|MBU47864 Mycobacterium bovis 36-bp direct repeat region
          Length = 4452

 Score = 38.2 bits (19), Expect = 8.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 80   cttcgtcgtcgacaaggcc 98
            |||||||||||||||||||
Sbjct: 4096 cttcgtcgtcgacaaggcc 4078


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,070,201
Number of Sequences: 3902068
Number of extensions: 1070201
Number of successful extensions: 108322
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99361
Number of HSP's gapped (non-prelim): 8961
length of query: 171
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 149
effective length of database: 17,147,199,772
effective search space: 2554932766028
effective search space used: 2554932766028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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