ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04c04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549980.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
2emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowm... 50 0.007
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
4dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
5dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA f... 50 0.007
6gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhib... 50 0.007
7gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibit... 50 0.007
8dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
9gb|BC087516.1| Xenopus laevis cDNA clone IMAGE:7205404 42 1.7
10gb|BC106506.1| Xenopus laevis cDNA clone MGC:131246 IMAGE:739228... 42 1.7
11ref|XM_754747.1| Ustilago maydis 521 hypothetical protein (UM036... 42 1.7
12gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 gen... 42 1.7
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AK069913.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
15gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
16ref|NM_197493.1| Oryza sativa (japonica cultivar-group) putative... 40 6.6
17ref|XM_478001.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.6
18gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.6
19gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genom... 40 6.6
20gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 40 6.6
21gb|AF248314.1| Uncultured bacterium pCosAS1 urocanase-like prote... 40 6.6
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.6
23emb|CR710637.2|CNS0GBA1 Tetraodon nigroviridis full-length cDNA 40 6.6
24emb|CR676386.2|CNS0FKV2 Tetraodon nigroviridis full-length cDNA 40 6.6
25emb|CR648444.2|CNS0EZB6 Tetraodon nigroviridis full-length cDNA 40 6.6
26gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno... 40 6.6
27gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno... 40 6.6
28emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chr... 40 6.6
29emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative ... 40 6.6
30gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, co... 40 6.6
31dbj|AK153809.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.6
32ref|NM_026185.1| Mus musculus RIKEN cDNA 1300007F04 gene (130000... 40 6.6
33dbj|AK018696.1| Mus musculus 2 days neonate thymus thymic cells ... 40 6.6
34gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.6
35dbj|AK040037.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 6.6
36dbj|AK046590.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 6.6
37dbj|AK040172.1| Mus musculus 0 day neonate thymus cDNA, RIKEN fu... 40 6.6
38dbj|AK042032.1| Mus musculus 3 days neonate thymus cDNA, RIKEN f... 40 6.6
39dbj|AK004929.1| Mus musculus adult male liver cDNA, RIKEN full-l... 40 6.6
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
41dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.6
43dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 6.6
44dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.6
45dbj|AK107032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.6
46gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.6
47dbj|AB070936.1| Streptomyces avermitilis siderophore biosyntheti... 40 6.6 
>ref|XM_549980.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 411

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 298 ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
           |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 256 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 296
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>emb|AJ277469.1|OSA277469 Oryza sativa rbbi3-3 gene for rice Bowman Birk trypsin inhibitor
          Length = 4624

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 298  ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
            |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 3292 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 3332
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 298     ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
               |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 1353137 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 1353097
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>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0037C04
          Length = 137879

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 298   ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
             |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 51188 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 51148
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>dbj|AB098712.1| Oryza sativa (japonica cultivar-group) ti mRNA for trypsin
           inhibitor, complete cds
          Length = 1061

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 298 ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
           |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 615 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 655
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>gb|U57640.1|OSU57640 Oryza sativa Bowman-Birk type trypsin inhibitor mRNA, complete cds
          Length = 855

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 298 ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
           |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 397 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 437
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>gb|U76004.1|OSU76004 Oryza sativa Bowman-Birk proteinase inhibitor mRNA, complete cds
          Length = 1050

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 298 ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
           |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 592 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 632
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>dbj|AP002909.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0044F08
          Length = 141528

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 298  ccgccgacgtgccgatgcctggacgaggtggaggagtgcgc 338
            |||||||| ||||| ||| ||||||||||| ||||||||||
Sbjct: 2758 ccgccgacctgccgctgcatggacgaggtgaaggagtgcgc 2718
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>gb|BC087516.1| Xenopus laevis cDNA clone IMAGE:7205404
          Length = 1340

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 caacagcaccgtgtgcaccaa 290
           |||||||||||||||||||||
Sbjct: 681 caacagcaccgtgtgcaccaa 661
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>gb|BC106506.1| Xenopus laevis cDNA clone MGC:131246 IMAGE:7392287, complete cds
          Length = 1041

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 270 caacagcaccgtgtgcaccaa 290
           |||||||||||||||||||||
Sbjct: 669 caacagcaccgtgtgcaccaa 649
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>ref|XM_754747.1| Ustilago maydis 521 hypothetical protein (UM03693.1) partial mRNA
          Length = 750

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 85  gtcgccgccgatgccgtgggc 105
           |||||||||||||||||||||
Sbjct: 530 gtcgccgccgatgccgtgggc 510
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>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete
             sequence
          Length = 144191

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 236   tcctcggcgaggaggagaggc 256
             |||||||||||||||||||||
Sbjct: 63849 tcctcggcgaggaggagaggc 63869
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 236      tcctcggcgaggaggagaggc 256
                |||||||||||||||||||||
Sbjct: 21546208 tcctcggcgaggaggagaggc 21546188



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 129      cgacgccggcgaaggtctcg 148
                ||||||||||||||||||||
Sbjct: 20091253 cgacgccggcgaaggtctcg 20091234
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>dbj|AK069913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037N12, full
           insert sequence
          Length = 1082

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 236 tcctcggcgaggaggagaggc 256
           |||||||||||||||||||||
Sbjct: 54  tcctcggcgaggaggagaggc 74
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 236      tcctcggcgaggaggagaggc 256
                |||||||||||||||||||||
Sbjct: 21557871 tcctcggcgaggaggagaggc 21557851



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 129      cgacgccggcgaaggtctcg 148
                ||||||||||||||||||||
Sbjct: 20102529 cgacgccggcgaaggtctcg 20102510
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>ref|NM_197493.1| Oryza sativa (japonica cultivar-group) putative glutathione
           S-transferase (OSJNBb0038A07.27), mRNA
          Length = 708

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 cgacgccggcgaaggtctcg 148
           ||||||||||||||||||||
Sbjct: 253 cgacgccggcgaaggtctcg 234
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>ref|XM_478001.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 537

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 420 gaaggagaggccgtgggcgtgctgcaac 447
           |||| |||||||||||| ||||||||||
Sbjct: 78  gaagaagaggccgtgggagtgctgcaac 105
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     tcctggtcgccgccgatgcc 99
              ||||||||||||||||||||
Sbjct: 966553 tcctggtcgccgccgatgcc 966572
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>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete
             sequence
          Length = 112892

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   gggaggagaacgacgtcagcggcg 235
             |||||||||||||||||| |||||
Sbjct: 97130 gggaggagaacgacgtcaacggcg 97153
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>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
             sequence
          Length = 163712

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   gggaggagaacgacgtcagcggcg 235
             |||||||||||||||||| |||||
Sbjct: 19046 gggaggagaacgacgtcaacggcg 19069
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>gb|AF248314.1| Uncultured bacterium pCosAS1 urocanase-like protein (hutU) gene,
            partial cds; histidine ammonia-lyase-like protein (hutH),
            DAPA aminotransferase BioA (bioA), biotin synthase BioB
            (bioB), 7-KAPA synthetase (bioF), biotin biosynthesis
            BioC-like protein (bioC), and dethiobiotin synthase BioD
            (bioD) genes, complete cds; ABC transporter-like protein
            (elsA) gene, partial cds; and unknown gene
          Length = 8227

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   cgccgatgccgtgggcgtcg 109
            ||||||||||||||||||||
Sbjct: 5696 cgccgatgccgtgggcgtcg 5677
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 212      gggaggagaacgacgtcagcggcg 235
                |||||||||||||||||| |||||
Sbjct: 29752331 gggaggagaacgacgtcaacggcg 29752308
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>emb|CR710637.2|CNS0GBA1 Tetraodon nigroviridis full-length cDNA
          Length = 575

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 422 aggagaggccgtgggcgtgctgca 445
           ||||| ||||||||||||||||||
Sbjct: 419 aggagtggccgtgggcgtgctgca 396
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>emb|CR676386.2|CNS0FKV2 Tetraodon nigroviridis full-length cDNA
          Length = 835

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 422 aggagaggccgtgggcgtgctgca 445
           ||||| ||||||||||||||||||
Sbjct: 444 aggagtggccgtgggcgtgctgca 421
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>emb|CR648444.2|CNS0EZB6 Tetraodon nigroviridis full-length cDNA
          Length = 810

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 422 aggagaggccgtgggcgtgctgca 445
           ||||| ||||||||||||||||||
Sbjct: 451 aggagtggccgtgggcgtgctgca 428
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>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
             sequence
          Length = 148611

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   cgacgccggcgaaggtctcg 148
             ||||||||||||||||||||
Sbjct: 16937 cgacgccggcgaaggtctcg 16956
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>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
             sequence
          Length = 132900

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   cgacgccggcgaaggtctcg 148
             ||||||||||||||||||||
Sbjct: 75238 cgacgccggcgaaggtctcg 75257
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>emb|AL591136.20| Mouse DNA sequence from clone RP23-273P3 on chromosome 11 Contains
            the 5' end of a novel gene, two novel genes, the Taok1
            gene for TAO kinase 1, a eukaryotic translation
            initiation factor 2 subunit 1 alpha (Eif2s1) pseudogene,
            a ribosomal protein S2 (Rps2) pseudogene, the Cryba1 gene
            for crystallin beta A1 and two CpG islands, complete
            sequence
          Length = 220230

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 9350 gcctccccagcgacgccggc 9331
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>emb|AJ277471.1|OSA277471 Oryza sativa rbbi2-4 gene for putative Bowman Bird trypsin inhibitor
          Length = 3036

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 420  gaaggagaggccgtgggcgtgctgcaac 447
            |||| |||||||||||| ||||||||||
Sbjct: 2020 gaagaagaggccgtgggagtgctgcaac 2047
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>gb|AC022780.19| Mus musculus chromosome 11, clone RP23-179C3, complete sequence
          Length = 237498

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   gcctccccagcgacgccggc 138
             ||||||||||||||||||||
Sbjct: 10299 gcctccccagcgacgccggc 10318
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>dbj|AK153809.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:C920003C23
            product:Hypothetical alpha/beta-Hydrolases structure
            containing protein, full insert sequence
          Length = 3235

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1386 gcctccccagcgacgccggc 1367
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>ref|NM_026185.1| Mus musculus RIKEN cDNA 1300007F04 gene (1300007F04Rik), mRNA
          Length = 2663

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1384 gcctccccagcgacgccggc 1365
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>dbj|AK018696.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
            full-length enriched library, clone:C920019P20
            product:hypothetical alpha/beta-Hydrolases structure
            containing protein, full insert sequence
          Length = 1436

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1002 gcctccccagcgacgccggc 983
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 250     gagaggccgtggtcgtgctgcaac 273
               ||||||||| ||||||||||||||
Sbjct: 1681304 gagaggccgaggtcgtgctgcaac 1681327
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>dbj|AK040037.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430048L21 product:hypothetical protein,
           full insert sequence
          Length = 1732

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 119 gcctccccagcgacgccggc 138
           ||||||||||||||||||||
Sbjct: 433 gcctccccagcgacgccggc 452
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>dbj|AK046590.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
            enriched library, clone:B430113H14 product:Hypothetical
            alpha/beta-Hydrolases structure containing protein, full
            insert sequence
          Length = 3085

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1388 gcctccccagcgacgccggc 1369
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>dbj|AK040172.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched
           library, clone:A430072G18 product:hypothetical protein,
           full insert sequence
          Length = 595

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 gcctccccagcgacgccggc 138
           ||||||||||||||||||||
Sbjct: 152 gcctccccagcgacgccggc 133
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>dbj|AK042032.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:A630053J01 product:RIKEN cDNA 1300007F04
            gene, full insert sequence
          Length = 1404

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1003 gcctccccagcgacgccggc 984
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>dbj|AK004929.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched
            library, clone:1300007F04 product:hypothetical
            alpha/beta-Hydrolases structure containing protein, full
            insert sequence
          Length = 2663

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 119  gcctccccagcgacgccggc 138
            ||||||||||||||||||||
Sbjct: 1384 gcctccccagcgacgccggc 1365
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 420      gaaggagaggccgtgggcgtgctgcaac 447
                |||| |||||||||||| ||||||||||
Sbjct: 16273332 gaagaagaggccgtgggagtgctgcaac 16273305
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 212      gggaggagaacgacgtcagcggcg 235
                |||||||||||||||||| |||||
Sbjct: 29843753 gggaggagaacgacgtcaacggcg 29843730
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 232     ggcgtcctcggcgaggagga 251
               ||||||||||||||||||||
Sbjct: 6383420 ggcgtcctcggcgaggagga 6383401
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 85      gtcgccgccgatgccgtggg 104
               ||||||||||||||||||||
Sbjct: 1199928 gtcgccgccgatgccgtggg 1199909
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>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_H04
          Length = 151699

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 420   gaaggagaggccgtgggcgtgctgcaac 447
             |||| |||||||||||| ||||||||||
Sbjct: 93770 gaagaagaggccgtgggagtgctgcaac 93743
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>dbj|AK107032.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B04, full
           insert sequence
          Length = 1159

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 129 cgacgccggcgaaggtctcg 148
           ||||||||||||||||||||
Sbjct: 348 cgacgccggcgaaggtctcg 329
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    atgcctggacgaggtggagg 331
              ||||||||||||||||||||
Sbjct: 719364 atgcctggacgaggtggagg 719383
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>dbj|AB070936.1| Streptomyces avermitilis siderophore biosynthetic gene cluster
          Length = 10056

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 232  ggcgtcctcggcgaggagga 251
            ||||||||||||||||||||
Sbjct: 1831 ggcgtcctcggcgaggagga 1812


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,134,940
Number of Sequences: 3902068
Number of extensions: 3134940
Number of successful extensions: 61822
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60880
Number of HSP's gapped (non-prelim): 942
length of query: 487
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 465
effective length of database: 17,147,199,772
effective search space: 7973447893980
effective search space used: 7973447893980
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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