Clone Name | bastl04c01 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_482758.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgcgcagcacggcagcagcag 49 ||||||||||||||||||||| Sbjct: 115 cgcgcagcacggcagcagcag 95
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16 map C481S, complete sequence Length = 179668 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 162 ccaccccccacgcgccgcccgcccg 186 ||||||||| ||||||||||||||| Sbjct: 146393 ccaccccccgcgcgccgcccgcccg 146417
>ref|XM_365394.1| Magnaporthe grisea 70-15 hypothetical protein (MG02096.4) partial mRNA Length = 2478 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 22 tcttcctcgcgcagcacggcagcag 46 |||||||||| |||||||||||||| Sbjct: 2093 tcttcctcgcccagcacggcagcag 2117
>ref|XM_958778.1| Neurospora crassa OR74A hypothetical protein (NCU03063.1) partial mRNA Length = 2109 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 ccccctccttctactcccctgtcttcctc 29 |||||||||||| |||||||| ||||||| Sbjct: 2056 ccccctccttcttctcccctgccttcctc 2028
>ref|XM_330498.1| Neurospora crassa OR74A hypothetical protein (NCU03063.1) partial mRNA Length = 2109 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1 ccccctccttctactcccctgtcttcctc 29 |||||||||||| |||||||| ||||||| Sbjct: 2056 ccccctccttcttctcccctgccttcctc 2028
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgcgcagcacggcagcagcag 49 ||||||||||||||||||||| Sbjct: 22368574 cgcgcagcacggcagcagcag 22368554
>dbj|AP005483.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1144B06 Length = 133689 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 29 cgcgcagcacggcagcagcag 49 ||||||||||||||||||||| Sbjct: 65557 cgcgcagcacggcagcagcag 65537
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 actcgcctccggctgcgagc 310 |||||||||||||||||||| Sbjct: 234545 actcgcctccggctgcgagc 234526
>gb|AF160191.1| Aplysia californica MIP-related peptide precursor (MRP) mRNA, complete cds Length = 3263 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 gcagcacggcagcagcagga 51 |||||||||||||||||||| Sbjct: 602 gcagcacggcagcagcagga 621
>gb|AC093560.2| Homo sapiens chromosome 1 clone RP11-398H19, complete sequence Length = 199594 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 ccccacgcgccgcccgcccg 186 |||||||||||||||||||| Sbjct: 123041 ccccacgcgccgcccgcccg 123022
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 170 cacgcgccgcccgcccgagg 189 |||||||||||||||||||| Sbjct: 8038562 cacgcgccgcccgcccgagg 8038543
>gb|M80674.1|STMTCREP Streptomyces glaucescens tcm operon Length = 13123 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 338 gaccccctgccgcgcgcgga 357 |||||||||||||||||||| Sbjct: 11882 gaccccctgccgcgcgcgga 11901 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,985,013 Number of Sequences: 3902068 Number of extensions: 1985013 Number of successful extensions: 35372 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 35237 Number of HSP's gapped (non-prelim): 135 length of query: 424 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 402 effective length of database: 17,147,199,772 effective search space: 6893174308344 effective search space used: 6893174308344 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)