ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK109713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 206 5e-50
2gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 107 3e-20
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 107 3e-20
5gb|AC004948.2| Homo sapiens PAC clone RP5-1007H16 from 7, comple... 46 0.10
6emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, ... 46 0.10
7gb|DQ003136.1| Homo sapiens replication protein A3, 14kDa (RPA3)... 46 0.10
8emb|AL138639.1|ATT21C14 Arabidopsis thaliana DNA chromosome 3, B... 46 0.10
9gb|AF077408.1|T7M24 Arabidopsis thaliana BAC T7M24 46 0.10
10gb|AC079327.3| Homo sapiens chromosome 18, clone RP11-240N5, com... 44 0.41
11gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromoso... 44 0.41
12gb|AC115800.13| Mus musculus chromosome 8, clone RP23-407E22, co... 42 1.6
13gb|AC104266.7| Homo sapiens chromosome 15, clone CTD-3217P20, co... 42 1.6
14gb|AC021316.16| Homo sapiens chromosome 15, clone RP11-11J16, co... 42 1.6
15ref|XM_694041.1| PREDICTED: Danio rerio similar to CG8585-PA (LO... 42 1.6
16emb|AJ234590.1|HVU234590 Hordeum vulgare genomic DNA fragment; c... 42 1.6
17gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome... 40 6.4
18gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.4
19ref|XM_714236.1| Candida albicans SC5314 hypothetical protein (C... 40 6.4
20gb|AC091405.3| Danio rerio clone 188M5, complete sequence 40 6.4
21emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in... 40 6.4
22emb|BX571762.15| Zebrafish DNA sequence from clone CH211-214G1 i... 40 6.4
23emb|BX571758.10| Zebrafish DNA sequence from clone CH211-34K1 in... 40 6.4
24gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, com... 40 6.4
25gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell... 40 6.4
26gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell ... 40 6.4
27gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, c... 40 6.4
28gb|AC160103.2| Mus musculus BAC clone RP24-422I4 from chromosome... 40 6.4
29gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-27... 40 6.4
30dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.4
31gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the ... 40 6.4
32emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in ... 40 6.4
33gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67... 40 6.4
34emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.4
35gb|AC005262.1|AC005262 Homo sapiens chromosome 19, cosmid F23990... 40 6.4
36dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic... 40 6.4

>dbj|AK109713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H04, full
           insert sequence
          Length = 1522

 Score =  206 bits (104), Expect = 5e-50
 Identities = 299/364 (82%)
 Strand = Plus / Plus

                                                                       
Query: 111 ggcggcgcggtacccggcgctcgtaccccgcggaggcgccggttctttcaccggcaccgt 170
           |||||||||| ||||||||||||| ||||| || ||||  || |  ||| |||| |||||
Sbjct: 218 ggcggcgcggcacccggcgctcgtgccccgtggcggcgaggggtgcttctccgggaccgt 277

                                                                       
Query: 171 cctcgatgtggtctccaggggcgggatccgcggtggcgaggggaggctctggctctccgt 230
           |   || |||| | |||||||| ||| |||||| || |||| ||||||||||||||||| 
Sbjct: 278 cgcggaagtggcccccaggggcaggagccgcggcggggaggcgaggctctggctctccga 337

                                                                       
Query: 231 ggacgccatggccagcgccgggctgcggcatgggtgcctcgtctctgtgtcactcgtttc 290
           |  |||||||| | |||||| |||||||| ||||||||||||||| || || ||| ||||
Sbjct: 338 gcccgccatggtcggcgccgcgctgcggcctgggtgcctcgtctccgtatctctcatttc 397

                                                                       
Query: 291 ttcaagtagtaacagtttagatggcttcccacttgatagcttatttgaggagtgcgccag 350
           ||||| |||     | | |||||| |  ||||||||||| |||||||||||||||  |  
Sbjct: 398 ttcaaataggggtcgatcagatggttcaccacttgatagtttatttgaggagtgcaacga 457

                                                                       
Query: 351 attctttgatcttgatgtggacaatgatctcatctctaatgaagctggagtgaactttgt 410
            |||||||||||||||||||| |||||||||||  |||||||||||||    ||||||||
Sbjct: 458 gttctttgatcttgatgtggataatgatctcatgcctaatgaagctggtcgaaactttgt 517

                                                                       
Query: 411 gactgccaaagtttccccttcatgtgaggttcaaaagaatgacatcaagctctcttggga 470
           || ||||||||||| ||| ||| ||||||| ||||||||||  |||||||| ||||||||
Sbjct: 518 gattgccaaagttttcccctcacgtgaggtccaaaagaatggtatcaagctgtcttggga 577

               
Query: 471 cctt 474
           ||||
Sbjct: 578 cctt 581



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>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNAb0050G15, complete sequence
          Length = 126156

 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                         
Query: 319   ccacttgatagcttatttgaggagtgcgccagattctttgatcttgatgtggacaatgat 378
             ||||||||||| |||||||||||||||  |   |||||||||||||||||||| ||||||
Sbjct: 61498 ccacttgatagtttatttgaggagtgcaacgagttctttgatcttgatgtggataatgat 61557

                                                                         
Query: 379   ctcatctctaatgaagctggagtgaactttgtgactgccaaagtttccccttcatgtgag 438
             |||||  |||||||||||||    |||||||||| ||||||||||| ||| ||| |||||
Sbjct: 61558 ctcatgcctaatgaagctggtcgaaactttgtgattgccaaagttttcccctcacgtgag 61617

               
Query: 439   gt 440
             ||
Sbjct: 61618 gt 61619



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 136/165 (82%)
 Strand = Plus / Plus

                                                                         
Query: 111   ggcggcgcggtacccggcgctcgtaccccgcggaggcgccggttctttcaccggcaccgt 170
             |||||||||| ||||||||||||| ||||| || ||||  || |  ||| |||| |||||
Sbjct: 60735 ggcggcgcggcacccggcgctcgtgccccgtggcggcgaggggtgcttctccgggaccgt 60794

                                                                         
Query: 171   cctcgatgtggtctccaggggcgggatccgcggtggcgaggggaggctctggctctccgt 230
             |   || |||| | |||||||| ||| |||||| || |||| ||||||||||||||||| 
Sbjct: 60795 cgcggaagtggcccccaggggcaggagccgcggcggggaggcgaggctctggctctccga 60854

                                                          
Query: 231   ggacgccatggccagcgccgggctgcggcatgggtgcctcgtctc 275
             |  |||||||| | |||||| |||||||| |||||||||||||||
Sbjct: 60855 gcccgccatggtcggcgccgcgctgcggcctgggtgcctcgtctc 60899



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 437   aggttcaaaagaatgacatcaagctctcttgggacctt 474
             |||| ||||||||||  |||||||| ||||||||||||
Sbjct: 61722 aggtccaaaagaatggtatcaagctgtcttgggacctt 61759



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                           
Query: 319     ccacttgatagcttatttgaggagtgcgccagattctttgatcttgatgtggacaatgat 378
               ||||||||||| |||||||||||||||  |   |||||||||||||||||||| ||||||
Sbjct: 6212064 ccacttgatagtttatttgaggagtgcaacgagttctttgatcttgatgtggataatgat 6212123

                                                                           
Query: 379     ctcatctctaatgaagctggagtgaactttgtgactgccaaagtttccccttcatgtgag 438
               |||||  |||||||||||||    |||||||||| ||||||||||| ||| ||| |||||
Sbjct: 6212124 ctcatgcctaatgaagctggtcgaaactttgtgattgccaaagttttcccctcacgtgag 6212183

                 
Query: 439     gt 440
               ||
Sbjct: 6212184 gt 6212185



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 136/165 (82%)
 Strand = Plus / Plus

                                                                           
Query: 111     ggcggcgcggtacccggcgctcgtaccccgcggaggcgccggttctttcaccggcaccgt 170
               |||||||||| ||||||||||||| ||||| || ||||  || |  ||| |||| |||||
Sbjct: 6211301 ggcggcgcggcacccggcgctcgtgccccgtggcggcgaggggtgcttctccgggaccgt 6211360

                                                                           
Query: 171     cctcgatgtggtctccaggggcgggatccgcggtggcgaggggaggctctggctctccgt 230
               |   || |||| | |||||||| ||| |||||| || |||| ||||||||||||||||| 
Sbjct: 6211361 cgcggaagtggcccccaggggcaggagccgcggcggggaggcgaggctctggctctccga 6211420

                                                            
Query: 231     ggacgccatggccagcgccgggctgcggcatgggtgcctcgtctc 275
               |  |||||||| | |||||| |||||||| |||||||||||||||
Sbjct: 6211421 gcccgccatggtcggcgccgcgctgcggcctgggtgcctcgtctc 6211465



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 437     aggttcaaaagaatgacatcaagctctcttgggacctt 474
               |||| ||||||||||  |||||||| ||||||||||||
Sbjct: 6212288 aggtccaaaagaatggtatcaagctgtcttgggacctt 6212325



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  107 bits (54), Expect = 3e-20
 Identities = 105/122 (86%)
 Strand = Plus / Plus

                                                                           
Query: 319     ccacttgatagcttatttgaggagtgcgccagattctttgatcttgatgtggacaatgat 378
               ||||||||||| |||||||||||||||  |   |||||||||||||||||||| ||||||
Sbjct: 6278531 ccacttgatagtttatttgaggagtgcaacgagttctttgatcttgatgtggataatgat 6278590

                                                                           
Query: 379     ctcatctctaatgaagctggagtgaactttgtgactgccaaagtttccccttcatgtgag 438
               |||||  |||||||||||||    |||||||||| ||||||||||| ||| ||| |||||
Sbjct: 6278591 ctcatgcctaatgaagctggtcgaaactttgtgattgccaaagttttcccctcacgtgag 6278650

                 
Query: 439     gt 440
               ||
Sbjct: 6278651 gt 6278652



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 136/165 (82%)
 Strand = Plus / Plus

                                                                           
Query: 111     ggcggcgcggtacccggcgctcgtaccccgcggaggcgccggttctttcaccggcaccgt 170
               |||||||||| ||||||||||||| ||||| || ||||  || |  ||| |||| |||||
Sbjct: 6277768 ggcggcgcggcacccggcgctcgtgccccgtggcggcgaggggtgcttctccgggaccgt 6277827

                                                                           
Query: 171     cctcgatgtggtctccaggggcgggatccgcggtggcgaggggaggctctggctctccgt 230
               |   || |||| | |||||||| ||| |||||| || |||| ||||||||||||||||| 
Sbjct: 6277828 cgcggaagtggcccccaggggcaggagccgcggcggggaggcgaggctctggctctccga 6277887

                                                            
Query: 231     ggacgccatggccagcgccgggctgcggcatgggtgcctcgtctc 275
               |  |||||||| | |||||| |||||||| |||||||||||||||
Sbjct: 6277888 gcccgccatggtcggcgccgcgctgcggcctgggtgcctcgtctc 6277932



 Score = 44.1 bits (22), Expect = 0.41
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 437     aggttcaaaagaatgacatcaagctctcttgggacctt 474
               |||| ||||||||||  |||||||| ||||||||||||
Sbjct: 6278755 aggtccaaaagaatggtatcaagctgtcttgggacctt 6278792



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>gb|AC004948.2| Homo sapiens PAC clone RP5-1007H16 from 7, complete sequence
          Length = 75076

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 140   gcggaggcgccggttctttcacc 162
             |||||||||||||||||||||||
Sbjct: 24718 gcggaggcgccggttctttcacc 24740



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>emb|AL161498.2|ATCHRIV10 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 10
          Length = 196296

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 377   atctcatctctaatgaagctgga 399
             |||||||||||||||||||||||
Sbjct: 75063 atctcatctctaatgaagctgga 75041



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>gb|DQ003136.1| Homo sapiens replication protein A3, 14kDa (RPA3) gene, complete cds
          Length = 85575

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 140   gcggaggcgccggttctttcacc 162
             |||||||||||||||||||||||
Sbjct: 79335 gcggaggcgccggttctttcacc 79313



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>emb|AL138639.1|ATT21C14 Arabidopsis thaliana DNA chromosome 3, BAC clone T21C14
          Length = 79677

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 377   atctcatctctaatgaagctgga 399
             |||||||||||||||||||||||
Sbjct: 19942 atctcatctctaatgaagctgga 19964



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>gb|AF077408.1|T7M24 Arabidopsis thaliana BAC T7M24
          Length = 74475

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 377   atctcatctctaatgaagctgga 399
             |||||||||||||||||||||||
Sbjct: 22410 atctcatctctaatgaagctgga 22388



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>gb|AC079327.3| Homo sapiens chromosome 18, clone RP11-240N5, complete sequence
          Length = 165642

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 315    cttcccacttgatagcttattt 336
              ||||||||||||||||||||||
Sbjct: 156731 cttcccacttgatagcttattt 156752



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>gb|AC007632.4|AC007632 Homo sapiens clone R529C19B from chromosome 18, complete sequence
          Length = 205959

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 315   cttcccacttgatagcttattt 336
             ||||||||||||||||||||||
Sbjct: 99264 cttcccacttgatagcttattt 99243



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>gb|AC115800.13| Mus musculus chromosome 8, clone RP23-407E22, complete sequence
          Length = 228513

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 452   acatcaagctctcttgggacc 472
             |||||||||||||||||||||
Sbjct: 70274 acatcaagctctcttgggacc 70254



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>gb|AC104266.7| Homo sapiens chromosome 15, clone CTD-3217P20, complete sequence
          Length = 88425

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 209  aggggaggctctggctctccg 229
            |||||||||||||||||||||
Sbjct: 4313 aggggaggctctggctctccg 4333



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>gb|AC021316.16| Homo sapiens chromosome 15, clone RP11-11J16, complete sequence
          Length = 173535

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 209   aggggaggctctggctctccg 229
             |||||||||||||||||||||
Sbjct: 14337 aggggaggctctggctctccg 14317



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>ref|XM_694041.1| PREDICTED: Danio rerio similar to CG8585-PA (LOC570546), mRNA
          Length = 1032

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 166 accgtcctcgatgtggtctcc 186
           |||||||||||||||||||||
Sbjct: 535 accgtcctcgatgtggtctcc 555



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>emb|AJ234590.1|HVU234590 Hordeum vulgare genomic DNA fragment; clone MWG0850.rev
          Length = 452

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 227 ccgtggacgccatggccagcg 247
           |||||||||||||||||||||
Sbjct: 53  ccgtggacgccatggccagcg 33



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>gb|AC156802.7| Mus musculus BAC clone RP23-119P9 from chromosome 13, complete sequence
          Length = 209975

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    ttcccacttgatagcttatt 335
              ||||||||||||||||||||
Sbjct: 130846 ttcccacttgatagcttatt 130827



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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 353     tctttgatcttgatgtggac 372
               ||||||||||||||||||||
Sbjct: 2666905 tctttgatcttgatgtggac 2666886



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 342     gtgcgccagattctttgatc 361
               ||||||||||||||||||||
Sbjct: 2232045 gtgcgccagattctttgatc 2232026



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>ref|XM_714236.1| Candida albicans SC5314 hypothetical protein (CaO19_7567), mRNA
          Length = 1290

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  cttgatagcttatttgagga 341
            ||||||||||||||||||||
Sbjct: 1258 cttgatagcttatttgagga 1277



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>gb|AC091405.3| Danio rerio clone 188M5, complete sequence
          Length = 103165

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   agattctttgatcttgatgt 368
             ||||||||||||||||||||
Sbjct: 47471 agattctttgatcttgatgt 47452



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>emb|CR513790.9| Zebrafish DNA sequence from clone CH211-132F7 in linkage group 15,
              complete sequence
          Length = 157412

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    agattctttgatcttgatgt 368
              ||||||||||||||||||||
Sbjct: 146467 agattctttgatcttgatgt 146486



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>emb|BX571762.15| Zebrafish DNA sequence from clone CH211-214G1 in linkage group 15,
             complete sequence
          Length = 138829

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   agattctttgatcttgatgt 368
             ||||||||||||||||||||
Sbjct: 72073 agattctttgatcttgatgt 72092



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>emb|BX571758.10| Zebrafish DNA sequence from clone CH211-34K1 in linkage group 15,
             complete sequence
          Length = 104614

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 349   agattctttgatcttgatgt 368
             ||||||||||||||||||||
Sbjct: 93779 agattctttgatcttgatgt 93798



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>gb|AC106849.5| Homo sapiens chromosome 11, clone CTD-2154J7, complete sequence
          Length = 81277

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   tgaactttgtgactgccaaagttt 424
             |||| |||||||||||||||||||
Sbjct: 27459 tgaattttgtgactgccaaagttt 27482



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>gb|AC009379.7| Drosophila melanogaster 3L BAC RP98-48M6 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 175963

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 430   tcatgtgaggttcaaaagaatgac 453
             |||||| |||||||||||||||||
Sbjct: 27812 tcatgtaaggttcaaaagaatgac 27835



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>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 180387

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   tcatgtgaggttcaaaagaatgac 453
             |||||| |||||||||||||||||
Sbjct: 82477 tcatgtaaggttcaaaagaatgac 82454



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>gb|AC110058.4| Homo sapiens chromosome 11, clone CTD2-3012A18, complete sequence
          Length = 158915

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 401   tgaactttgtgactgccaaagttt 424
             |||| |||||||||||||||||||
Sbjct: 78771 tgaattttgtgactgccaaagttt 78748



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>gb|AC160103.2| Mus musculus BAC clone RP24-422I4 from chromosome 13, complete sequence
          Length = 201998

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    ttcccacttgatagcttatt 335
              ||||||||||||||||||||
Sbjct: 184551 ttcccacttgatagcttatt 184532



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>gb|AC021699.5|AC021699 Homo sapiens chromosome 11, clone RP11-277B22, complete sequence
          Length = 163386

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 401   tgaactttgtgactgccaaagttt 424
             |||| |||||||||||||||||||
Sbjct: 65009 tgaattttgtgactgccaaagttt 65032



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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 111     ggcggcgcggtacccggcgc 130
               ||||||||||||||||||||
Sbjct: 3636164 ggcggcgcggtacccggcgc 3636145



 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 234    cgccatggccagcgccgggc 253
              ||||||||||||||||||||
Sbjct: 743749 cgccatggccagcgccgggc 743768



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>gb|AE005040.1| Halobacterium sp. NRC-1 section 71 of 170 of the complete genome
          Length = 10881

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 3  gaagaagccgtcggtgtccc 22
          ||||||||||||||||||||
Sbjct: 46 gaagaagccgtcggtgtccc 65



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>emb|BX248515.4| Zebrafish DNA sequence from clone DKEY-177P2 in linkage group 20,
             complete sequence
          Length = 212105

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 286   gtttcttcaagtagtaacagttta 309
             |||||||||||| |||||||||||
Sbjct: 80443 gtttcttcaagtcgtaacagttta 80466



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>gb|AE003518.3| Drosophila melanogaster chromosome 3L, section 67 of 83 of the complete
              sequence
          Length = 279088

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 430    tcatgtgaggttcaaaagaatgac 453
              |||||| |||||||||||||||||
Sbjct: 261957 tcatgtaaggttcaaaagaatgac 261934



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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 162    cggcaccgtcctcgatgtggtctc 185
              ||||||||||||||||||| ||||
Sbjct: 500103 cggcaccgtcctcgatgtgctctc 500080



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>gb|AC005262.1|AC005262 Homo sapiens chromosome 19, cosmid F23990, complete sequence
          Length = 44235

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   gcgccgggctgcggcatggg 264
             ||||||||||||||||||||
Sbjct: 26034 gcgccgggctgcggcatggg 26053



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>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster
          Length = 104326

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 111  ggcggcgcggtacccggcgc 130
            ||||||||||||||||||||
Sbjct: 1641 ggcggcgcggtacccggcgc 1660


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,384,044
Number of Sequences: 3902068
Number of extensions: 3384044
Number of successful extensions: 62832
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62563
Number of HSP's gapped (non-prelim): 261
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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