>CESA3_ARATH (Q941L0) Cellulose synthase A catalytic subunit 3 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-3) (Constitutive expression of VSP1
           protein 1) (Isoxaben resistant protein 1) (Ath-B)
          Length = 1065

 Score = 80.1 bits (196), Expect = 3e-15
 Identities = 30/43 (69%), Positives = 38/43 (88%)
 Frame = +2

Query: 350 CQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           CQIC+D++G TVDG+ F ACD+C FPVCRPCYE+ERK+G Q+C
Sbjct: 20  CQICSDNVGKTVDGDRFVACDICSFPVCRPCYEYERKDGNQSC 62

>CESA6_ARATH (Q94JQ6) Cellulose synthase A catalytic subunit 6 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-6) (Isoxaben resistant protein 2)
           (Protein PROCUSTE1) (Protein Quill) (AraxCelA)
          Length = 1084

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = +2

Query: 317 LKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           ++S +  +G  CQIC D +  TVDGE F AC+ C FPVCRPCYE+ER+EG QAC
Sbjct: 28  IRSVQELSGQTCQICRDEIELTVDGEPFVACNECAFPVCRPCYEYERREGNQAC 81

>CESA1_ARATH (O48946) Cellulose synthase A catalytic subunit 1 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-1) (Radially swollen protein 1)
           (AtRSW1)
          Length = 1081

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 33/60 (55%), Positives = 40/60 (66%)
 Frame = +2

Query: 299 DGDADALKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           DG    LK+     G +CQIC D +G    G+VF AC+ C FPVCRPCYE+ERK+GTQ C
Sbjct: 25  DGGTKPLKNMN---GQICQICGDDVGLAETGDVFVACNECAFPVCRPCYEYERKDGTQCC 81

>CESA5_ARATH (Q8L778) Cellulose synthase A catalytic subunit 5 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-5)
          Length = 1069

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +2

Query: 317 LKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           ++S    +G  CQIC D +  +VDGE F AC+ C FPVCRPCYE+ER+EG Q+C
Sbjct: 28  IRSVEELSGQTCQICGDEIELSVDGESFVACNECAFPVCRPCYEYERREGNQSC 81

>CESA7_ARATH (Q9SWW6) Cellulose synthase A catalytic subunit 7 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-7) (Irregular xylem protein 3)
           (AtIRX3)
          Length = 1026

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +2

Query: 341 GDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           G  C+IC D +G TV+G++F AC+ C FP CRPCYE+ER+EGTQ C
Sbjct: 34  GQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNC 79

>CESA2_ARATH (O48947) Cellulose synthase A catalytic subunit 2 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-2) (Ath-A)
          Length = 1084

 Score = 75.5 bits (184), Expect = 7e-14
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = +2

Query: 317 LKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           ++S +  +G  CQIC D +  TV  E+F AC+ C FPVCRPCYE+ER+EG QAC
Sbjct: 28  IRSVQELSGQTCQICGDEIELTVSSELFVACNECAFPVCRPCYEYERREGNQAC 81

>CESAA_ARATH (Q9SKJ5) Probable cellulose synthase A catalytic subunit 10|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-10) (AtCesA-13)
          Length = 1065

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 31/63 (49%), Positives = 40/63 (63%)
 Frame = +2

Query: 290 RAMDGDADALKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGT 469
           R  D   D LK  +   G +CQIC D +G T  G VF AC+ C FP+C+ CYE+ERK+G+
Sbjct: 13  RNRDDSDDGLKPLKDLNGQICQICGDDVGLTKTGNVFVACNECGFPLCQSCYEYERKDGS 72

Query: 470 QAC 478
           Q C
Sbjct: 73  QCC 75

>CESA9_ARATH (Q9SJ22) Probable cellulose synthase A catalytic subunit 9|
           [UDP-forming] (EC 2.4.1.12) (AtCesA-9)
          Length = 1088

 Score = 72.4 bits (176), Expect = 6e-13
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = +2

Query: 305 DADALKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           D   ++S    +G  C+IC D +  T +GE F AC+ C FP CRPCYE+ER+EG QAC
Sbjct: 24  DTARIRSAEELSGQTCKICRDEIELTDNGEPFIACNECAFPTCRPCYEYERREGNQAC 81

>CESA4_ARATH (Q84JA6) Cellulose synthase A catalytic subunit 4 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-4) (Irregular xylem protein 5)
           (AtIRX5)
          Length = 1049

 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = +2

Query: 347 VCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           +C++C D +    +G+ F AC VC +PVC+PCYE+ER  G + C
Sbjct: 22  ICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCC 65

>CESA8_ARATH (Q8LPK5) Cellulose synthase A catalytic subunit 8 [UDP-forming] (EC|
           2.4.1.12) (AtCesA-8) (Irregular xylem protein 1)
           (AtIRX1)
          Length = 985

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 19/44 (43%), Positives = 27/44 (61%)
 Frame = +2

Query: 347 VCQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
           +C  C + +G   +GE F AC  C FP+C+ C E+E KEG + C
Sbjct: 8   ICNTCGEEIGVKSNGEFFVACHECSFPICKACLEYEFKEGRRIC 51

>TSA4_GIALA (P21849) Major surface-labeled trophozoite antigen 417 precursor|
          Length = 713

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
 Frame = +2

Query: 284 PCR-AMDGDAD----ALKSGRHGAGDV-CQICADSLGTTVDGEVFTACDVCRFPVCRPCY 445
           PC  + DG A+    AL SGR GA  V C  C D    + D     A   C+ P C+ C 
Sbjct: 287 PCNDSTDGIANCATCALVSGRSGAALVTCSACTDGYKPSADKTTCEAVSNCKTPGCKAC- 345

Query: 446 EHERKE 463
            +E KE
Sbjct: 346 SNEGKE 351

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
 Frame = +2

Query: 266 AVPG*SPCRAMD----GDADALKSGRHGAGDVCQICADSLGTTVDGEVFTACDVCRFPVC 433
           AV G SP R  D    G A   + G    GDVC +C D +   +  + F     C    C
Sbjct: 84  AVSGGSPPREEDPGSCGGAPPREDGGSDEGDVCAVCTDEIAPHLRCDTFP----CMHRFC 139

Query: 434 RPC 442
            PC
Sbjct: 140 IPC 142

>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (VMW118 protein)|
          Length = 825

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +2

Query: 335 GAGDVCQICADSLGTTVDGEVFTACDVCRFPVCRPC 442
           G GDVC +C D +   +  + F     C  P C PC
Sbjct: 121 GGGDVCAVCTDEIAPPLRCQSFP----CLHPFCIPC 152

>PSB4_MOUSE (P99026) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3)
          Length = 264

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/65 (29%), Positives = 27/65 (41%)
 Frame = +2

Query: 221 RSGHWVGGAAPARLSAVPG*SPCRAMDGDADALKSGRHGAGDVCQICADSLGTTVDGEVF 400
           R+GHW GG AP +   +P  +P   MD  +   +       +        LG   DG V 
Sbjct: 8   RAGHWAGGPAPGQFYRIPA-TPSGLMDPASAPCEGPITRTQNPMVTGTSVLGVKFDGGVV 66

Query: 401 TACDV 415
            A D+
Sbjct: 67  IAADM 71

>ADRM1_MOUSE (Q9JKV1) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110) (ARM-1)
          Length = 407

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -3

Query: 414 TSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPT 235
           +S + ++  + V P  S      +PAP  P   ++ SPS A     P + +  + AA PT
Sbjct: 205 SSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPA-----PSSGNGTSTAASPT 259

Query: 234 Q 232
           Q
Sbjct: 260 Q 260

>RNZ2_MOUSE (Q80Y81) Zinc phosphodiesterase ELAC protein 2 (EC 3.1.26.11)|
           (Ribonuclease Z 2) (RNase Z 2) (tRNase Z 2) (tRNA 3
           endonuclease 2) (ElaC homolog protein 2)
          Length = 831

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -3

Query: 435 RQTGKRQTSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQP 274
           R+ GK+Q SQ+ +TSP+ + P+ S+         C P+  +SA  +    G  P
Sbjct: 181 RRCGKQQPSQSPRTSPNRLSPKQSSDSGSAENGQCPPE-DSSAGANRKAWGRDP 233

>PDE8B_HUMAN (O95263) High-affinity cAMP-specific and IBMX-insensitive|
           3',5'-cyclic phosphodiesterase 8B (EC 3.1.4.17)
           (HSPDE8B)
          Length = 885

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = -3

Query: 450 CS*QGRQTGKRQTSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMA---RQGD 280
           C      +  RQT+ +V   P+  +P L  Q   T  A  +P  RAS  PS+A   R   
Sbjct: 17  CRDSDESSSPRQTT-SVSQGPAAPLPGLFVQ---TDAADAIPPSRASGPPSVARVRRART 72

Query: 279 QPGTADNRAGAAP 241
           + G+  +   AAP
Sbjct: 73  ELGSGSSAGSAAP 85

>PSB4_RAT (P34067) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (RN3)
          Length = 263

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 221 RSGHWVGGAAPARLSAVPG*SPC 289
           R+GHW GG AP +   VP    C
Sbjct: 8   RTGHWAGGPAPGQFYRVPSTPSC 30

>ADRM1_HUMAN (Q16186) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -3

Query: 414 TSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPT 235
           +S + ++  + V P  +      +PAP  P   ++ SPS A     P + +  + AA PT
Sbjct: 205 SSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPA-----PSSGNGASTAASPT 259

Query: 234 Q 232
           Q
Sbjct: 260 Q 260

>PP1RA_PANTR (Q7YR38) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (MHC class I region proline-rich protein CAT53)
           (Protein FB19)
          Length = 940

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -3

Query: 393 SPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPTQCPE 223
           SP+   P        T P+   P     A PS A + D+PGT        PP + PE
Sbjct: 313 SPTAAKPSPFEGKTSTEPSTAKPSSPEPAPPSEAMEADRPGT------PVPPVEVPE 363

>HDAC9_MOUSE (Q99N13) Histone deacetylase 9 (HD9) (HD7B) (Histone|
           deacetylase-related protein) (MEF2-interacting
           transcription repressor MITR)
          Length = 588

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/82 (20%), Positives = 36/82 (43%)
 Frame = -3

Query: 465 PSLRSCS*QGRQTGKRQTSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQ 286
           P+L+  S   ++  +R++S  ++     +V     +++  + +  +      + PS    
Sbjct: 222 PNLKVRSRLKQKVAERRSSPLLRRKDGNLVTSFKKRVFEVAESS-VSSSSPGSGPSSPNN 280

Query: 285 GDQPGTADNRAGAAPPTQCPER 220
           G      +N A A PPT  PE+
Sbjct: 281 GPAGNVTENEASALPPTPHPEQ 302

>PERO_DROME (Q01603) Peroxidase precursor (EC 1.11.1.7) (DmPO)|
          Length = 690

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -3

Query: 348 TSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPTQC 229
           TSPAP  P F + ASP ++  G    TA   + AAPP  C
Sbjct: 62  TSPAPQNP-FSSPASPPVSAYGYSFPTAGRVSCAAPPAVC 100

>ADRM1_RAT (Q9JMB5) Adhesion-regulating molecule 1 precursor (110 kDa cell|
           membrane glycoprotein) (Gp110)
          Length = 407

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -3

Query: 414 TSQAVKTSPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPT 235
           +S + ++  + V P  +      +PAP  P   ++ SPS A     P + +  + AA PT
Sbjct: 205 SSSSSRSQSAAVTPSSTTSSARATPAPSAPAAASATSPSPA-----PSSGNGTSTAASPT 259

Query: 234 Q 232
           Q
Sbjct: 260 Q 260

>PSB4_PIG (Q29384) Proteasome subunit beta type 4 precursor (EC 3.4.25.1)|
           (Proteasome beta chain) (Macropain beta chain)
           (Multicatalytic endopeptidase complex beta chain)
           (Proteasome chain 3) (Fragment)
          Length = 154

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 221 RSGHWVGGAAPARLSAVP 274
           RSGHW GG AP +   +P
Sbjct: 8   RSGHWAGGPAPGQFYRIP 25

>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 6)
           (Ubiquitin-specific-processing protease 6)
           (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2)
          Length = 1406

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 21/69 (30%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
 Frame = -3

Query: 423 KRQTSQAVKTSPSTVVPRLSAQI---WHTSPAPCLPDFRASASPSMARQGDQPGTADNRA 253
           K Q  + +KTS   +  RL  Q    W  +    L   RAS      +QGD P  A    
Sbjct: 305 KVQQKRLMKTSRCGLWARLRNQFFDTWAMNDDTVLKHLRASTKKLTRKQGDLPPPAKREQ 364

Query: 252 GAAPPTQCP 226
           G+  P   P
Sbjct: 365 GSLAPRPVP 373

>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10 (Phosphatase 1 nuclear targeting subunit) (MHC class
           I region proline-rich protein CAT53) (FB19 protein)
           (PP1-binding protein of 114 kDa) (p99)
          Length = 940

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 18/57 (31%), Positives = 22/57 (38%)
 Frame = -3

Query: 393 SPSTVVPRLSAQIWHTSPAPCLPDFRASASPSMARQGDQPGTADNRAGAAPPTQCPE 223
           SP+   P        T P+   P     A PS A   D+PGT        PP + PE
Sbjct: 313 SPTAAKPSPFEGKTSTEPSTAKPSSPEPAPPSEAMDADRPGT------PVPPVEVPE 363

>VWF_MOUSE (Q8CIZ8) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/43 (32%), Positives = 17/43 (39%)
 Frame = +2

Query: 350  CQICADSLGTTVDGEVFTACDVCRFPVCRPCYEHERKEGTQAC 478
            CQIC    G  ++      C   R P C PC     K+ T  C
Sbjct: 2278 CQICMCLSGRKINCTA-QPCPTARAPTCGPCEVARLKQSTNLC 2319

>MOT3_YEAST (P54785) Transcriptional activator/repressor MOT3 (Modulator of|
           transcription protein 3) (Hypoxic gene repressor protein
           7)
          Length = 490

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 37  LPRQWLINQPIPSWKPTAEPTHRWWPVPFTTPSGS 141
           LP  W IN  +P  +PT  P H   PVP + P  S
Sbjct: 299 LPPGWKINT-MPQPRPTTAPNHPPAPVPSSNPVAS 332

>DPLD_DROME (Q9V4M2) Protein dappled|
          Length = 832

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 407 CDVCRFPVCRPCYEHERKEGTQA 475
           CD CR  VC+ C  HE KE + A
Sbjct: 200 CDYCRKLVCQCCTLHEHKEHSYA 222


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,894,069
Number of Sequences: 219361
Number of extensions: 890156
Number of successful extensions: 3159
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3144
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)