ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bastl04b09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2682 Score = 256 bits (129), Expect = 6e-65 Identities = 280/329 (85%), Gaps = 6/329 (1%) Strand = Plus / Plus Query: 102 atgaccaagtccaagaacggctgcctcaagatcctc---tgcggcggcgccggatccgac 158 ||||| ||| |||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 1 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 60 Query: 159 gccaccgccggctccgaccccgagaccgacgcccacgccgacgagagcaaggccatctca 218 | |||||||||||||| ||| | || | ||||| |||||||| ||||||||| ||| Sbjct: 61 ccgtccgccggctccgacggcgacgcggatgaccacgtcgacgagaacaaggccatatca 120 Query: 219 gataaaagcagatggagctttcgaaggaggtctacaaggcaccgagttctgaagaattct 278 |||||||| || ||||||||||| ||||||||||||||||| || ||| ||||||||||| Sbjct: 121 gataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattct 180 Query: 279 gatatatccgagcctgaaactctaagttcgagcaaagcaaaagctgatgttgctccaagc 338 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 181 gatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagc 240 Query: 339 aacaatgtctactcttcaacatactcttattcctcagagaagcccctgcatctagagaag 398 |||| |||| |||||||| ||||| ||| ||||||| || || || || | |||||| Sbjct: 241 aaca---tctattcttcaacttactcctatgcctcagaaaaacctctacagcaagagaaa 297 Query: 399 ccagatgagaagattgtgcttcaagagaa 427 ||||||||||| ||| ||| |||||||| Sbjct: 298 ccagatgagaaaattctgcagcaagagaa 326
>dbj|AK066310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063E15, full insert sequence Length = 3170 Score = 256 bits (129), Expect = 6e-65 Identities = 280/329 (85%), Gaps = 6/329 (1%) Strand = Plus / Plus Query: 102 atgaccaagtccaagaacggctgcctcaagatcctc---tgcggcggcgccggatccgac 158 ||||| ||| |||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct: 165 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 224 Query: 159 gccaccgccggctccgaccccgagaccgacgcccacgccgacgagagcaaggccatctca 218 | |||||||||||||| ||| | || | ||||| |||||||| ||||||||| ||| Sbjct: 225 ccgtccgccggctccgacggcgacgcggatgaccacgtcgacgagaacaaggccatatca 284 Query: 219 gataaaagcagatggagctttcgaaggaggtctacaaggcaccgagttctgaagaattct 278 |||||||| || ||||||||||| ||||||||||||||||| || ||| ||||||||||| Sbjct: 285 gataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgttttgaagaattct 344 Query: 279 gatatatccgagcctgaaactctaagttcgagcaaagcaaaagctgatgttgctccaagc 338 |||||||| || ||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 345 gatatatctgaacctgaaactcttagttcgagcaaagcaaaagctgaaattgctccaagc 404 Query: 339 aacaatgtctactcttcaacatactcttattcctcagagaagcccctgcatctagagaag 398 |||| |||| |||||||| ||||| ||| ||||||| || || || || | |||||| Sbjct: 405 aaca---tctattcttcaacttactcctatgcctcagaaaaacctctacagcaagagaaa 461 Query: 399 ccagatgagaagattgtgcttcaagagaa 427 ||||||||||| ||| ||| |||||||| Sbjct: 462 ccagatgagaaaattctgcagcaagagaa 490
>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01, complete sequence Length = 163448 Score = 198 bits (100), Expect = 1e-47 Identities = 192/222 (86%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 206 caaggccatctcagataaaagcagatggagctttcgaaggaggtctacaaggcaccgagt 265 ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || || Sbjct: 87449 caaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgt 87508 Query: 266 tctgaagaattctgatatatccgagcctgaaactctaagttcgagcaaagcaaaagctga 325 | ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 87509 tttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctga 87568 Query: 326 tgttgctccaagcaacaatgtctactcttcaacatactcttattcctcagagaagcccct 385 ||||||||||||||| |||| |||||||| ||||| ||| ||||||| || || || Sbjct: 87569 aattgctccaagcaaca---tctattcttcaacttactcctatgcctcagaaaaacctct 87625 Query: 386 gcatctagagaagccagatgagaagattgtgcttcaagagaa 427 || | |||||| ||||||||||| ||| ||| |||||||| Sbjct: 87626 acagcaagagaaaccagatgagaaaattctgcagcaagagaa 87667 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/78 (87%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 102 atgaccaagtccaagaacggctgcctcaagatcct---ctgcggcggcgccggatccgac 158 ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 85875 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 85934 Query: 159 gccaccgccggctccgac 176 | |||||||||||||| Sbjct: 85935 ccgtccgccggctccgac 85952
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 198 bits (100), Expect = 1e-47 Identities = 192/222 (86%), Gaps = 3/222 (1%) Strand = Plus / Plus Query: 206 caaggccatctcagataaaagcagatggagctttcgaaggaggtctacaaggcaccgagt 265 ||||||||| ||||||||||| || ||||||||||| ||||||||||||||||| || || Sbjct: 33875550 caaggccatatcagataaaagtaggtggagctttcgtaggaggtctacaaggcatcgtgt 33875609 Query: 266 tctgaagaattctgatatatccgagcctgaaactctaagttcgagcaaagcaaaagctga 325 | ||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct: 33875610 tttgaagaattctgatatatctgaacctgaaactcttagttcgagcaaagcaaaagctga 33875669 Query: 326 tgttgctccaagcaacaatgtctactcttcaacatactcttattcctcagagaagcccct 385 ||||||||||||||| |||| |||||||| ||||| ||| ||||||| || || || Sbjct: 33875670 aattgctccaagcaaca---tctattcttcaacttactcctatgcctcagaaaaacctct 33875726 Query: 386 gcatctagagaagccagatgagaagattgtgcttcaagagaa 427 || | |||||| ||||||||||| ||| ||| |||||||| Sbjct: 33875727 acagcaagagaaaccagatgagaaaattctgcagcaagagaa 33875768 Score = 71.9 bits (36), Expect = 2e-09 Identities = 68/78 (87%), Gaps = 3/78 (3%) Strand = Plus / Plus Query: 102 atgaccaagtccaagaacggctgcctcaagatcct---ctgcggcggcgccggatccgac 158 ||||| ||| ||||||||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 33873976 atgacgaagcccaagaacggctgcctcaagatcctcgcctgcgccggcggcggatccgac 33874035 Query: 159 gccaccgccggctccgac 176 | |||||||||||||| Sbjct: 33874036 ccgtccgccggctccgac 33874053
>dbj|AK120778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009J07, full insert sequence Length = 4121 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||||||||||||| Sbjct: 449 ggaggaggaggggtggtgaggagcgagc 476
>emb|CR596699.1| full-length cDNA clone CS0DI079YF06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2183 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 ccgaggcggcgccggcggccgga 58 ||||||||||||||||||||||| Sbjct: 389 ccgaggcggcgccggcggccgga 411
>ref|NM_178493.3| Homo sapiens notum pectinacetylesterase homolog (Drosophila) (NOTUM), mRNA Length = 2233 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 ccgaggcggcgccggcggccgga 58 ||||||||||||||||||||||| Sbjct: 396 ccgaggcggcgccggcggccgga 418
>gb|AC145207.2| Homo sapiens chromosome 17, clone RP11-498C9, complete sequence Length = 182848 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 ccgaggcggcgccggcggccgga 58 ||||||||||||||||||||||| Sbjct: 26186 ccgaggcggcgccggcggccgga 26208
>gb|BC060882.1| Homo sapiens notum pectinacetylesterase homolog (Drosophila), mRNA (cDNA clone MGC:71851 IMAGE:30336041), complete cds Length = 2233 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 36 ccgaggcggcgccggcggccgga 58 ||||||||||||||||||||||| Sbjct: 396 ccgaggcggcgccggcggccgga 418
>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the 5' end of the gene for regulator of differentiation 1 (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a CpG island.n, complete sequence Length = 64850 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 41 gcggcgccggcggccggaggag 62 |||||||||||||||||||||| Sbjct: 19582 gcggcgccggcggccggaggag 19561
>ref|XM_371097.4| PREDICTED: Homo sapiens similar to CG13076-PA, isoform A (LOC388444), mRNA Length = 1361 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 37 cgaggcggcgccggcggccgga 58 |||||||||||||||||||||| Sbjct: 374 cgaggcggcgccggcggccgga 395
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.41 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 38 gaggcggcgccggcggc-cggaggaggaggggag 70 ||||||||||||||||| ||||||||||||||| Sbjct: 2593900 gaggcggcgccggcggcggggaggaggaggggag 2593933 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgccggcggccggaggagga 64 ||||||||||||||||||||| Sbjct: 26911590 gcgccggcggccggaggagga 26911610 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cggccggaggaggaggggagg 71 ||||||||||||||||||||| Sbjct: 19703904 cggccggaggaggaggggagg 19703924
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggag 65 ||||||| |||||||||||||||||| Sbjct: 4275904 ggcggcggcggcggccggaggaggag 4275879 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ccgagaccgacgcccacgccgacg 201 |||||||||||||| ||||||||| Sbjct: 13048469 ccgagaccgacgccgacgccgacg 13048446
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 156 gacgccaccgccggctccgaccccgagaccgacg 189 |||||||||||| || || ||||||||||||||| Sbjct: 963153 gacgccaccgcccgcgcctaccccgagaccgacg 963186 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 37 cgaggcggcgccggcggccg 56 |||||||||||||||||||| Sbjct: 2272600 cgaggcggcgccggcggccg 2272619
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggag 65 ||||||| |||||||||||||||||| Sbjct: 121125 ggcggcggcggcggccggaggaggag 121100
>gb|AE005052.1| Halobacterium sp. NRC-1 section 83 of 170 of the complete genome Length = 10031 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 157 acgccaccgccggctccgaccccgag 182 |||||||||||||| ||||||||||| Sbjct: 5087 acgccaccgccggcaccgaccccgag 5062
>dbj|AK121018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049B21, full insert sequence Length = 577 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggag 65 ||||||| |||||||||||||||||| Sbjct: 29 ggcggcggcggcggccggaggaggag 54
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.41 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Plus Query: 38 gaggcggcgccggcggc-cggaggaggaggggag 70 ||||||||||||||||| ||||||||||||||| Sbjct: 2593844 gaggcggcgccggcggcggggaggaggaggggag 2593877 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgccggcggccggaggagga 64 ||||||||||||||||||||| Sbjct: 26839760 gcgccggcggccggaggagga 26839780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 51 cggccggaggaggaggggagg 71 ||||||||||||||||||||| Sbjct: 19630118 cggccggaggaggaggggagg 19630138
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 44.1 bits (22), Expect = 0.41 Identities = 32/34 (94%), Gaps = 1/34 (2%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggc-cggaggaggaggggag 70 ||||||||||||||||| ||||||||||||||| Sbjct: 74109 gaggcggcgccggcggcggggaggaggaggggag 74076
>gb|U25126.1|ASU25126 Anas sp. carboxypeptidase gp180 mRNA, complete cds Length = 4284 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 43 ggcgccggcggccggaggaggagggg 68 |||| ||||||||||||||||||||| Sbjct: 146 ggcggcggcggccggaggaggagggg 171
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0052C07, complete sequence Length = 154528 Score = 42.1 bits (21), Expect = 1.6 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggagg-ggaggtgag 75 ||||||| ||||||| ||||||||||| ||||||||| Sbjct: 83949 ggcggcggcggcggcgggaggaggaggtggaggtgag 83985
>ref|XM_468314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 873 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggga 69 ||||||||||||||||||||| Sbjct: 475 ggcggccggaggaggagggga 455
>ref|NM_196929.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0006L06.26), mRNA Length = 288 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagga 64 ||||||| ||||||||||||||||| Sbjct: 25 ggcggcggcggcggccggaggagga 49
>ref|NM_196711.1| Oryza sativa (japonica cultivar-group) translin-like protein (OSJNBb0015F09b.5), mRNA Length = 894 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggccggaggaggagg 66 ||||||||| ||||||| ||||||||||| Sbjct: 89 gaggcggcggcggcggcgggaggaggagg 61
>gb|AC134342.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E01, complete sequence Length = 180426 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cggcggccggaggaggagggg 68 ||||||||||||||||||||| Sbjct: 123091 cggcggccggaggaggagggg 123111
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgccggcggccggaggagga 64 ||||||||||||||||||||| Sbjct: 36557 gcgccggcggccggaggagga 36577
>ref|XM_418552.1| PREDICTED: Gallus gallus similar to M1851 (LOC420449), mRNA Length = 1674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 cgccggatccgacgccaccgc 166 ||||||||||||||||||||| Sbjct: 204 cgccggatccgacgccaccgc 224
>ref|XM_547492.2| PREDICTED: Canis familiaris similar to Beclin 1 (Coiled-coil myosin-like BCL2-interacting protein) (Protein GT197) (LOC490371), mRNA Length = 1359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 ggctgcctcaagatcctctgc 140 ||||||||||||||||||||| Sbjct: 591 ggctgcctcaagatcctctgc 571
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagga 64 ||||||| ||||||||||||||||| Sbjct: 73718 ggcggcggcggcggccggaggagga 73742
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0015F09b, complete sequence Length = 108964 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggccggaggaggagg 66 ||||||||| ||||||| ||||||||||| Sbjct: 15526 gaggcggcggcggcggcgggaggaggagg 15498
>ref|XM_392469.2| PREDICTED: Apis mellifera similar to CG5735-PB, isoform B (LOC408940), mRNA Length = 2130 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 172 ccgaccccgagaccgacgcccacgccgac 200 |||||||| | |||||||||||||||||| Sbjct: 1181 ccgaccccaacaccgacgcccacgccgac 1153
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagga 64 ||||||| ||||||||||||||||| Sbjct: 16729201 ggcggcggcggcggccggaggagga 16729225 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggccggaggaggagg 66 ||||||||| ||||||| ||||||||||| Sbjct: 15432180 gaggcggcggcggcggcgggaggaggagg 15432152 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4838777 ggcggcggcggcggccggaggagg 4838800 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4756754 ggcggcggcggcggccggaggagg 4756777 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4747827 ggcggcggcggcggccggaggagg 4747850 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4738925 ggcggcggcggcggccggaggagg 4738948
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cggcggccggaggaggagggg 68 ||||||||||||||||||||| Sbjct: 15730987 cggcggccggaggaggagggg 15731007
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggcggccggaggaggagggga 69 ||||||||||||||||||||| Sbjct: 34578196 ggcggccggaggaggagggga 34578216 Score = 40.1 bits (20), Expect = 6.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 32 tcacccgaggcggcgccggcggccggaggaggaggggagg 71 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 35238917 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 35238955 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ggccggaggaggaggggagg 71 |||||||||||||||||||| Sbjct: 23245908 ggccggaggaggaggggagg 23245889 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggggagg 71 ||||||| |||||| |||||||||||| |||| Sbjct: 20724219 ggcggcggcggcgggcggaggaggaggcgagg 20724250 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 14660033 ggaggaggaggggtggtggggagcgagc 14660060
>dbj|AP004064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1520_C09 Length = 145553 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggcggccggaggaggagggga 69 ||||||||||||||||||||| Sbjct: 89136 ggcggccggaggaggagggga 89156
>dbj|AP003996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1112_G06 Length = 122580 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 49 ggcggccggaggaggagggga 69 ||||||||||||||||||||| Sbjct: 44811 ggcggccggaggaggagggga 44831
>dbj|AK109650.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-A11, full insert sequence Length = 879 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggga 69 ||||||||||||||||||||| Sbjct: 481 ggcggccggaggaggagggga 461
>dbj|AK108335.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A05, full insert sequence Length = 720 Score = 42.1 bits (21), Expect = 1.6 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggagg-ggaggtgag 75 ||||||| ||||||| ||||||||||| ||||||||| Sbjct: 136 ggcggcggcggcggcgggaggaggaggtggaggtgag 172
>dbj|AK107743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-G12, full insert sequence Length = 887 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagga 64 ||||||| ||||||||||||||||| Sbjct: 453 ggcggcggcggcggccggaggagga 477
>dbj|AK063397.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H10, full insert sequence Length = 1082 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggccggaggaggagg 66 ||||||||| ||||||| ||||||||||| Sbjct: 80 gaggcggcggcggcggcgggaggaggagg 52
>gb|AY105288.1| Zea mays PCO140798 mRNA sequence Length = 718 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 tcagataaaagcagatggagctttc 240 ||||||||||||||||| ||||||| Sbjct: 159 tcagataaaagcagatgtagctttc 183
>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940123D9, complete sequence Length = 121336 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 cgagaccgacgcccacgccga 199 ||||||||||||||||||||| Sbjct: 73597 cgagaccgacgcccacgccga 73577
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagga 64 ||||||| ||||||||||||||||| Sbjct: 16738241 ggcggcggcggcggccggaggagga 16738265 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 38 gaggcggcgccggcggccggaggaggagg 66 ||||||||| ||||||| ||||||||||| Sbjct: 15440421 gaggcggcggcggcggcgggaggaggagg 15440393 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4839598 ggcggcggcggcggccggaggagg 4839621 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4757575 ggcggcggcggcggccggaggagg 4757598 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4748648 ggcggcggcggcggccggaggagg 4748671 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 4739746 ggcggcggcggcggccggaggagg 4739769
>gb|AC174464.1| Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence Length = 127821 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 140 cggcggcgccggatccgacgccaccgccg 168 ||||||||||||||||| |||| |||||| Sbjct: 117647 cggcggcgccggatccgtcgcccccgccg 117619
>emb|AL831803.4|CNS08CAG Oryza sativa chromosome 12, . BAC OSJNBb0016P08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142370 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 gcgccggcggccggaggagga 64 ||||||||||||||||||||| Sbjct: 115557 gcgccggcggccggaggagga 115577
>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133659 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 cggccggaggaggaggggagg 71 ||||||||||||||||||||| Sbjct: 23089 cggccggaggaggaggggagg 23069
>ref|XM_549977.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 261 ggcggcgccggcggccggag 280
>ref|XM_482379.1| Oryza sativa (japonica cultivar-group), mRNA Length = 977 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 72 ggcggcggcggcggccggaggagg 49
>ref|XM_507581.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13 mRNA Length = 983 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 78 ggcggcggcggcggccggaggagg 55
>ref|XM_507230.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007M04.13 mRNA Length = 1096 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 74 ggcggcggcggcggccggaggagg 51
>ref|XM_468434.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2030 Score = 40.1 bits (20), Expect = 6.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 32 tcacccgaggcggcgccggcggccggaggaggaggggagg 71 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 676 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 638
>ref|XM_466547.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ggccggaggaggaggggagg 71 |||||||||||||||||||| Sbjct: 899 ggccggaggaggaggggagg 880
>ref|XM_466153.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1190 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggggagg 71 ||||||| |||||| |||||||||||| |||| Sbjct: 83 ggcggcggcggcgggcggaggaggaggcgagg 52
>ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3199 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ccccgagaccgacgcccacgccga 199 ||||||||||||||||| |||||| Sbjct: 156 ccccgagaccgacgcccccgccga 179
>gb|AY534122.1|SEG_AY534122S1 Aegilops tauschii transposon XJ, complete sequence; putative Bowman Birk trypsin inhibitor gene, complete cds; Stowaway MITE, complete sequence; and insertion sequences xl_tt1a and xl_tt1b putative ripening related protein genes, complete cds Length = 26073 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ggcggccggaggaggagggg 68 |||||||||||||||||||| Sbjct: 5160 ggcggccggaggaggagggg 5179
>gb|AY022725.1| Oryza sativa microsatellite MRG5050 containing (CCG)X10, closest to marker R2561, genomic sequence Length = 230 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ccccgagaccgacgcccacgccga 199 ||||||||||||||||| |||||| Sbjct: 165 ccccgagaccgacgcccccgccga 142
>gb|AC135409.3| Rattus norvegicus 8 BAC CH230-416D7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 231716 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 agcccctgcatctagagaag 398 |||||||||||||||||||| Sbjct: 148492 agcccctgcatctagagaag 148473
>ref|XM_613703.2| PREDICTED: Bos taurus similar to F-box/WD-repeat protein 1A (F-box and WD-repeats protein beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit), transcript variant 2 (LOC534072), mRNA Length = 2282 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaggaggaggggaggtgagg 76 |||||||||||||||||||| Sbjct: 2072 gaggaggaggggaggtgagg 2053
>ref|XM_879241.1| PREDICTED: Bos taurus similar to F-box/WD-repeat protein 1A (F-box and WD-repeats protein beta-TrCP) (E3RSIkappaB) (pIkappaBalpha-E3 receptor subunit), transcript variant 3 (LOC534072), mRNA Length = 1818 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaggaggaggggaggtgagg 76 |||||||||||||||||||| Sbjct: 1608 gaggaggaggggaggtgagg 1589
>ref|XM_427314.1| PREDICTED: Gallus gallus similar to eukaryotic translation inititation factor 4B (LOC429759), partial mRNA Length = 1443 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 gaggaggaggggaggtgagg 76 |||||||||||||||||||| Sbjct: 722 gaggaggaggggaggtgagg 703
>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete sequence Length = 130193 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 12662 ggaggaggaggggtggtggggagcgagc 12635
>ref|NM_004384.2| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 1, mRNA Length = 4352 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 286 cgccggcggccggaggagga 267
>ref|NM_001031812.1| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 2, mRNA Length = 4280 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 286 cgccggcggccggaggagga 267
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 35 cccgaggcggcgccggcggccggaggag 62 |||| ||||||||||||||| ||||||| Sbjct: 68840 cccggggcggcgccggcggcgggaggag 68867
>ref|NM_181746.1| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 1, mRNA Length = 2392 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>ref|NM_013384.3| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 3, mRNA Length = 2178 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>ref|NM_022075.2| Homo sapiens LAG1 longevity assurance homolog 2 (S. cerevisiae) (LASS2), transcript variant 2, mRNA Length = 2352 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||||||||||| || ||||||||| Sbjct: 55 ggcggcgccggcggctggcggaggaggg 82
>gb|BC047567.1| Homo sapiens casein kinase 1, gamma 3, transcript variant 2, mRNA (cDNA clone MGC:48323 IMAGE:4817058), complete cds Length = 2717 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 24 cgccggcggccggaggagga 5
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 25290046 ggaggaggaggggtggtggggagcgagc 25290073
>ref|XM_887910.2| PREDICTED: Mus musculus RIKEN cDNA A930035D04 gene (A930035D04Rik), mRNA Length = 3533 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||| ||||||| |||||||||||| Sbjct: 724 ggcggcggcggcggcgggaggaggaggg 697
>ref|XM_994391.1| PREDICTED: Mus musculus RIKEN cDNA A930035D04 gene (A930035D04Rik), mRNA Length = 3530 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||| ||||||| |||||||||||| Sbjct: 718 ggcggcggcggcggcgggaggaggaggg 691
>ref|XM_950349.1| Theileria annulata strain Ankara hypothetical protein (TA18080) partial mRNA Length = 1269 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 catgaccaagtccaagaacg 120 |||||||||||||||||||| Sbjct: 1026 catgaccaagtccaagaacg 1045
>emb|AL590133.32| Human DNA sequence from clone RP11-316M1 on chromosome 1 Contains the SETDB1 gene for SET domain, bifurcated 1, the LASS2 gene for LAG1 longevity assurance homolog 2 (S. cerevisiae), the ANXA9 gene for annexin A9, the gene for a novel protein (FLJ11280), the gene for TcD37 homolog (HTCD37), the BNIPL gene for BCL2/adenovirus E1B 19kD interacting protein like, the gene for a novel protein (FLJ20519), the gene for small protein effector 1 of Cdc42 (SPEC1), the gene for ALL1-fused gene from chromosome 1q (AF1Q), two novel genes, the 5' end of a novel gene (MGC29891) and two CpG islands, complete sequence Length = 192096 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||||||||||| || ||||||||| Sbjct: 60982 ggcggcgccggcggctggcggaggaggg 60955
>emb|AL137059.20| Human DNA sequence from clone RP11-125I23 on chromosome 13 Contains the MTIF3 gene for mitochondrial translational initiation factor 3, the GTF3A gene for general transcription factor IIIA (AP2, TFIIIA) and two CpG islands, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 aagccagatgagaagattgt 415 |||||||||||||||||||| Sbjct: 100504 aagccagatgagaagattgt 100523
>emb|AL021528.1|HS394P21 Human DNA sequence from clone RP3-394P21 on chromosome 1p36.12-36.13 Contains the PAX7 gene for Paired box gene 7 and two CpG islands, complete sequence Length = 136124 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 aggaggaggggaggtgagga 77 |||||||||||||||||||| Sbjct: 86319 aggaggaggggaggtgagga 86338
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 154 ccgacgccaccgccggctccgaccccgagaccgacgcccacgccgacg 201 |||||||| ||||| | ||||| |||| |||||||||||||||||| Sbjct: 130872 ccgacgcccacgccgacgccgacgccgacgccgacgcccacgccgacg 130919
>ref|NM_031751.2| Rattus norvegicus SH3 and multiple ankyrin repeat domains 1 (Shank1), mRNA Length = 7585 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggg 68 |||||||||||||||||||| Sbjct: 2945 ggcggccggaggaggagggg 2926
>gb|AY993941.1| Microbacterium arborescens strain SE 14 cosmid MAS10D5, complete sequence Length = 33203 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gaccgacgcccacgccgacg 201 |||||||||||||||||||| Sbjct: 31013 gaccgacgcccacgccgacg 31032
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 ccgaccccgagaccgacgcc 191 |||||||||||||||||||| Sbjct: 27222 ccgaccccgagaccgacgcc 27241
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 agcggctcacccgaggcggcgccg 49 |||||| ||||||||||||||||| Sbjct: 1085835 agcggcgcacccgaggcggcgccg 1085812
>emb|AJ277468.1|OSA277468 Oryza sativa rbbi3-1 gene for putative Bowman Birk trypsin inhibitor Length = 17385 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 6429 ggcggcgccggcggccggag 6448
>gb|AC113336.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0011A24, from chromosome 10, complete sequence Length = 176832 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 144057 ggcggcggcggcggccggaggagg 144080 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 62034 ggcggcggcggcggccggaggagg 62057 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 53107 ggcggcggcggcggccggaggagg 53130 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 44205 ggcggcggcggcggccggaggagg 44228
>gb|AE006009.1| Caulobacter crescentus CB15 section 335 of 359 of the complete genome Length = 12052 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 8732 ggcggcgccggcggccggag 8751
>dbj|AK001105.1| Homo sapiens cDNA FLJ10243 fis, clone HEMBB1000631, weakly similar to LONGEVITY-ASSURANCE PROTEIN 1 Length = 2083 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||||||||||| || ||||||||| Sbjct: 58 ggcggcgccggcggctggcggaggaggg 85
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ggaggaggggaggtgaggag 78 |||||||||||||||||||| Sbjct: 25210 ggaggaggggaggtgaggag 25229
>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence Length = 143792 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 70651 cgccggcggccggaggagga 70670
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 3467150 ggcggcgccggcggccggag 3467131
>dbj|AK080300.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630042M01 product:unclassifiable, full insert sequence Length = 2455 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||| ||||||| |||||||||||| Sbjct: 764 ggcggcggcggcggcgggaggaggaggg 737
>gb|AC026422.5| Homo sapiens chromosome 5 clone CTD-2169H9, complete sequence Length = 67542 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 33587 cgccggcggccggaggagga 33568
>gb|AF131951.1|AF131951 Rattus norvegicus Shank1a mRNA, complete cds Length = 7087 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggg 68 |||||||||||||||||||| Sbjct: 2842 ggcggccggaggaggagggg 2823
>gb|BC105151.1| Bos taurus cDNA clone MGC:127453 IMAGE:7947054, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 cgccggcggccggaggagga 64 |||||||||||||||||||| Sbjct: 118 cgccggcggccggaggagga 99
>gb|AC154014.4| Mus musculus 6 BAC RP24-409C18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161963 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||| ||||||| |||||||||||| Sbjct: 21956 ggcggcggcggcggcgggaggaggaggg 21929
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||||||||||| |||||||| Sbjct: 11188028 ggcggcgccggcggcgggaggagg 11188051
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 22153317 cggcgccggcggccggagga 22153298 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 19718678 ggcggcggcggcggccggaggagg 19718701 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 4201468 ggcggcgccggcggccggag 4201487
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ccccgagaccgacgcccacgccga 199 ||||||||||||||||| |||||| Sbjct: 22918938 ccccgagaccgacgcccccgccga 22918915
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 25381355 ggaggaggaggggtggtggggagcgagc 25381382
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 9867028 cggcgccggcggccggagga 9867047 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 1344787 ggcggcgccggcggccggag 1344768
>gb|AC092122.5| Homo sapiens chromosome 16 clone RP11-102F12, complete sequence Length = 174809 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 gaggaggggaggtgaggagc 79 |||||||||||||||||||| Sbjct: 60399 gaggaggggaggtgaggagc 60418
>gb|AF159046.1|AF159046 Rattus norvegicus SPANK-1 mRNA, complete cds Length = 7585 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggg 68 |||||||||||||||||||| Sbjct: 2945 ggcggccggaggaggagggg 2926
>gb|AC144788.3| Ornithorhynchus anatinus clone OA_Bb-63M19, complete sequence Length = 122867 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cggcggccggaggaggaggg 67 |||||||||||||||||||| Sbjct: 106550 cggcggccggaggaggaggg 106569
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 agaccgacgcccacgccgac 200 |||||||||||||||||||| Sbjct: 6619543 agaccgacgcccacgccgac 6619562
>gb|AE004910.1| Pseudomonas aeruginosa PAO1, section 471 of 529 of the complete genome Length = 14999 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ccgacgagagcaaggccatc 215 |||||||||||||||||||| Sbjct: 3266 ccgacgagagcaaggccatc 3247
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 131278 cggcgccggcggccggagga 131297
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 2794 cggcgccggcggccggagga 2813
>dbj|AP005606.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1590_E05 Length = 148205 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 101091 ggcggcgccggcggccggag 101110
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 ccgagaccgacgcccacgccgacg 201 ||||||||||| |||||||||||| Sbjct: 2021138 ccgagaccgacacccacgccgacg 2021161
>dbj|AP004855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1538_H05 Length = 132282 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 50831 ggaggaggaggggtggtggggagcgagc 50858
>dbj|AP003233.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0037C04 Length = 137879 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 42838 ggcggcgccggcggccggag 42819
>dbj|AP003046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0445D12 Length = 140952 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 138441 ggcggcgccggcggccggag 138422
>dbj|AP005384.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_D02 Length = 112773 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ggccggaggaggaggggagg 71 |||||||||||||||||||| Sbjct: 5054 ggccggaggaggaggggagg 5035
>dbj|AP004775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0451A10 Length = 137046 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggggagg 71 ||||||| |||||| |||||||||||| |||| Sbjct: 75325 ggcggcggcggcgggcggaggaggaggcgagg 75356
>dbj|AP003763.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0531C01 Length = 158574 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 ccgagaccgacgcccacgccgacg 201 |||||||||||||| ||||||||| Sbjct: 87270 ccgagaccgacgccgacgccgacg 87247
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ccccgagaccgacgcccacgccga 199 ||||||||||||||||| |||||| Sbjct: 112205 ccccgagaccgacgcccccgccga 112182
>dbj|AP005689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042H24 Length = 186313 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||||||||||| |||||||| Sbjct: 23200 ggcggcgccggcggcgggaggagg 23223
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||||||||||| |||||||| Sbjct: 146835 ggcggcgccggcggcgggaggagg 146858
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 6.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 32 tcacccgaggcggcgccggcggccggaggaggaggggagg 71 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 50967 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 51005
>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1202_E07 Length = 145014 Score = 40.1 bits (20), Expect = 6.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Plus Query: 32 tcacccgaggcggcgccggcggccggaggaggaggggagg 71 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 134273 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 134311
>dbj|AP004092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1568_B05 Length = 115325 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ggccggaggaggaggggagg 71 |||||||||||||||||||| Sbjct: 103139 ggccggaggaggaggggagg 103120
>gb|AE005067.1| Halobacterium sp. NRC-1 section 98 of 170 of the complete genome Length = 9980 Score = 40.1 bits (20), Expect = 6.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 17 caccgccgcagcggctcacccgaggcggcgccggcggccg 56 |||||||| |||| ||||| | ||||||||||||||||| Sbjct: 9148 caccgccggagcgtgtcaccggcggcggcgccggcggccg 9187
>dbj|AP005469.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0040I22 Length = 134273 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggaggaggggagg 71 ||||||| |||||| |||||||||||| |||| Sbjct: 121074 ggcggcggcggcgggcggaggaggaggcgagg 121105
>dbj|AP005158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0007M04 Length = 176293 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 47629 ggcggcggcggcggccggaggagg 47652
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 116280 cggcgccggcggccggagga 116261
>dbj|AK120058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C08, full insert sequence Length = 3734 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 ggaggaggaggggaggtgaggagcgagc 83 ||||||||||||| |||| ||||||||| Sbjct: 301 ggaggaggaggggtggtggggagcgagc 328
>dbj|AK119444.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-C11, full insert sequence Length = 2949 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 1324 cggcgccggcggccggagga 1343
>dbj|AK108298.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-E09, full insert sequence Length = 1190 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggggagg 71 ||||||| |||||| |||||||||||| |||| Sbjct: 83 ggcggcggcggcgggcggaggaggaggcgagg 52
>dbj|AK104578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B02, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 72 ggcggcggcggcggccggaggagg 49
>dbj|AK102726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105M03, full insert sequence Length = 938 Score = 40.1 bits (20), Expect = 6.5 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 37 cgaggcggcgccggcggccggaggaggagggg 68 |||||||||| ||||||| ||||||||||||| Sbjct: 355 cgaggcggcggcggcggc-ggaggaggagggg 385
>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full insert sequence Length = 3200 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ccccgagaccgacgcccacgccga 199 ||||||||||||||||| |||||| Sbjct: 156 ccccgagaccgacgcccccgccga 179
>dbj|AK099367.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M06, full insert sequence Length = 983 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 78 ggcggcggcggcggccggaggagg 55
>dbj|AK069153.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007J18, full insert sequence Length = 1816 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 cggcgccggcggccggagga 61 |||||||||||||||||||| Sbjct: 950 cggcgccggcggccggagga 931
>dbj|AK067708.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118H02, full insert sequence Length = 2031 Score = 40.1 bits (20), Expect = 6.5 Identities = 36/40 (90%), Gaps = 1/40 (2%) Strand = Plus / Minus Query: 32 tcacccgaggcggcgccggcggccggaggaggaggggagg 71 ||||| ||||||||| |||||| |||||||||||||||| Sbjct: 676 tcaccagaggcggcggcggcgga-ggaggaggaggggagg 638
>dbj|AK065335.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H01, full insert sequence Length = 1724 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||||||||||| |||||||| Sbjct: 75 ggcggcgccggcggcgggaggagg 52
>dbj|AK062394.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-D05, full insert sequence Length = 930 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 261 ggcggcgccggcggccggag 280
>dbj|AK059631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-A04, full insert sequence Length = 1096 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggagg 63 ||||||| |||||||||||||||| Sbjct: 74 ggcggcggcggcggccggaggagg 51
>gb|AF102855.2|AF102855 Rattus norvegicus synaptic SAPAP-interacting protein Synamon mRNA, complete cds Length = 6477 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ggcggccggaggaggagggg 68 |||||||||||||||||||| Sbjct: 2830 ggcggccggaggaggagggg 2811
>gb|AF039749.1|AF039749 Anas platyrhynchos carboxypeptidase D mRNA, complete cds Length = 4164 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 ggcgccggcggccggaggaggagg 66 |||| ||||||||||||||||||| Sbjct: 93 ggcggcggcggccggaggaggagg 116
>gb|AC003950.1|AC003950 Homo sapiens chromosome 17, clone hCIT.123_J_14, complete sequence Length = 117621 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 gaaggaggtctacaaggcac 260 |||||||||||||||||||| Sbjct: 17593 gaaggaggtctacaaggcac 17574
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggag 59 |||||||||||||||||||| Sbjct: 1119987 ggcggcgccggcggccggag 1119968
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 ccgaggcggcgccggcggcc 55 |||||||||||||||||||| Sbjct: 3809131 ccgaggcggcgccggcggcc 3809112
>gb|AC154015.3| Mus musculus 6 BAC RP24-194J12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151119 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 40 ggcggcgccggcggccggaggaggaggg 67 ||||||| ||||||| |||||||||||| Sbjct: 134891 ggcggcggcggcggcgggaggaggaggg 134864
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 accgacgcccacgccgacga 202 |||||||||||||||||||| Sbjct: 2868113 accgacgcccacgccgacga 2868132 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,696,238 Number of Sequences: 3902068 Number of extensions: 4696238 Number of successful extensions: 111166 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 107673 Number of HSP's gapped (non-prelim): 3502 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
