Clone Name | bastl04b05 |
---|---|
Clone Library Name | barley_pub |
>DRE2A_ARATH (O82132) Dehydration-responsive element-binding protein 2A (DREB2A| protein) Length = 335 Score = 29.3 bits (64), Expect = 2.5 Identities = 16/47 (34%), Positives = 20/47 (42%) Frame = +1 Query: 1 RRVETDGSKKGIGHGLGRVQTTNCEKSGGRGKATAKTKPRHRRPRHG 141 R+V GSKKG G G + + C G R + K R P G Sbjct: 54 RKVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRG 100
>RV167_YEAST (P39743) Reduced viability upon starvation protein 167| Length = 482 Score = 28.9 bits (63), Expect = 3.2 Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Frame = +2 Query: 101 RRKQSLATAV--PVTGXXXXXXXXXXXXXXXXLYIASTSASASPQGRGEPEHARSHASQP 274 RRK +ATA PV+G Y +T+ S +P G G A S+A+QP Sbjct: 288 RRKYGVATAEGSPVSGASSGVGYGAG-------YDPATATSPTPTGYGYGAAAPSYAAQP 340 Query: 275 AA 280 AA Sbjct: 341 AA 342
>DRE2B_ARATH (O82133) Dehydration-responsive element-binding protein 2B (DREB2B| protein) Length = 330 Score = 28.5 bits (62), Expect = 4.2 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +1 Query: 1 RRVETDGSKKGIGHGLGRVQTTNCEKSGGRGKATAKTKPRHRRPRHG 141 R+V GSKKG G G ++C G R + K R P+ G Sbjct: 53 RKVPAKGSKKGCMKGKGGPDNSHCSFRGVRQRIWGKWVAEIREPKIG 99
>DRE2E_ARATH (O80917) Dehydration-responsive element-binding protein 2E (DREB2E| protein) Length = 244 Score = 28.1 bits (61), Expect = 5.5 Identities = 16/44 (36%), Positives = 19/44 (43%) Frame = +1 Query: 1 RRVETDGSKKGIGHGLGRVQTTNCEKSGGRGKATAKTKPRHRRP 132 RRV+ GSKKG G G + C G R + K R P Sbjct: 45 RRVQAKGSKKGCMRGKGGPENPVCRFRGVRQRVWGKWVAEIREP 88
>UBX_DROPS (P20822) Homeotic protein ultrabithorax (Fragment)| Length = 306 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/36 (33%), Positives = 14/36 (38%) Frame = +1 Query: 31 GIGHGLGRVQTTNCEKSGGRGKATAKTKPRHRRPRH 138 G+G G G NC SG TA H+ H Sbjct: 205 GVGAGAGTAWNANCTISGAAAAQTAAASSLHQASNH 240
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/36 (33%), Positives = 21/36 (58%) Frame = +1 Query: 34 IGHGLGRVQTTNCEKSGGRGKATAKTKPRHRRPRHG 141 +G GLG +TT +++ +GK T+P+ + P G Sbjct: 241 VGKGLGTPKTTELKEAEPQGKDRQGTRPQAQGPGEG 276
>DAZP1_XENLA (Q98SJ2) DAZ-associated protein 1 (Deleted in| azoospermia-associated protein 1) (Proline-rich Vg1 mRNA-binding protein) Length = 360 Score = 27.3 bits (59), Expect = 9.3 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -1 Query: 92 PRPPLFSQFVVCTLPSP*PMP 30 P PP F+ F+V T P P P P Sbjct: 256 PPPPSFAPFLVSTTPGPFPPP 276 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.135 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,336,085 Number of Sequences: 219361 Number of extensions: 590063 Number of successful extensions: 1862 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1861 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)