Clone Name | bastl04b03 |
---|---|
Clone Library Name | barley_pub |
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 37.4 bits (85), Expect = 0.023 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 288 QPASSTPLNDKSDGDALLAFKASLSDQ-RRALAAWNTTTAFCSWPGITCSLKHKRRVTVL 464 Q +SS + K+D +LL+FK + D L+ W+ + C + G+TC RVT + Sbjct: 27 QSSSSDQSSLKTDSLSLLSFKTMIQDDPNNILSNWSPRKSPCQFSGVTCL---GGRVTEI 83 Query: 465 NPTSEGLAG 491 N + GL+G Sbjct: 84 NLSGSGLSG 92
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 37.0 bits (84), Expect = 0.030 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%) Frame = +3 Query: 309 LNDKSDGDALLAFKASLSDQRRALAAWNTTTAF-CSWPGITCS 434 ++ ++GDAL A K SL+D + L +W+ T C+W +TC+ Sbjct: 23 VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCN 65
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 35.0 bits (79), Expect = 0.11 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%) Frame = +3 Query: 285 FQPASSTPLNDKSDGDALLAFKASLSDQRRALAAWNTTTA--FCSWPGITCSLKHKRRVT 458 F +SS ++ S+ +L++FK SL + L++WN +++ C W G+TC L RV Sbjct: 13 FSFSSSAIVDLSSETTSLISFKRSLENPS-LLSSWNVSSSASHCDWVGVTCLL---GRVN 68 Query: 459 VLNPTSEGLAGK 494 L+ S L G+ Sbjct: 69 SLSLPSLSLRGQ 80
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 32.0 bits (71), Expect = 0.95 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%) Frame = +3 Query: 300 STPLNDKSDGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC-SLKHKRRVTVLNPTS 476 S L +++D + LL K SL++ LA+W+ T CSW + C RVT L S Sbjct: 21 SKDLCNQNDKNTLLKIKKSLNNPYH-LASWDPQTDCCSWYCLECGDATVNHRVTALTIFS 79 Query: 477 EGLAGK 494 ++G+ Sbjct: 80 GQISGQ 85
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 32.0 bits (71), Expect = 0.95 Identities = 19/57 (33%), Positives = 30/57 (52%) Frame = +3 Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITCSLKHKRRVTVLNPTSEGLAGK 494 D +AL F A L + +++T C+W GITC+ + RV L ++ L+GK Sbjct: 35 DLEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSGK 91
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC| 2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 32.0 bits (71), Expect = 0.95 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC 431 D LL+FKA+L L W ++T CS+ G++C Sbjct: 43 DSQQLLSFKAALPPTPTLLQNWLSSTGPCSFTGVSC 78
>EX3_HAEIN (P44318) Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III)| (EXO III) Length = 267 Score = 31.6 bits (70), Expect = 1.2 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +3 Query: 15 ADRCLTAPITIYLKAQSEPSAHVPIWS 95 A+RC+ I + ++A +PS H PIW+ Sbjct: 238 AERCVDVGIALDIRAMEKPSDHAPIWA 264
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 31.2 bits (69), Expect = 1.6 Identities = 14/36 (38%), Positives = 21/36 (58%) Frame = +3 Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC 431 D LL+FKA+L L W ++T CS+ G++C Sbjct: 43 DSQQLLSFKAALPPTPTLLQNWLSSTDPCSFTGVSC 78
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%) Frame = +3 Query: 312 NDKSDGDALLAFKASL--SDQRRALAAWNTTTA--FCSWPGITCSLKHKRRVTVLNPTSE 479 +D ++ LLAFK + SD L W + CSW G++CS R+ L+ + Sbjct: 30 DDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSWRGVSCS--DDGRIVGLDLRNS 87 Query: 480 GLAG 491 GL G Sbjct: 88 GLTG 91
>ZN181_PONPY (Q5REF1) Zinc finger protein 181| Length = 615 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312 PY C R CG FCC +H RH + H+ Sbjct: 420 PYEC-RECGK---AFCCSSHLTRHQRIHT 444
>ZN181_HUMAN (Q2M3W8) Zinc finger protein 181 (HHZ181)| Length = 571 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312 PY C R CG FCC +H RH + H+ Sbjct: 376 PYEC-RECGK---AFCCSSHLTRHQRIHT 400
>ZN181_BOVIN (Q2KI58) Zinc finger protein 181| Length = 570 Score = 29.3 bits (64), Expect = 6.2 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312 PY C R CG FCC +H RH + H+ Sbjct: 375 PYEC-RECGK---AFCCSSHLTRHQRIHA 399
>YMP4_CAEEL (Q10948) Hypothetical protein B0361.4| Length = 374 Score = 29.3 bits (64), Expect = 6.2 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 253 LFYYCFCCLTHSNRHHQHHS 312 + +Y C +HS+ HH HHS Sbjct: 10 ILFYNICGASHSSHHHHHHS 29
>K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, component 8C-1| (Low-sulfur keratin) Length = 412 Score = 28.9 bits (63), Expect = 8.1 Identities = 13/35 (37%), Positives = 16/35 (45%) Frame = -3 Query: 458 CNPALVLQAAGDTWPRAESSGCVPRSQCTSLVAQA 354 CNP A G T SS C P + CT V ++ Sbjct: 368 CNPCATTNACGKTITPCISSPCAPAAPCTPCVPRS 402
>AGRN_CHICK (P31696) Agrin (Fragment)| Length = 1955 Score = 28.9 bits (63), Expect = 8.1 Identities = 20/76 (26%), Positives = 29/76 (38%) Frame = +2 Query: 176 HASPLAQGCAHVLQLPAPTLVIGDVASSTTASVALRIPTGIINTTQR*VRRRCLAGLQGK 355 H + A AH+L+ +G ++ A + R PT + TT R R K Sbjct: 1173 HTTASAATTAHILRQDT----VGHPSAKLAAPASTRRPTSTLPTTARRKPTRQPPSTTKK 1228 Query: 356 PERPATCTGCVEHNHC 403 P RP C+ C Sbjct: 1229 PSRPCDSHPCLHGGTC 1244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,199,215 Number of Sequences: 219361 Number of extensions: 1198660 Number of successful extensions: 4214 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 4020 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4197 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3581144924 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)