ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 ... 37 0.023
2BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated rec... 37 0.030
3EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase E... 35 0.11
4PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor (Po... 32 0.95
5PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (... 32 0.95
6BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precurso... 32 0.95
7EX3_HAEIN (P44318) Exodeoxyribonuclease III (EC 3.1.11.2) (Exonu... 32 1.2
8BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11... 31 1.6
9BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 ... 30 3.6
10ZN181_PONPY (Q5REF1) Zinc finger protein 181 29 6.2
11ZN181_HUMAN (Q2M3W8) Zinc finger protein 181 (HHZ181) 29 6.2
12ZN181_BOVIN (Q2KI58) Zinc finger protein 181 29 6.2
13YMP4_CAEEL (Q10948) Hypothetical protein B0361.4 29 6.2
14K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, compo... 29 8.1
15AGRN_CHICK (P31696) Agrin (Fragment) 29 8.1

>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2)
           (Protein VASCULAR HIGHWAY 1)
          Length = 1143

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
 Frame = +3

Query: 288 QPASSTPLNDKSDGDALLAFKASLSDQ-RRALAAWNTTTAFCSWPGITCSLKHKRRVTVL 464
           Q +SS   + K+D  +LL+FK  + D     L+ W+   + C + G+TC      RVT +
Sbjct: 27  QSSSSDQSSLKTDSLSLLSFKTMIQDDPNNILSNWSPRKSPCQFSGVTCL---GGRVTEI 83

Query: 465 NPTSEGLAG 491
           N +  GL+G
Sbjct: 84  NLSGSGLSG 92



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>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1|
           precursor (EC 2.7.11.1) (BRI1-associated receptor kinase
           1) (Somatic embryogenesis receptor-like kinase 3)
          Length = 615

 Score = 37.0 bits (84), Expect = 0.030
 Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
 Frame = +3

Query: 309 LNDKSDGDALLAFKASLSDQRRALAAWNTTTAF-CSWPGITCS 434
           ++  ++GDAL A K SL+D  + L +W+ T    C+W  +TC+
Sbjct: 23  VSGNAEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCN 65



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>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor|
           (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS
           MICROSPOROCYTES1 protein)
          Length = 1192

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = +3

Query: 285 FQPASSTPLNDKSDGDALLAFKASLSDQRRALAAWNTTTA--FCSWPGITCSLKHKRRVT 458
           F  +SS  ++  S+  +L++FK SL +    L++WN +++   C W G+TC L    RV 
Sbjct: 13  FSFSSSAIVDLSSETTSLISFKRSLENPS-LLSSWNVSSSASHCDWVGVTCLL---GRVN 68

Query: 459 VLNPTSEGLAGK 494
            L+  S  L G+
Sbjct: 69  SLSLPSLSLRGQ 80



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>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor|
           (Polygalacturonase-inhibiting protein) (PGIP-1)
          Length = 330

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +3

Query: 300 STPLNDKSDGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC-SLKHKRRVTVLNPTS 476
           S  L +++D + LL  K SL++    LA+W+  T  CSW  + C       RVT L   S
Sbjct: 21  SKDLCNQNDKNTLLKIKKSLNNPYH-LASWDPQTDCCSWYCLECGDATVNHRVTALTIFS 79

Query: 477 EGLAGK 494
             ++G+
Sbjct: 80  GQISGQ 85



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>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)|
           (Phytosulfokine LRR receptor kinase)
          Length = 1008

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +3

Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITCSLKHKRRVTVLNPTSEGLAGK 494
           D +AL  F A L  +       +++T  C+W GITC+  +  RV  L   ++ L+GK
Sbjct: 35  DLEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSGK 91



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>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC|
           2.7.11.1) (tBRI1) (Altered brassinolide sensitivity 1)
           (Systemin receptor SR160)
          Length = 1207

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC 431
           D   LL+FKA+L      L  W ++T  CS+ G++C
Sbjct: 43  DSQQLLSFKAALPPTPTLLQNWLSSTGPCSFTGVSC 78



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>EX3_HAEIN (P44318) Exodeoxyribonuclease III (EC 3.1.11.2) (Exonuclease III)|
           (EXO III)
          Length = 267

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +3

Query: 15  ADRCLTAPITIYLKAQSEPSAHVPIWS 95
           A+RC+   I + ++A  +PS H PIW+
Sbjct: 238 AERCVDVGIALDIRAMEKPSDHAPIWA 264



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>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)|
           (Brassinosteroid LRR receptor kinase)
          Length = 1207

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +3

Query: 324 DGDALLAFKASLSDQRRALAAWNTTTAFCSWPGITC 431
           D   LL+FKA+L      L  W ++T  CS+ G++C
Sbjct: 43  DSQQLLSFKAALPPTPTLLQNWLSSTDPCSFTGVSC 78



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>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC|
           2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1)
          Length = 1166

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
 Frame = +3

Query: 312 NDKSDGDALLAFKASL--SDQRRALAAWNTTTA--FCSWPGITCSLKHKRRVTVLNPTSE 479
           +D ++   LLAFK +   SD    L  W   +    CSW G++CS     R+  L+  + 
Sbjct: 30  DDFNETALLLAFKQNSVKSDPNNVLGNWKYESGRGSCSWRGVSCS--DDGRIVGLDLRNS 87

Query: 480 GLAG 491
           GL G
Sbjct: 88  GLTG 91



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>ZN181_PONPY (Q5REF1) Zinc finger protein 181|
          Length = 615

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312
           PY C R CG     FCC +H  RH + H+
Sbjct: 420 PYEC-RECGK---AFCCSSHLTRHQRIHT 444



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>ZN181_HUMAN (Q2M3W8) Zinc finger protein 181 (HHZ181)|
          Length = 571

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312
           PY C R CG     FCC +H  RH + H+
Sbjct: 376 PYEC-RECGK---AFCCSSHLTRHQRIHT 400



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>ZN181_BOVIN (Q2KI58) Zinc finger protein 181|
          Length = 570

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = +1

Query: 226 PYSCHRRCGLFYYCFCCLTHSNRHHQHHS 312
           PY C R CG     FCC +H  RH + H+
Sbjct: 375 PYEC-RECGK---AFCCSSHLTRHQRIHA 399



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>YMP4_CAEEL (Q10948) Hypothetical protein B0361.4|
          Length = 374

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 253 LFYYCFCCLTHSNRHHQHHS 312
           + +Y  C  +HS+ HH HHS
Sbjct: 10  ILFYNICGASHSSHHHHHHS 29



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>K1M1_SHEEP (P02534) Keratin, type I microfibrillar 48 kDa, component 8C-1|
           (Low-sulfur keratin)
          Length = 412

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = -3

Query: 458 CNPALVLQAAGDTWPRAESSGCVPRSQCTSLVAQA 354
           CNP     A G T     SS C P + CT  V ++
Sbjct: 368 CNPCATTNACGKTITPCISSPCAPAAPCTPCVPRS 402



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>AGRN_CHICK (P31696) Agrin (Fragment)|
          Length = 1955

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/76 (26%), Positives = 29/76 (38%)
 Frame = +2

Query: 176  HASPLAQGCAHVLQLPAPTLVIGDVASSTTASVALRIPTGIINTTQR*VRRRCLAGLQGK 355
            H +  A   AH+L+       +G  ++   A  + R PT  + TT R    R       K
Sbjct: 1173 HTTASAATTAHILRQDT----VGHPSAKLAAPASTRRPTSTLPTTARRKPTRQPPSTTKK 1228

Query: 356  PERPATCTGCVEHNHC 403
            P RP     C+    C
Sbjct: 1229 PSRPCDSHPCLHGGTC 1244


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,199,215
Number of Sequences: 219361
Number of extensions: 1198660
Number of successful extensions: 4214
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4197
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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