ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bastl04b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_477951.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
4dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
5dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
6gb|AC153645.4| Mus musculus BAC clone RP24-534E8 from chromosome... 44 0.44
7gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosom... 44 0.44
8dbj|AK028988.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 44 0.44
9emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-5... 44 0.44
10ref|NM_204490.1| Gallus gallus heparan sulfate 6-O-sulfotransfer... 42 1.7
11gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Ca... 42 1.7
12gb|AC022773.17| Mus musculus chromosome X, clone RP23-157B8, com... 42 1.7
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AB071190.1| Gallus gallus Hs6st-2 mRNA for heparan sulfate 6... 42 1.7
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
16emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
17emb|AL713929.5|CNS07YP6 Oryza sativa chromosome 12, . BAC OSJNBb... 42 1.7
18gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, compl... 42 1.7
19emb|AL731832.13| Mouse DNA sequence from clone RP23-180N10 on ch... 42 1.7
20ref|NM_187313.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
21gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
22gb|AF377694.1| Tripsacum dactyloides globulin 1 gene, partial cds 40 6.8
23gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
24gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complet... 40 6.8
25gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 40 6.8
26emb|AJ719919.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.8
27emb|AJ719819.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.8
28ref|NM_001012835.1| Gallus gallus guanine nucleotide binding pro... 40 6.8
29gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Canc... 40 6.8
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
32dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
33gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome... 40 6.8
34dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
35dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
36dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
37dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
38dbj|AK109450.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
39dbj|AK107266.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
40dbj|AK064089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
41gb|AE015924.1| Porphyromonas gingivalis W83, complete genome 40 6.8
42gb|AF064235.1|AF064235 Tripsacum dactyloides line 2065 globulin-... 40 6.8
43gb|AF064234.1|AF064234 Tripsacum dactyloides line 2065 globulin-... 40 6.8
44gb|AF064233.1|AF064233 Tripsacum dactyloides line 2061 globulin-... 40 6.8
45gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
46emb|AL929025.14| Mouse DNA sequence from clone RP23-288B11 on ch... 40 6.8
47emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chr... 40 6.8 
>ref|XM_477951.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 897

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 131 tccgagcccctccgccgccgccg 153
           |||||||||||||||||||||||
Sbjct: 538 tccgagcccctccgccgccgccg 560
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 131      tccgagcccctccgccgccgccg 153
                |||||||||||||||||||||||
Sbjct: 15851969 tccgagcccctccgccgccgccg 15851991



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 142      ccgccgccgccggcccttcttctc 165
                ||||||||||||||||| ||||||
Sbjct: 17397162 ccgccgccgccggccctccttctc 17397139
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 131     tccgagcccctccgccgccgccg 153
               |||||||||||||||||||||||
Sbjct: 6549165 tccgagcccctccgccgccgccg 6549187
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>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0027N13
          Length = 179669

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 131   tccgagcccctccgccgccgccg 153
             |||||||||||||||||||||||
Sbjct: 91483 tccgagcccctccgccgccgccg 91505
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>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1307A11
          Length = 131538

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 131    tccgagcccctccgccgccgccg 153
              |||||||||||||||||||||||
Sbjct: 109778 tccgagcccctccgccgccgccg 109800
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>gb|AC153645.4| Mus musculus BAC clone RP24-534E8 from chromosome 13, complete sequence
          Length = 182805

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 419    aggtatcacctgcagcctgaagcaca 444
              |||||||||||||||||||| |||||
Sbjct: 135709 aggtatcacctgcagcctgaggcaca 135734
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>gb|AC135667.5| Mus musculus BAC clone RP24-536G18 from chromosome 13, complete
             sequence
          Length = 166185

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 419   aggtatcacctgcagcctgaagcaca 444
             |||||||||||||||||||| |||||
Sbjct: 21854 aggtatcacctgcagcctgaggcaca 21879
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>dbj|AK028988.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732479B03 product:hypothetical protein,
            full insert sequence
          Length = 3151

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 419  aggtatcacctgcagcctgaagcaca 444
            |||||||||||||||||||| |||||
Sbjct: 2103 aggtatcacctgcagcctgaggcaca 2128
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>emb|AL928654.1|CNS08CBD Human chromosome 14 DNA sequence BAC R-521B24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 211509

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 136   gcccctccgccgccgccggccc 157
             ||||||||||||||||||||||
Sbjct: 98428 gcccctccgccgccgccggccc 98449
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>ref|NM_204490.1| Gallus gallus heparan sulfate 6-O-sulfotransferase 2 (HS6ST2), mRNA
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 136 gcccctccgccgccgccggcc 156
           |||||||||||||||||||||
Sbjct: 34  gcccctccgccgccgccggcc 14
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>gb|AC090681.13| Homo sapiens 12 BAC RP11-369C14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 93582

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 137   cccctccgccgccgccggccc 157
             |||||||||||||||||||||
Sbjct: 65472 cccctccgccgccgccggccc 65452
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>gb|AC022773.17| Mus musculus chromosome X, clone RP23-157B8, complete sequence
          Length = 212031

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   tggaacacaaccactgctttc 407
             |||||||||||||||||||||
Sbjct: 64311 tggaacacaaccactgctttc 64291
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      tccgagcccctccgccgccgc 151
                |||||||||||||||||||||
Sbjct: 13582536 tccgagcccctccgccgccgc 13582516
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>dbj|AB071190.1| Gallus gallus Hs6st-2 mRNA for heparan sulfate
           6-O-sulfotransferase-2, complete cds
          Length = 1638

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 136 gcccctccgccgccgccggcc 156
           |||||||||||||||||||||
Sbjct: 34  gcccctccgccgccgccggcc 14
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 131      tccgagcccctccgccgccgc 151
                |||||||||||||||||||||
Sbjct: 13536810 tccgagcccctccgccgccgc 13536790
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>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 154442

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 131  tccgagcccctccgccgccgc 151
            |||||||||||||||||||||
Sbjct: 2703 tccgagcccctccgccgccgc 2723
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>emb|AL713929.5|CNS07YP6 Oryza sativa chromosome 12, . BAC OSJNBb0029H23 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 119798

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 131    tccgagcccctccgccgccgc 151
              |||||||||||||||||||||
Sbjct: 114688 tccgagcccctccgccgccgc 114708
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>gb|AC142100.3| Mus musculus BAC clone RP24-366C18 from 18, complete sequence
          Length = 175110

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   tccagctcccggcccctactc 233
             |||||||||||||||||||||
Sbjct: 38845 tccagctcccggcccctactc 38865
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>emb|AL731832.13| Mouse DNA sequence from clone RP23-180N10 on chromosome X, complete
             sequence
          Length = 144400

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 387   tggaacacaaccactgctttc 407
             |||||||||||||||||||||
Sbjct: 83550 tggaacacaaccactgctttc 83530
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>ref|NM_187313.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 447

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 142 ccgccgccgccggcccttcttctc 165
           ||||||||||||||||| ||||||
Sbjct: 212 ccgccgccgccggccctccttctc 189
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>gb|AC136378.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0047D03, complete sequence
          Length = 126165

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 429   tgcagcctgaagcacaagcgcagggttacagtgcttaacc 468
             |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 78811 tgcagccttaagcataaacacagggtcacagtgcttaacc 78850
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>gb|AF377694.1| Tripsacum dactyloides globulin 1 gene, partial cds
          Length = 1063

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 gccgccgccggcccttcttctcct 167
           ||||||||||| ||||||||||||
Sbjct: 481 gccgccgccggtccttcttctcct 458
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>gb|AC136787.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0052B22, complete sequence
          Length = 156725

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 429   tgcagcctgaagcacaagcgcagggttacagtgcttaacc 468
             |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 13312 tgcagccttaagcataaacacagggtcacagtgcttaacc 13351
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>gb|AC122226.3| Mus musculus BAC clone RP23-131F7 from 5, complete sequence
          Length = 193861

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   cccctccgccgccgccggcc 156
             ||||||||||||||||||||
Sbjct: 18643 cccctccgccgccgccggcc 18624
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 395    aaccactgctttctgctcgt 414
              ||||||||||||||||||||
Sbjct: 809587 aaccactgctttctgctcgt 809568
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>emb|AJ719919.1| Gallus gallus mRNA for hypothetical protein, clone 8d24
          Length = 4509

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 cccctccgccgccgccggcccttc 160
           ||||||||||||||||| ||||||
Sbjct: 173 cccctccgccgccgccgccccttc 196
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>emb|AJ719819.1| Gallus gallus mRNA for hypothetical protein, clone 6n13
          Length = 3090

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 cccctccgccgccgccggcccttc 160
           ||||||||||||||||| ||||||
Sbjct: 173 cccctccgccgccgccgccccttc 196
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>ref|NM_001012835.1| Gallus gallus guanine nucleotide binding protein (G protein), beta
           polypeptide 1 (GNB1), mRNA
          Length = 4509

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 137 cccctccgccgccgccggcccttc 160
           ||||||||||||||||| ||||||
Sbjct: 173 cccctccgccgccgccgccccttc 196
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>gb|AC154002.8| Mus musculus 6 BAC RP24-239G21 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 188768

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 344   cttcaaggcaagcctgagcgacca 367
             ||||||||||||||||||| ||||
Sbjct: 53067 cttcaaggcaagcctgagctacca 53090
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 429      tgcagcctgaagcacaagcgcagggttacagtgcttaacc 468
                |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 16697697 tgcagccttaagcataaacacagggtcacagtgcttaacc 16697736
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 136      gcccctccgccgccgccggc 155
                ||||||||||||||||||||
Sbjct: 20256601 gcccctccgccgccgccggc 20256582
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 136      gcccctccgccgccgccggcccttcttc 163
                ||||| |||||||||||| |||||||||
Sbjct: 28691753 gccccgccgccgccgccgccccttcttc 28691780
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>gb|AC155173.3| Mus musculus BAC clone RP23-72O23 from chromosome 5, complete sequence
          Length = 245443

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   cccctccgccgccgccggcc 156
             ||||||||||||||||||||
Sbjct: 33813 cccctccgccgccgccggcc 33832
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>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0434A03
          Length = 146505

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 142   ccgccgccgccggcccttcttctc 165
             ||||||||||||||||| ||||||
Sbjct: 65386 ccgccgccgccggccctccttctc 65363
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>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0622F03
          Length = 170064

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 136   gcccctccgccgccgccggcccttcttc 163
             ||||| |||||||||||| |||||||||
Sbjct: 92319 gccccgccgccgccgccgccccttcttc 92346
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   gcccctccgccgccgccggc 155
             ||||||||||||||||||||
Sbjct: 35728 gcccctccgccgccgccggc 35709
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0047P18
          Length = 169128

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    gcccctccgccgccgccggc 155
              ||||||||||||||||||||
Sbjct: 150101 gcccctccgccgccgccggc 150082
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>dbj|AK109450.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-F08, full
           insert sequence
          Length = 1535

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 gcccctccgccgccgccggcccttcttc 163
           ||||| |||||||||||| |||||||||
Sbjct: 533 gccccgccgccgccgccgccccttcttc 506
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>dbj|AK107266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H06, full
           insert sequence
          Length = 1836

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 cgctcaaggctgtgcgcacg 209
           ||||||||||||||||||||
Sbjct: 648 cgctcaaggctgtgcgcacg 667
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>dbj|AK064089.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-D02, full
           insert sequence
          Length = 1276

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 136 gcccctccgccgccgccggcccttcttc 163
           ||||| |||||||||||| |||||||||
Sbjct: 274 gccccgccgccgccgccgccccttcttc 247
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>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
          Length = 2343476

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 313     acgataagtccgacggcgat 332
               ||||||||||||||||||||
Sbjct: 1665637 acgataagtccgacggcgat 1665618
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>gb|AF064235.1|AF064235 Tripsacum dactyloides line 2065 globulin-1 gene, allele b, partial
           cds
          Length = 1139

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 gccgccgccggcccttcttctcct 167
           ||||||||||| ||||||||||||
Sbjct: 522 gccgccgccggtccttcttctcct 499
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>gb|AF064234.1|AF064234 Tripsacum dactyloides line 2065 globulin-1 gene, allele a, partial
           cds
          Length = 1132

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 gccgccgccggcccttcttctcct 167
           ||||||||||| ||||||||||||
Sbjct: 515 gccgccgccggtccttcttctcct 492
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>gb|AF064233.1|AF064233 Tripsacum dactyloides line 2061 globulin-1 gene, partial cds
          Length = 1104

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 144 gccgccgccggcccttcttctcct 167
           ||||||||||| ||||||||||||
Sbjct: 515 gccgccgccggtccttcttctcct 492
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                        
Query: 429      tgcagcctgaagcacaagcgcagggttacagtgcttaacc 468
                |||||||| ||||| || | |||||| |||||||||||||
Sbjct: 16791520 tgcagccttaagcataaacacagggtcacagtgcttaacc 16791559
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>emb|AL929025.14| Mouse DNA sequence from clone RP23-288B11 on chromosome 2, complete
             sequence
          Length = 81735

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 386   gtggaacacaaccactgctttctg 409
             ||||||||||||||||| ||||||
Sbjct: 78786 gtggaacacaaccactgttttctg 78763
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>emb|AL591882.12| Mouse DNA sequence from clone RP23-53L16 on chromosome 2, complete
              sequence
          Length = 251814

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 425    cacctgcagcctgaagcaca 444
              ||||||||||||||||||||
Sbjct: 110204 cacctgcagcctgaagcaca 110185


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,724,588
Number of Sequences: 3902068
Number of extensions: 3724588
Number of successful extensions: 99288
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98275
Number of HSP's gapped (non-prelim): 1013
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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